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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912336
Clone id YMU001_000017_H08
Library
Length 357
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000017_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCAGAGGCATGTGCGGGTACCACTGCATTGGTTTCTACATCCAACGGGGGTGGGGGTGC
TTCTTCAAGACAAACTTGATCTGGTGCTCAACCTAATTGGCCTGACATCATTGATACCTA
TTGTGGAAAGTAAGGTCATTGGGCAGCCAAATGTTATAAACGACGGCGGGATCGCAAGAA
GGATTCAGATTCTGATGACGATGGGCACCTCCTTGACAGACGACTGCTACCACCATCTCT
GCCCCCTCACCAGGCGATGGTATCTGTCTCTAGCATCACTACACCTTCTTCCTCCTCATG
ACAGAGATCATTTTGGCTCAGAGTTTGCTAGCTCCTTGCTTTGGCAGCCTACTTCTT
■■Homology search results ■■ -
sp_hit_id A0A1F4
Definition sp|A0A1F4|EYS_DROME Protein eyes shut OS=Drosophila melanogaster
Align length 51
Score (bit) 29.3
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912336|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_H08.
         (342 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A0A1F4|EYS_DROME Protein eyes shut OS=Drosophila melanogaster...    29   6.4  
sp|Q8NJJ3|ATG4_PICPA Probable cysteine protease ATG4 OS=Pichia p...    29   8.3  

>sp|A0A1F4|EYS_DROME Protein eyes shut OS=Drosophila melanogaster
            GN=eys PE=1 SV=1
          Length = 2176

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -2

Query: 257  SPGEGAEMVVAVVCQGGAHRHQNLNPSCDPAVVYNIWLPNDLTFHNRYQ*C 105
            SPG G+ M V  +   G H   N N            LP+DL  H+ +Q C
Sbjct: 1476 SPGSGSRMDVLPILYLGGHEIANFNT-----------LPHDLPLHSGFQGC 1515


>sp|Q8NJJ3|ATG4_PICPA Probable cysteine protease ATG4 OS=Pichia
           pastoris GN=ATG4 PE=3 SV=1
          Length = 533

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   LRGMCGYHCIGFYIQRGWGCFFKTN 75
           LRG   ++ IGF    GWGC  +T+
Sbjct: 99  LRGQFDFNEIGFTSDAGWGCMIRTS 123
tr_hit_id B1XJN3
Definition tr|B1XJN3|B1XJN3_SYNP2 Probable exonuclease OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)
Align length 22
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912336|Adiantum capillus-veneris mRNA, clone:
YMU001_000017_H08.
         (342 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1XJN3|B1XJN3_SYNP2 Probable exonuclease OS=Synechococcus sp....    36   1.1  
tr|B0JID3|B0JID3_MICAN Exonuclease OS=Microcystis aeruginosa (st...    35   1.9  
tr|A8YMH0|A8YMH0_MICAE Similar to tr|Q55661|Q55661 OS=Microcysti...    35   1.9  
tr|A3IVB4|A3IVB4_9CHRO Putative uncharacterized protein OS=Cyano...    35   1.9  
tr|Q74DI4|Q74DI4_GEOSL Heavy metal efflux pump, CzcA family OS=G...    35   2.4  
tr|A5K2B3|A5K2B3_PLAVI Putative uncharacterized protein OS=Plasm...    35   2.4  
tr|Q39VE3|Q39VE3_GEOMG Heavy metal efflux pump CzcA OS=Geobacter...    34   3.2  
tr|B4VLQ1|B4VLQ1_9CYAN Nuclease SbcCD, D subunit subfamily, puta...    34   3.2  
tr|B5EDI0|B5EDI0_GEOBB Heavy metal efflux pump, CzcA family OS=G...    34   4.2  
tr|Q4BXJ7|Q4BXJ7_CROWT Exonuclease SbcD OS=Crocosphaera watsonii...    34   4.2  
tr|B3L7C6|B3L7C6_PLAKH Ubiquitin-transferase, putative OS=Plasmo...    34   4.2  
tr|A0R7N2|A0R7N2_PELPD Heavy metal efflux pump, CzcA family OS=P...    33   5.5  
tr|Q0YN77|Q0YN77_9DELT Heavy metal efflux pump CzcA OS=Geobacter...    33   5.5  
tr|B7JZX0|B7JZX0_SYNP8 Nuclease SbcCD, D subunit OS=Synechococcu...    33   9.3  
tr|B4C4V5|B4C4V5_9CHRO Nuclease SbcCD, D subunit OS=Cyanothece s...    33   9.3  

>tr|B1XJN3|B1XJN3_SYNP2 Probable exonuclease OS=Synechococcus sp.
           (strain ATCC 27264 / PCC 7002 / PR-6) GN=sbcD PE=4 SV=1
          Length = 408

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 221 VCQGGAHRHQNLNPSCDPAVVY 156
           V  G  HRHQNLNPS DP ++Y
Sbjct: 227 VALGHVHRHQNLNPSNDPPIIY 248


>tr|B0JID3|B0JID3_MICAN Exonuclease OS=Microcystis aeruginosa
           (strain NIES-843) GN=sbcD PE=4 SV=1
          Length = 417

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 221 VCQGGAHRHQNLNPSCDPAVVY 156
           V  G  H+HQNLNPS DP +VY
Sbjct: 227 VALGHVHKHQNLNPSNDPPIVY 248


>tr|A8YMH0|A8YMH0_MICAE Similar to tr|Q55661|Q55661 OS=Microcystis
           aeruginosa PCC 7806 GN=IPF_3790 PE=4 SV=1
          Length = 417

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 221 VCQGGAHRHQNLNPSCDPAVVY 156
           V  G  H+HQNLNPS DP +VY
Sbjct: 227 VALGHVHKHQNLNPSNDPPIVY 248


>tr|A3IVB4|A3IVB4_9CHRO Putative uncharacterized protein
           OS=Cyanothece sp. CCY 0110 GN=CY0110_08451 PE=4 SV=1
          Length = 406

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 221 VCQGGAHRHQNLNPSCDPAVVY 156
           V  G  H+HQNLNPS DP V+Y
Sbjct: 227 VALGHVHKHQNLNPSNDPPVIY 248


>tr|Q74DI4|Q74DI4_GEOSL Heavy metal efflux pump, CzcA family
           OS=Geobacter sulfurreducens GN=GSU1332 PE=4 SV=1
          Length = 1045

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 111 LIPIVESKVIG-QPNVINDGGIARRIQILMTMGTSLTDDCYHHLCPL 248
           LI  +  K++G   N+++ GGIA  I +L+  G  + ++CY HL  L
Sbjct: 373 LIAFITMKLMGVSSNIMSLGGIAIAIGVLVDAGVIMVENCYRHLSEL 419


>tr|A5K2B3|A5K2B3_PLAVI Putative uncharacterized protein OS=Plasmodium
            vivax GN=PVX_114510 PE=4 SV=1
          Length = 9363

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = -2

Query: 251  GEGAEMVVAVVCQGGAHRHQNLNPSCDPAVVYNIWLPNDLTFHNRYQ*CQAN*VEHQIKF 72
            GE A+ +   VC   A    N  PSCD A  YN    ++  F+  Y  C+ N        
Sbjct: 2364 GENAKQLHKYVCNSKARNFSNSCPSCDSANFYN----DESNFYMNYNFCEKNNDNSNNSI 2419

Query: 71   VLKKHPH 51
            ++K   H
Sbjct: 2420 IMKYSNH 2426


>tr|Q39VE3|Q39VE3_GEOMG Heavy metal efflux pump CzcA OS=Geobacter
           metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
           GN=Gmet_1547 PE=4 SV=1
          Length = 1045

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 111 LIPIVESKVIG-QPNVINDGGIARRIQILMTMGTSLTDDCYHHLCPL 248
           LI  +  K++G   N+++ GGIA  I +L+  G  + ++CY HL  L
Sbjct: 373 LISFITMKLMGVTSNIMSLGGIAIAIGVLVDAGVIMVENCYRHLSEL 419


>tr|B4VLQ1|B4VLQ1_9CYAN Nuclease SbcCD, D subunit subfamily,
           putative OS=Microcoleus chthonoplastes PCC 7420
           GN=MC7420_379 PE=4 SV=1
          Length = 438

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -2

Query: 221 VCQGGAHRHQNLNPSCDPAVVY 156
           V  G  HRHQNLNPS +P V+Y
Sbjct: 227 VALGHVHRHQNLNPSNNPPVIY 248


>tr|B5EDI0|B5EDI0_GEOBB Heavy metal efflux pump, CzcA family
           OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
           DSM 16622) GN=Gbem_2164 PE=4 SV=1
          Length = 1045

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +3

Query: 111 LIPIVESKVIG-QPNVINDGGIARRIQILMTMGTSLTDDCYHHL 239
           LI  +  K++G   N+++ GGIA  I +L+  G  + ++CY HL
Sbjct: 373 LISFITMKLMGVSSNIMSLGGIAIAIGVLVDAGVIMVENCYRHL 416


>tr|Q4BXJ7|Q4BXJ7_CROWT Exonuclease SbcD OS=Crocosphaera watsonii
           GN=CwatDRAFT_1562 PE=4 SV=1
          Length = 406

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -2

Query: 221 VCQGGAHRHQNLNPSCDPAVVY 156
           V  G  H+HQNLNP+ DP V+Y
Sbjct: 227 VALGHVHKHQNLNPNNDPPVIY 248