BP912346 |
Clone id |
YMU001_000018_A08 |
Library |
YMU01 |
Length |
453 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000018_A08. |
Accession |
BP912346 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TAAAATGTAAGGAGGATTAGTCATTCCAATGCGCAACATGACAGATCCATCGTTGGGCAG CTCTGCTACAAGTGCGTGCAAAAGAGTTGGGAGATTGGCTTGAATATCACGTCCATAAGC TCCCGTGTCCTCGCTGCTAAGCCATACTTCTTTGACACCATCAGCAATCACTCACTTCAA CCTCTCTACCAAGGTTGCAACAGGGTAGCTTCCGAGATGACCACGTGCATGCTTAGTCTT ACAGTAGGTGCAAGCGCCTAAACAGCCCACATTTATTGGTAGAATCTCCACGTACTTGTT CTTCCTTACCTGCCGTACATAAACTTTGATGACATTAGGAACAGTTTAAGCCCATTATCA TTATTGGATATTTTTTTACCTTAGGCATATCAAGGGAAGGAAGGGAACTCCTACGAAGAA GTCGTACTTCATGGCCCTTCAAAGTCTCTTCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6PG34 |
Definition |
sp|Q6PG34|CDKAL_DANRE CDK5 regulatory subunit-associated protein 1-like 1 OS=Danio rerio |
Align length |
104 |
Score (bit) |
141.0 |
E-value |
1.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912346|Adiantum capillus-veneris mRNA, clone: YMU001_000018_A08. (453 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6PG34|CDKAL_DANRE CDK5 regulatory subunit-associated protein... 141 1e-33 sp|Q5VV42|CDKAL_HUMAN CDK5 regulatory subunit-associated protein... 139 4e-33 sp|Q91WE6|CDKAL_MOUSE CDK5 regulatory subunit-associated protein... 139 8e-33 sp|Q6P4Y0|CDKAL_XENTR CDK5 regulatory subunit-associated protein... 135 6e-32 sp|Q6NS26|CDKAL_XENLA CDK5 regulatory subunit-associated protein... 135 6e-32 sp|Q291H5|CDKAL_DROPS CDKAL1-like protein OS=Drosophila pseudoob... 129 5e-30 sp|Q7K4W1|CDKAL_DROME CDKAL1-like protein OS=Drosophila melanoga... 129 5e-30 sp|Q8MXQ7|CDKAL_CAEEL CDKAL1-like protein OS=Caenorhabditis eleg... 121 2e-27 sp|Q9UXX9|Y1729_PYRAB Putative methylthiotransferase PYRAB17290 ... 90 4e-18 sp|O59545|Y1875_PYRHO Putative methylthiotransferase PH1875 OS=P... 90 5e-18 sp|O26914|Y826_METTH Putative methylthiotransferase MTH_826 OS=M... 82 8e-16 sp|O29021|Y1247_ARCFU Putative methylthiotransferase AF_1247 OS=... 74 2e-13 sp|Q58277|Y867_METJA Putative methylthiotransferase MJ0867 OS=Me... 67 5e-11 sp|O66638|MIAB_AQUAE (Dimethylallyl)adenosine tRNA methylthiotra... 52 2e-06 sp|P0AEI4|RIMO_ECOLI Ribosomal protein S12 methylthiotransferase... 51 3e-06 sp|P0AEI5|RIMO_ECO57 Ribosomal protein S12 methylthiotransferase... 51 3e-06 sp|Q9WZT7|Y830_THEMA Putative methylthiotransferase TM_0830 OS=T... 47 3e-05 sp|Q9ZDB6|Y416_RICPR Putative methylthiotransferase RP416 OS=Ric... 47 4e-05 sp|Q9CKN9|RIMO_PASMU Ribosomal protein S12 methylthiotransferase... 47 4e-05 sp|Q9WZC1|MIAB_THEMA (Dimethylallyl)adenosine tRNA methylthiotra... 47 5e-05 sp|O66772|Y474_AQUAE Putative methylthiotransferase aq_474 OS=Aq... 46 7e-05 sp|P56130|Y285_HELPY Putative methylthiotransferase HP_0285 OS=H... 45 1e-04 sp|Q9ZMF0|Y285_HELPJ Putative methylthiotransferase jhp_0270 OS=... 45 1e-04 sp|Q49842|MIAB_MYCLE (Dimethylallyl)adenosine tRNA methylthiotra... 45 2e-04 sp|Q89AC2|MIAB_BUCBP (Dimethylallyl)adenosine tRNA methylthiotra... 44 3e-04 sp|P67085|MIAB_MYCTU (Dimethylallyl)adenosine tRNA methylthiotra... 43 6e-04 sp|P67086|MIAB_MYCBO (Dimethylallyl)adenosine tRNA methylthiotra... 43 6e-04 sp|O31778|MIAB_BACSU (Dimethylallyl)adenosine tRNA methylthiotra... 43 6e-04 sp|Q9VGZ1|CK5P1_DROME CDK5RAP1-like protein OS=Drosophila melano... 43 6e-04 sp|O67016|RIMO_AQUAE Ribosomal protein S12 methylthiotransferase... 43 7e-04
>sp|Q6PG34|CDKAL_DANRE CDK5 regulatory subunit-associated protein 1-like 1 OS=Danio rerio GN=cdkal1 PE=2 SV=1 Length = 547
Score = 141 bits (356), Expect = 1e-33 Identities = 68/104 (65%), Positives = 81/104 (77%) Frame = -1
Query: 312 QVRKNKYVEILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSS 133 ++RKN +EI+ IN GCL ACTYCKTKHARG L SYPV LVER++ +GV E+WL+S Sbjct: 193 KIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELVERVRQSFQEGVCEIWLTS 252
Query: 132 EDTGAYGRDIQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 EDTGAYGRDI ++LPTLL LV E+P MLR+GMTNPPYIL Sbjct: 253 EDTGAYGRDIGSDLPTLLWRLVEEIPE--GAMLRLGMTNPPYIL 294
>sp|Q5VV42|CDKAL_HUMAN CDK5 regulatory subunit-associated protein 1-like 1 OS=Homo sapiens GN=CDKAL1 PE=1 SV=1 Length = 579
Score = 139 bits (351), Expect = 4e-33 Identities = 67/104 (64%), Positives = 79/104 (75%) Frame = -1
Query: 312 QVRKNKYVEILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSS 133 ++RKN +EI+ IN GCL ACTYCKTKHARG+L SYP+ LV+R K +GV E+WL+S Sbjct: 198 KIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTS 257
Query: 132 EDTGAYGRDIQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 EDTGAYGRDI NLPTLL LV +P MLR+GMTNPPYIL Sbjct: 258 EDTGAYGRDIGTNLPTLLWKLVEVIPE--GAMLRLGMTNPPYIL 299
>sp|Q91WE6|CDKAL_MOUSE CDK5 regulatory subunit-associated protein 1-like 1 OS=Mus musculus GN=Cdkal1 PE=2 SV=1 Length = 578
Score = 139 bits (349), Expect = 8e-33 Identities = 67/104 (64%), Positives = 79/104 (75%) Frame = -1
Query: 312 QVRKNKYVEILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSS 133 ++RKN +EI+ IN GCL ACTYCKTKHARG+L SYP+ LVER K +GV E+WL+S Sbjct: 197 KIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTS 256
Query: 132 EDTGAYGRDIQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 EDTGAYGRDI +LPTLL LV +P MLR+GMTNPPYIL Sbjct: 257 EDTGAYGRDIGTDLPTLLWKLVEVIPE--GAMLRLGMTNPPYIL 298
>sp|Q6P4Y0|CDKAL_XENTR CDK5 regulatory subunit-associated protein 1-like 1 OS=Xenopus tropicalis GN=cdkal1 PE=2 SV=1 Length = 553
Score = 135 bits (341), Expect = 6e-32 Identities = 66/104 (63%), Positives = 77/104 (74%) Frame = -1
Query: 312 QVRKNKYVEILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSS 133 ++RKN +EI+ IN GCL ACTYCKTKHARG L SYPV LV+R +GV E+WL+S Sbjct: 194 KIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEELVDRAAQSFQEGVCEIWLTS 253
Query: 132 EDTGAYGRDIQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 EDTGAYGRDI +LPTLL LV +P MLR+GMTNPPYIL Sbjct: 254 EDTGAYGRDIGTDLPTLLWKLVEVIPE--GAMLRLGMTNPPYIL 295
>sp|Q6NS26|CDKAL_XENLA CDK5 regulatory subunit-associated protein 1-like 1 OS=Xenopus laevis GN=cdkal1 PE=2 SV=1 Length = 556
Score = 135 bits (341), Expect = 6e-32 Identities = 66/104 (63%), Positives = 77/104 (74%) Frame = -1
Query: 312 QVRKNKYVEILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSS 133 ++RKN +EI+ IN GCL ACTYCKTKHARG L SYPV LV+R +GV E+WL+S Sbjct: 194 KIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEELVDRATQSFQEGVCEIWLTS 253
Query: 132 EDTGAYGRDIQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 EDTGAYGRDI +LPTLL LV +P MLR+GMTNPPYIL Sbjct: 254 EDTGAYGRDIGTDLPTLLWKLVEVIPE--GAMLRLGMTNPPYIL 295
>sp|Q291H5|CDKAL_DROPS CDKAL1-like protein OS=Drosophila pseudoobscura pseudoobscura GN=GA19679 PE=3 SV=1 Length = 553
Score = 129 bits (325), Expect = 5e-30 Identities = 63/104 (60%), Positives = 76/104 (73%) Frame = -1
Query: 312 QVRKNKYVEILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSS 133 +VRKN +EI+ IN GCL CTYCKTKHARG L SYP +V+R + A+G E+WL+S Sbjct: 205 KVRKNPLIEIISINTGCLNQCTYCKTKHARGDLASYPPEEIVDRARQSFAEGCCEIWLTS 264
Query: 132 EDTGAYGRDIQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 EDTGAYGRDI ++LP LL LV +P MLR+GMTNPPYIL Sbjct: 265 EDTGAYGRDIGSSLPELLWKLVEVIPE--HCMLRVGMTNPPYIL 306
Score = 29.6 bits (65), Expect = 6.3 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 8/64 (12%) Frame = -3
Query: 451 EETLKGHEV-------XXXXXXXXXXLDMPKVKKYPIM-IMGLNCS*CHQSLCTAGKEEQ 296 EETLKGH V L +PKV+K P++ I+ +N +Q CT K + Sbjct: 175 EETLKGHSVRLLQNKKVHGRRVAGAPLSLPKVRKNPLIEIISINTGCLNQ--CTYCKTKH 232
Query: 295 VRGD 284 RGD Sbjct: 233 ARGD 236
>sp|Q7K4W1|CDKAL_DROME CDKAL1-like protein OS=Drosophila melanogaster GN=CG6550 PE=2 SV=1 Length = 552
Score = 129 bits (325), Expect = 5e-30 Identities = 64/104 (61%), Positives = 76/104 (73%) Frame = -1
Query: 312 QVRKNKYVEILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSS 133 +VRKN +EI+ IN GCL CTYCKTKHARG L SYP +VER + A+G E+WL+S Sbjct: 205 KVRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPEEVVERARQSFAEGCCEIWLTS 264
Query: 132 EDTGAYGRDIQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 EDTGAYGRDI ++LP LL LV +P MLR+GMTNPPYIL Sbjct: 265 EDTGAYGRDIGSSLPELLWQLVEVIPE--HCMLRVGMTNPPYIL 306
Score = 29.3 bits (64), Expect = 8.2 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 9/65 (13%) Frame = -3
Query: 451 EETLKGHEV--------XXXXXXXXXXLDMPKVKKYPIM-IMGLNCS*CHQSLCTAGKEE 299 EETLKGH V L +PKV+K P++ I+ +N +Q CT K + Sbjct: 174 EETLKGHSVQLLQNKKKVHGRRVAGAPLSLPKVRKNPLIEIISINSGCLNQ--CTYCKTK 231
Query: 298 QVRGD 284 RGD Sbjct: 232 HARGD 236
>sp|Q8MXQ7|CDKAL_CAEEL CDKAL1-like protein OS=Caenorhabditis elegans GN=Y92H12BL.1 PE=2 SV=2 Length = 425
Score = 121 bits (303), Expect = 2e-27 Identities = 64/105 (60%), Positives = 79/105 (75%), Gaps = 1/105 (0%) Frame = -1
Query: 312 QVRKNKYVEILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIAD-GVKEVWLS 136 ++RKN+ +E+L I+ GCL CTYCKTK ARG L SYP+A LVE+ + D GVKE+WL+ Sbjct: 58 KMRKNELIEVLSISTGCLNNCTYCKTKMARGDLVSYPLADLVEQARAAFHDEGVKELWLT 117
Query: 135 SEDTGAYGRDIQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 SED GA+GRDI LP LL LV +P DGS M+R+GMTNPPYIL Sbjct: 118 SEDLGAWGRDIGLVLPDLLRELVKVIP-DGS-MMRLGMTNPPYIL 160
>sp|Q9UXX9|Y1729_PYRAB Putative methylthiotransferase PYRAB17290 OS=Pyrococcus abyssi GN=PYRAB17290 PE=3 SV=1 Length = 425
Score = 90.1 bits (222), Expect = 4e-18 Identities = 47/95 (49%), Positives = 59/95 (62%) Frame = -1
Query: 285 ILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSSEDTGAYGRD 106 I+PI GCL ACTYC T+ ARG L SY +V +K I G KE+WLS+EDTG YG D Sbjct: 141 IVPIAEGCLNACTYCATRFARGVLKSYSPEKIVGWVKWAIKQGYKEIWLSAEDTGCYGFD 200
Query: 105 IQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 I NL LL + A +G +R+GM NP ++L Sbjct: 201 IGTNLAKLLDEITA---IEGEFRVRVGMMNPNHVL 232
>sp|O59545|Y1875_PYRHO Putative methylthiotransferase PH1875 OS=Pyrococcus horikoshii GN=PH1875 PE=3 SV=2 Length = 425
Score = 89.7 bits (221), Expect = 5e-18 Identities = 46/95 (48%), Positives = 59/95 (62%) Frame = -1
Query: 285 ILPINVGCLGACTYCKTKHARGHLGSYPVATLVERLK*VIADGVKEVWLSSEDTGAYGRD 106 ILPI GCL ACTYC T+ ARG L SY ++ +K I G KE+WLS+EDTG YG D Sbjct: 141 ILPIAEGCLNACTYCATRLARGVLKSYSPEKIIGWVKWAIKQGYKEIWLSAEDTGCYGFD 200
Query: 105 IQANLPTLLHALVAELPNDGSVMLRIGMTNPPYIL 1 I NL L+ + A +G +R+GM NP ++L Sbjct: 201 IGTNLAKLIDEITA---IEGEFRIRVGMMNPNHVL 232
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q7H0 |
Definition |
tr|A7Q7H0|A7Q7H0_VITVI Chromosome chr18 scaffold_59, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
104 |
Score (bit) |
177.0 |
E-value |
3.0e-43 |
Report |
|