BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912350|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_A12.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=1       30   4.5  

>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=1
          Length = 5193

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 270  GTTFFQGTLLSLGEASGISVEQEQA*QGRPCGGSLCL*TCRTV 142
            G   FQGT LS  +  GI   QE + Q + C  + C  +C+ V
Sbjct: 3532 GRERFQGTALSFTDTQGIQPLQEYSYQLKACTAAGCAVSCKVV 3574

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912350|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_A12.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q73YW4|Q73YW4_MYCPA Putative uncharacterized protein OS=Mycob...    35   1.9  
tr|Q6G1H1|Q6G1H1_BARQU PH adaptation potassium efflux system g O...    33   7.1  
tr|A9IZS9|A9IZS9_BART1 Na+/H+ antiporter OS=Bartonella tribocoru...    33   7.1  
tr|Q5F3Z8|Q5F3Z8_CHICK Putative uncharacterized protein OS=Gallu...    33   9.3  
tr|A0E0W1|A0E0W1_PARTE Chromosome undetermined scaffold_72, whol...    33   9.3  
tr|A0DKD5|A0DKD5_PARTE Chromosome undetermined scaffold_54, whol...    33   9.3  

>tr|Q73YW4|Q73YW4_MYCPA Putative uncharacterized protein
           OS=Mycobacterium paratuberculosis GN=MAP_1839 PE=4 SV=1
          Length = 609

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +3

Query: 114 IGVVLSEGGALCDKFTGIGILHKVGLV---RLALVQQR 218
           +G  L++GG L D+F G G  H+  LV   RLAL QQR
Sbjct: 456 VGQQLAQGGDLADRFEGAGFHHRQRLVETNRLALAQQR 493


>tr|Q6G1H1|Q6G1H1_BARQU PH adaptation potassium efflux system g
           OS=Bartonella quintana GN=phaG PE=4 SV=1
          Length = 133

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/53 (28%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
 Frame = +3

Query: 159 TGIGILHKVGLVRLALVQQRYHLLPLSSIGFLGKML---YLYAILLEMMFLLH 308
           +G+ ++  +GLVR +   +R H+L +++   +G +L   +LY++L++  F+ H
Sbjct: 21  SGLTLIGTIGLVRFSSFYERLHMLSVAASWGVGSILISSFLYSMLVDHHFVFH 73


>tr|A9IZS9|A9IZS9_BART1 Na+/H+ antiporter OS=Bartonella tribocorum
           (strain CIP 105476 / IBS 506) GN=phaG PE=4 SV=1
          Length = 136

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = +3

Query: 159 TGIGILHKVGLVRLALVQQRYHLLPLSSIGFLGKML---YLYAILLEMMFLLH 308
           +G+ ++  +GLVRL    +R H+L LS+    G +L   +LY+  ++  F+ H
Sbjct: 21  SGLTLIGTIGLVRLPTFYKRLHMLSLSTSWGAGSILIASFLYSTFVDHHFVFH 73


>tr|Q5F3Z8|Q5F3Z8_CHICK Putative uncharacterized protein OS=Gallus
           gallus GN=RCJMB04_4a23 PE=2 SV=1
          Length = 711

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +3

Query: 186 GLVRLALVQQRYHLLPLSSIGFLGKMLYLYAILLEMMFLLHC 311
           GLV + L  Q    L L+++G +GKM+Y+ A+   M  L HC
Sbjct: 542 GLVSIGLQCQHLRTLSLANLGMMGKMVYMSAL---MDMLKHC 580


>tr|A0E0W1|A0E0W1_PARTE Chromosome undetermined scaffold_72, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00022096001 PE=4 SV=1
          Length = 179

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
 Frame = +2

Query: 176 PQGRPCQACSCSTE---IPLASPKLNRV-------PWKNVVPLCNSVRDDVSLAL 310
           PQ   C  C C  E   I +  PK N          W N  PLC S R++V +AL
Sbjct: 122 PQQEDCPICLCQLEQMEIVVQLPKCNHYFHDICIDEWLNAKPLCPSCRNNVRMAL 176


>tr|A0DKD5|A0DKD5_PARTE Chromosome undetermined scaffold_54, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00017831001 PE=4 SV=1
          Length = 179

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
 Frame = +2

Query: 176 PQGRPCQACSCSTE---IPLASPKLNRV-------PWKNVVPLCNSVRDDVSLAL 310
           PQ   C  C C  E   I +  PK N          W N  PLC S R++V +AL
Sbjct: 122 PQPEDCPICLCQLEQEEIVVQLPKCNHYFHDTCIDEWLNAKPLCPSCRNNVRMAL 176