NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912353
Clone id YMU001_000018_B03
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000018_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGACTAGTCCTGCAGGTTAAACGAATCGCCTGAGATATACTGCAGGTACTCGAGAAATTA
GTATATTGAGGAGGTAATTGGGCCAAAAGCTGGATGGCCATGTTCTTTGAATTGATAAGC
TTCCCATATGAAGTATCTCTTGTTGAAGCTCCTGCATCTTGTTGATGTGGATGTTGAAGC
TTTCTCTTTCATCTTGTCAGTGATCCCGCACAAAAGAGTTCTTCGCATCCAGGGTTCTCA
ATTGCACCTCGAGGGCTATTCGCTTCATTGGAGAAAGTTGATCATATAGCGAAGAAAGTT
GATCCCAAATCAACTTCGCGTTTTTCATCAATCGGATGTGACTGATGATTGATGGTGTAC
TGTTGAGGATAATGAAAGACAGGTTTCGAGCGTTGACACACTCCCATAGCTTCGCTCCCA
CAGGGTCCTTTGGCTTTTGAAAGTTTCTTGAAAAGTGACCTAGTACACATATTTAGTAGC
AGAATTGCAAAGAAGTGGAGACTCTAACCAGGGGAAACCCTAAGGAACGAGGGTCTTGC
■■Homology search results ■■ -
sp_hit_id Q95LL8
Definition sp|Q95LL8|CC025_MACFA EF-hand domain-containing protein C3orf25 homolog OS=Macaca fascicularis
Align length 50
Score (bit) 37.7
E-value 0.031
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912353|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B03.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q95LL8|CC025_MACFA EF-hand domain-containing protein C3orf25 ...    38   0.031
sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra...    34   0.45 
sp|Q09779|YATE_SCHPO Uncharacterized protein C1D4.14 OS=Schizosa...    33   0.77 
sp|Q6NXP0|CC025_HUMAN EF-hand domain-containing protein C3orf25 ...    33   0.77 
sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplastic OS=S...    31   3.8  
sp|Q9JLC8|SACS_MOUSE Sacsin OS=Mus musculus GN=Sacs PE=1 SV=2          30   5.0  
sp|Q5TZJ5|F75A1_HUMAN Protein FAM75A1 OS=Homo sapiens GN=FAM75A1...    30   5.0  
sp|Q5VU36|F75A5_HUMAN Protein FAM75A5 OS=Homo sapiens GN=FAM75A5...    30   6.5  
sp|Q4VX67|F75A4_HUMAN Protein FAM75A4 OS=Homo sapiens GN=FAM75A4...    30   6.5  
sp|Q5VYP0|F75A3_HUMAN Protein FAM75A3 OS=Homo sapiens GN=FAM75A3...    30   6.5  
sp|Q60MF5|RN207_CAEBR Probable RING finger protein 207 homolog O...    30   8.5  
sp|A3DBQ2|GPMI_CLOTH 2,3-bisphosphoglycerate-independent phospho...    30   8.5  

>sp|Q95LL8|CC025_MACFA EF-hand domain-containing protein C3orf25
           homolog OS=Macaca fascicularis GN=QtsA-20224 PE=2 SV=1
          Length = 569

 Score = 37.7 bits (86), Expect = 0.031
 Identities = 17/50 (34%), Positives = 31/50 (62%)
 Frame = -2

Query: 161 RESFNIHINKMQELQQEILHMGSLSIQRTWPSSFWPNYLLNILISRVPAV 12
           ++S  +H  + +E  +++    S S+Q+T P+SFWP +LL+ L   +P V
Sbjct: 469 KKSKKMHFKEFEEFTRKLKVRRSSSLQQTHPNSFWPGHLLDKLQLYLPTV 518


>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
           transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
          Length = 1328

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 26/105 (24%), Positives = 48/105 (45%)
 Frame = -2

Query: 410 KPKDPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYDQLSPMKRI 231
           K  D + A+ W  ++ R  S I L+ +  ++++I     A+ IW +L SLY   +   ++
Sbjct: 42  KKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKL 101

Query: 230 ALEVQLRTLDAKNSFVRDH*QDERESFNIHINKMQELQQEILHMG 96
            L+ QL  L             E  +F  H+N    L  ++ ++G
Sbjct: 102 YLKKQLYALH----------MSEGTNFLSHLNVFNGLITQLANLG 136


>sp|Q09779|YATE_SCHPO Uncharacterized protein C1D4.14
            OS=Schizosaccharomyces pombe GN=SPAC1D4.14 PE=1 SV=3
          Length = 1628

 Score = 33.1 bits (74), Expect = 0.77
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
 Frame = -2

Query: 290  KLIWDQLS----------SLYDQLSPMKRIALEV-----QLRTLDAKNSFVRDH*QDERE 156
            K IWD  S          SLYD   P++R   E      Q+R  DA N+F   H  D ++
Sbjct: 966  KQIWDYFSPNFYLTFWKLSLYDVFVPLERYEFERSRAFDQIRQTDAANTFYSRHRHDRQK 1025

Query: 155  SFNIHINKMQELQQEILHMGSL 90
               +  +   EL++ I  + S+
Sbjct: 1026 IMQLSNSLQNELKEHINSLESV 1047


>sp|Q6NXP0|CC025_HUMAN EF-hand domain-containing protein C3orf25
           OS=Homo sapiens GN=C3orf25 PE=2 SV=1
          Length = 572

 Score = 33.1 bits (74), Expect = 0.77
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = -2

Query: 161 RESFNIHINKMQELQQEILHMGSLSIQRTWPSSFWPNYLLNILISRVPAV 12
           ++S  +   + +E  +++    S  +Q+T P+SFWP +LL+ L   +P V
Sbjct: 472 KKSKKMRFKEFEEFTRKLKVKRSSGLQQTHPNSFWPGHLLDKLQLYLPTV 521


>sp|O49937|RK4_SPIOL 50S ribosomal protein L4, chloroplastic
           OS=Spinacia oleracea GN=RPL4 PE=1 SV=1
          Length = 293

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
 Frame = -2

Query: 440 VLGHFSRNFQKPK--DPVGA-KLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQL 270
           V+  F+ NF+KPK  D + A + W    A    F +++   ++    R ++  KL+  + 
Sbjct: 174 VVEEFAENFEKPKTKDFIAAMQRWGLDPAEKSLFFLMDLVENVEKSGRNIRTLKLLTPRS 233

Query: 269 SSLYDQLSPMKRIALEVQLRTLDAKNSFVRDH*QDERE 156
            +L+D L+  K +  E  ++ L+ +        +DE E
Sbjct: 234 LNLFDVLNAEKLVFTEGTIQYLNQRYGVDTLEDEDEEE 271


>sp|Q9JLC8|SACS_MOUSE Sacsin OS=Mus musculus GN=Sacs PE=1 SV=2
          Length = 4582

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -3

Query: 178 ITDKMKEKASTSTSTRCRSFNKRYFIW-EAYQFKEHGHPAFGPITSSIY 35
           I D +K   +  +S    S +  Y +W EA + K H HP  GP+ S ++
Sbjct: 508 ILDSIKRLETEKSSDFPLSVDTIYKLWPEASKVKAHWHPVLGPLFSELF 556


>sp|Q5TZJ5|F75A1_HUMAN Protein FAM75A1 OS=Homo sapiens GN=FAM75A1
           PE=2 SV=1
          Length = 1347

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
 Frame = -2

Query: 353 SFIILNSTPSIISHIRLMKNAKL-IWDQ---LSSLYDQLSPMKRI-ALEVQLRTLDAKNS 189
           S  +L+S       I++ + AK+ IW++   + S  D+++P K + +L    ++LDA+  
Sbjct: 316 SLFLLSSDGQNAVGIQVTETAKVNIWEEKENVGSFTDRMTPEKHLNSLRNLAKSLDAEQD 375

Query: 188 FVRDH*QDERESFNIHINKMQELQQEILHMGSLSIQRTWPSSFWPNY 48
                  + +  +N     M E  +++     LS  R W  SFW NY
Sbjct: 376 TT-----NPKPFWN-----MGENSKQLPGPQKLSDPRLWQESFWKNY 412


>sp|Q5VU36|F75A5_HUMAN Protein FAM75A5 OS=Homo sapiens GN=FAM75A5
           PE=2 SV=1
          Length = 1347

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
 Frame = -2

Query: 353 SFIILNSTPSIISHIRLMKNAKL-IWDQ---LSSLYDQLSPMKRI-ALEVQLRTLDAKNS 189
           S  +L+S    +  I++ + AK+ IW++   + S  ++++P K + +L    ++LDA+  
Sbjct: 316 SLFLLSSDGQNVVGIQVTETAKVNIWEEKENVGSFTNRMTPEKHLNSLRNLAKSLDAEQD 375

Query: 188 FVRDH*QDERESFNIHINKMQELQQEILHMGSLSIQRTWPSSFWPNY 48
                  + +  +N     M E  +++     LS  R W  SFW NY
Sbjct: 376 TT-----NPKPFWN-----MGENSKQLPGPQKLSDPRLWQESFWKNY 412


>sp|Q4VX67|F75A4_HUMAN Protein FAM75A4 OS=Homo sapiens GN=FAM75A4
           PE=3 SV=2
          Length = 1347

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
 Frame = -2

Query: 353 SFIILNSTPSIISHIRLMKNAKL-IWDQ---LSSLYDQLSPMKRI-ALEVQLRTLDAKNS 189
           S  +L+S    +  I++ + AK+ IW++   + S  ++++P K + +L    ++LDA+  
Sbjct: 316 SLFLLSSDGQNVVGIQVTETAKVNIWEEKENVGSFTNRMTPEKHLNSLRNLAKSLDAEQD 375

Query: 188 FVRDH*QDERESFNIHINKMQELQQEILHMGSLSIQRTWPSSFWPNY 48
                  + +  +N     M E  +++     LS  R W  SFW NY
Sbjct: 376 TT-----NPKPFWN-----MGENSKQLPGPQKLSDPRLWQESFWKNY 412


>sp|Q5VYP0|F75A3_HUMAN Protein FAM75A3 OS=Homo sapiens GN=FAM75A3
           PE=2 SV=1
          Length = 1347

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
 Frame = -2

Query: 353 SFIILNSTPSIISHIRLMKNAKL-IWDQ---LSSLYDQLSPMKRI-ALEVQLRTLDAKNS 189
           S  +L+S    +  I++ + AK+ IW++   + S  ++++P K + +L    ++LDA+  
Sbjct: 316 SLFLLSSDGQNVVGIQVTETAKVNIWEEKENVGSFTNRMTPEKHLNSLRNLAKSLDAEQD 375

Query: 188 FVRDH*QDERESFNIHINKMQELQQEILHMGSLSIQRTWPSSFWPNY 48
                  + +  +N     M E  +++     LS  R W  SFW NY
Sbjct: 376 TT-----NPKPFWN-----MGENSKQLPGPQKLSDPRLWQESFWKNY 412
tr_hit_id A5AP42
Definition tr|A5AP42|A5AP42_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 81
Score (bit) 44.3
E-value 0.004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912353|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B03.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5AP42|A5AP42_VITVI Putative uncharacterized protein OS=Vitis...    44   0.004
tr|A5B7U3|A5B7U3_VITVI Putative uncharacterized protein OS=Vitis...    43   0.008
tr|Q710T7|Q710T7_POPDE Gag-pol polyprotein OS=Populus deltoides ...    42   0.013
tr|A5BNN7|A5BNN7_VITVI Putative uncharacterized protein OS=Vitis...    42   0.018
tr|A5AMK2|A5AMK2_VITVI Putative uncharacterized protein OS=Vitis...    42   0.018
tr|A5BLS4|A5BLS4_VITVI Putative uncharacterized protein OS=Vitis...    42   0.023
tr|A5C9T7|A5C9T7_VITVI Putative uncharacterized protein OS=Vitis...    41   0.030
tr|Q2QP15|Q2QP15_ORYSJ Retrotransposon protein, putative, Ty1-co...    35   0.10 
tr|Q9AU17|Q9AU17_SOLCI Polyprotein-like OS=Solanum chilense PE=4...    39   0.11 
tr|Q6BCY1|Q6BCY1_IPOBA Gag-Pol OS=Ipomoea batatas GN=Rtsp-1AA PE...    39   0.11 
tr|A5C0Q9|A5C0Q9_VITVI Putative uncharacterized protein OS=Vitis...    39   0.15 
tr|A5AHH9|A5AHH9_VITVI Putative uncharacterized protein OS=Vitis...    39   0.15 
tr|Q0JG27|Q0JG27_ORYSJ Os01g0946800 protein OS=Oryza sativa subs...    39   0.19 
tr|A5BQV9|A5BQV9_VITVI Putative uncharacterized protein OS=Vitis...    39   0.19 
tr|Q2QXP9|Q2QXP9_ORYSJ Retrotransposon protein, putative, unclas...    38   0.25 
tr|A5AIJ2|A5AIJ2_VITVI Putative uncharacterized protein OS=Vitis...    38   0.25 
tr|A5C6R1|A5C6R1_VITVI Putative uncharacterized protein OS=Vitis...    37   0.56 
tr|A5AGK3|A5AGK3_VITVI Putative uncharacterized protein OS=Vitis...    37   0.56 
tr|B4LAF9|B4LAF9_DROMO GI16505 OS=Drosophila mojavensis GN=GI165...    37   0.56 
tr|B8YLY6|B8YLY6_MEDTR Gag-Pol polyprotein OS=Medicago truncatul...    37   0.74 
tr|B8YLY5|B8YLY5_MEDTR Gag-Pol polyprotein OS=Medicago truncatul...    37   0.74 
tr|B8YLY4|B8YLY4_MEDTR Gag-Pol polyprotein OS=Medicago truncatul...    37   0.74 
tr|B8YLY3|B8YLY3_MEDTR Gag-Pol polyprotein OS=Medicago truncatul...    37   0.74 
tr|Q9CY15|Q9CY15_MOUSE Putative uncharacterized protein OS=Mus m...    35   1.6  
tr|Q9FKA8|Q9FKA8_ARATH Retroelement pol polyprotein-like OS=Arab...    35   2.1  
tr|Q4RZH4|Q4RZH4_TETNG Chromosome undetermined SCAF14924, whole ...    35   2.8  
tr|Q6FFA7|Q6FFA7_ACIAD Putative uncharacterized protein OS=Acine...    35   2.8  
tr|A6X128|A6X128_OCHA4 Glycosyl transferase family 2 OS=Ochrobac...    35   2.8  
tr|Q6L3I7|Q6L3I7_SOLDE Putative uncharacterized protein OS=Solan...    35   2.8  
tr|B0B0G3|B0B0G3_CUCME Gag protein (Fragment) OS=Cucumis melo PE...    35   2.8  

>tr|A5AP42|A5AP42_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_011348 PE=4 SV=1
          Length = 1074

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 20/81 (24%), Positives = 44/81 (54%)
 Frame = -2

Query: 416 FQKPKDPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYDQLSPMK 237
           F+K +D      W  ++AR +S+++ +  P I++H+R  ++A+ +W  L  +Y Q +  +
Sbjct: 71  FEKSQDVGSFPSWAVIDARIMSWLLSSVEPHIVTHLRPHRSAQFMWAYLKKVYHQDNDAR 130

Query: 236 RIALEVQLRTLDAKNSFVRDH 174
           R  LE  +      +  ++D+
Sbjct: 131 RFQLEHTIAMFQHGSLSIQDY 151


>tr|A5B7U3|A5B7U3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031906 PE=4 SV=1
          Length = 1162

 Score = 43.1 bits (100), Expect = 0.008
 Identities = 21/74 (28%), Positives = 40/74 (54%)
 Frame = -2

Query: 434 GHFSRNFQKPKDPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYD 255
           GH        KD  G  LWE  +AR +S+++ +  P +++++R    AK +W+ L  +Y+
Sbjct: 10  GHIDGTSSTLKDTKGLGLWEAKDARIVSWLLGSIKPHMVNNLRSFSTAKEMWEYLRRIYN 69

Query: 254 QLSPMKRIALEVQL 213
           Q +      LE+++
Sbjct: 70  QDNNACCFQLELEI 83


>tr|Q710T7|Q710T7_POPDE Gag-pol polyprotein OS=Populus deltoides
           GN=60I2G14 PE=4 SV=1
          Length = 1382

 Score = 42.4 bits (98), Expect = 0.013
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
 Frame = -2

Query: 434 GHFSRNFQKPK-----DPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQL 270
           G+ S  +  PK     D V    WE  NA+ +++I      SI + +   + AK +WD L
Sbjct: 39  GYVSGTYVVPKNTEEGDTVSIDTWEANNAKIITWINNYVEHSIGTQLAKYETAKEVWDHL 98

Query: 269 SSLYDQLSPMKRIALEVQLRTLDAKNSFVRD 177
             L+ Q +  K+  LE  +R L  KN  +++
Sbjct: 99  QRLFTQSNFAKQYQLENDIRALHQKNMSIQE 129


>tr|A5BNN7|A5BNN7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_041689 PE=4 SV=1
          Length = 845

 Score = 42.0 bits (97), Expect = 0.018
 Identities = 20/81 (24%), Positives = 45/81 (55%)
 Frame = -2

Query: 416 FQKPKDPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYDQLSPMK 237
           F+K +D   +  W  ++AR +S+++ +  P I++H+R  ++A+ +W  L  +Y Q +  +
Sbjct: 46  FEKSQDVGFSPSWAVLDARIMSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDAR 105

Query: 236 RIALEVQLRTLDAKNSFVRDH 174
           R  LE  +      +  ++D+
Sbjct: 106 RFQLEHAIAMFQHGSLSIQDY 126


>tr|A5AMK2|A5AMK2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_016481 PE=4 SV=1
          Length = 776

 Score = 42.0 bits (97), Expect = 0.018
 Identities = 20/81 (24%), Positives = 45/81 (55%)
 Frame = -2

Query: 416 FQKPKDPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYDQLSPMK 237
           F+K +D   +  W  ++AR +S+++ +  P I++H+R  ++A+ +W  L  +Y Q +  +
Sbjct: 687 FEKSQDVGFSPSWAVLDARIMSWLLGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDAR 746

Query: 236 RIALEVQLRTLDAKNSFVRDH 174
           R  LE  +      +  ++D+
Sbjct: 747 RFQLEHAIAMFQHGSLSIQDY 767


>tr|A5BLS4|A5BLS4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_032683 PE=4 SV=1
          Length = 1159

 Score = 41.6 bits (96), Expect = 0.023
 Identities = 19/71 (26%), Positives = 37/71 (52%)
 Frame = -2

Query: 434 GHFSRNFQKPKDPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYD 255
           GH       P+D      WE  +AR +++I+ +  P ++ ++R  K    +W+ L ++Y+
Sbjct: 315 GHIDGXNPAPRDAEALSKWEIKDARVMTWILSSVEPHLVLNLRPYKTVVAMWNYLHTVYN 374

Query: 254 QLSPMKRIALE 222
           Q +  +R  LE
Sbjct: 375 QDNSARRFQLE 385


>tr|A5C9T7|A5C9T7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_037079 PE=4 SV=1
          Length = 1157

 Score = 41.2 bits (95), Expect = 0.030
 Identities = 18/74 (24%), Positives = 38/74 (51%)
 Frame = -2

Query: 434 GHFSRNFQKPKDPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYD 255
           GH       P+D      WE  +A+ +++I+ +  P  + ++R  K    +W+ L ++Y+
Sbjct: 47  GHIDGRNPAPRDAEALSKWEIKDAQVMTWILSSVEPHFVLNLRPYKTVATMWNYLHTVYN 106

Query: 254 QLSPMKRIALEVQL 213
           Q +  +R  LE ++
Sbjct: 107 QDNSARRFQLEYEM 120


>tr|Q2QP15|Q2QP15_ORYSJ Retrotransposon protein, putative, Ty1-copia
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g36020 PE=4 SV=1
          Length = 425

 Score = 34.7 bits (78), Expect(2) = 0.10
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = -2

Query: 401 DPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYDQLSPMKRIALE 222
           + + A  WE + A+  + I L+ + S++  +   K  K IWD+L+SLY   S   ++ L+
Sbjct: 46  EKMDAGKWEEMKAQAAATIRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLK 105

Query: 221 VQLRTLD-AKNSFVRDH 174
            QL  L   + S +R H
Sbjct: 106 QQLYGLQMQEESDLRKH 122



 Score = 24.3 bits (51), Expect(2) = 0.10
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 90  INSKNMAIQLLAQLPPQYTNFSST 19
           ++ ++MAI LL  LPP Y +  +T
Sbjct: 140 LDDEDMAIILLCSLPPSYEHVVTT 163


>tr|Q9AU17|Q9AU17_SOLCI Polyprotein-like OS=Solanum chilense PE=4
           SV=1
          Length = 1328

 Score = 39.3 bits (90), Expect = 0.11
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
 Frame = -2

Query: 410 KPKDPVGAKL--WECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYDQLSPMK 237
           K K P   KL  WE ++ +  S I L+ T  ++++I   ++A  IW +L +LY   +   
Sbjct: 41  KSKKPESMKLEDWEELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTN 100

Query: 236 RIALEVQLRTLDAKNSFVRDH*QDERESFNIHINKMQELQQEILHMG 96
           ++ L+ QL TL            DE  +F  H+N +  L  ++ ++G
Sbjct: 101 KLYLKKQLYTLH----------MDEGTNFLSHLNVLNGLITQLANLG 137


>tr|Q6BCY1|Q6BCY1_IPOBA Gag-Pol OS=Ipomoea batatas GN=Rtsp-1AA PE=4
           SV=1
          Length = 1298

 Score = 39.3 bits (90), Expect = 0.11
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -2

Query: 413 QKPKDPVGAKLWECVNARNLSFIILNSTPSIISHIRLMKNAKLIWDQLSSLYDQLSPMKR 234
           ++P D    K W  +N   ++ + L+    ++S I   K A  IWD L+ LY+  S   +
Sbjct: 37  ERPVDFTDDKKWSEMNEDAMADLYLSIADGVLSSIEEKKTANEIWDHLNRLYEAKSLHNK 96

Query: 233 IALEVQLRTLDAKNS 189
           I L+ +L TL    S
Sbjct: 97  IFLKRKLYTLRMSES 111