BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912355|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B05.
         (563 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q63850|NUP62_MOUSE Nuclear pore glycoprotein p62 OS=Mus muscu...    32   2.2  
sp|Q88NC4|ALGD_PSEPK GDP-mannose 6-dehydrogenase OS=Pseudomonas ...    32   2.8  
sp|Q4FU93|Y554_PSYA2 UPF0246 protein Psyc_0554 OS=Psychrobacter ...    30   6.3  
sp|Q8Q0L8|PYRG_METMA CTP synthase OS=Methanosarcina mazei GN=pyr...    30   8.2  

>sp|Q63850|NUP62_MOUSE Nuclear pore glycoprotein p62 OS=Mus musculus
           GN=Nup62 PE=2 SV=2
          Length = 526

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = +1

Query: 64  PCSPSACVFSGVGDLSAAMAQPLVSKVA----LFAEWVALPATILAAYFATPEPLTNEAK 231
           P +P+  V +  G    A A P  +  +    LFA   A PA+  A   + P P+T  A 
Sbjct: 191 PFTPATLVTTTAGATQPAAAAPTAATTSAGSTLFASIAAAPASSSATGLSLPAPVTTAAT 250

Query: 232 PSS-K*GFSI 258
           PS+   GFS+
Sbjct: 251 PSAGTLGFSL 260


>sp|Q88NC4|ALGD_PSEPK GDP-mannose 6-dehydrogenase OS=Pseudomonas
           putida (strain KT2440) GN=algD PE=3 SV=1
          Length = 438

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 162 PLRK*GNFGHQRLRHCCREIPNARKDTGRRRT--RSSTVEEGTVLGV 28
           P +K G+ G + +   CREI    +DT RR T    STV  GTV  V
Sbjct: 87  PSKKNGDLGLEYIESVCREIGYVLRDTTRRHTIVVRSTVLPGTVKNV 133


>sp|Q4FU93|Y554_PSYA2 UPF0246 protein Psyc_0554 OS=Psychrobacter
           arcticus (strain DSM 17307 / 273-4) GN=Psyc_0554 PE=3
           SV=1
          Length = 270

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 505 HRENYYNTPEICENSQKHPTIFKEKSP 425
           H  NYY+ PE+ E+SQ    I K K P
Sbjct: 20  HISNYYSQPELIEHSQALMKILKSKEP 46


>sp|Q8Q0L8|PYRG_METMA CTP synthase OS=Methanosarcina mazei GN=pyrG
           PE=3 SV=1
          Length = 534

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -2

Query: 550 TYTTLFQNARYILKPHRENYYNTPEICENSQKHPTIFKEKSPNASKLSE 404
           ++ T      YI++ HR  Y   PE  +  +    +F  K+ N  +++E
Sbjct: 442 SFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSGKNKNRMEIAE 490

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912355|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B05.
         (563 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PGN6|A7PGN6_VITVI Chromosome chr17 scaffold_16, whole genom...    36   1.7  
tr|Q6D904|Q6D904_ERWCT Oligogalacturonide transporter OS=Erwinia...    35   3.7  
tr|B6G8D3|B6G8D3_9ACTN Putative uncharacterized protein OS=Colli...    34   6.3  
tr|B3M0R7|B3M0R7_DROAN GF17185 OS=Drosophila ananassae GN=GF1718...    33   8.2  

>tr|A7PGN6|A7PGN6_VITVI Chromosome chr17 scaffold_16, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00017623001
            PE=4 SV=1
          Length = 1256

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +2

Query: 389  EYLKVFRKFRGIWGLFFENCWVFLGVFTNFRGIVVIFSMWLKYV 520
            E +K FR F+ IW +  E     LG+  +F+GI    S+++KYV
Sbjct: 877  ELVKPFRDFQAIWQVRIEASRALLGLEFHFKGIDAALSLFIKYV 920


>tr|Q6D904|Q6D904_ERWCT Oligogalacturonide transporter OS=Erwinia
           carotovora subsp. atroseptica GN=togT PE=4 SV=1
          Length = 508

 Score = 34.7 bits (78), Expect = 3.7
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +2

Query: 272 ISSWKPTMPSDTPIRSSTIGGESIFLWRVAKDLSV-MCNEEYLKVFRKFRGIWGLFFENC 448
           ++SW+   P +  +R ST       LW+  K LSV M +   L++FRK  G++   F   
Sbjct: 199 MTSWE--RPVNEIVRESTSS-----LWQAMKKLSVDMASTFRLRIFRKHLGMYLFGFGAE 251

Query: 449 WVFLGVFTNF 478
           W+F   FT F
Sbjct: 252 WLFASAFTYF 261


>tr|B6G8D3|B6G8D3_9ACTN Putative uncharacterized protein
           OS=Collinsella stercoris DSM 13279 GN=COLSTE_00323 PE=4
           SV=1
          Length = 863

 Score = 33.9 bits (76), Expect = 6.3
 Identities = 24/67 (35%), Positives = 34/67 (50%)
 Frame = +2

Query: 11  EILPAGTPKTVPSSTVDDLVLRRPVSFLALGISLQQWRSLWCPKLPYLRSG*RCLRLSWQ 190
           E+LPA  P  +     D    R+P  FLA GIS++ W+      LPYL         +W 
Sbjct: 92  EVLPADVPDGLARPPYD--TKRKP--FLANGISIKGWK---VESLPYL---------TWA 135

Query: 191 PILRLPS 211
           PI++LP+
Sbjct: 136 PIVKLPA 142


>tr|B3M0R7|B3M0R7_DROAN GF17185 OS=Drosophila ananassae GN=GF17185
           PE=4 SV=1
          Length = 207

 Score = 33.5 bits (75), Expect = 8.2
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 106 LSAAMAQPLVSKVALFAEWVALPATILAAYFATPEPLTNEA 228
           ++A +A P+V    L A + A PA + AAY A P PL   A
Sbjct: 133 VAAPVAAPIVRAAPLAAAYAAAPAPLAAAYAAAPAPLAYAA 173