BP912358
Clone id YMU001_000018_B08
Library
Length 569
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000018_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGAGATATTACCTGCAGGTACTCGTTATCTCCCAAGTTACAGCATGCTCTCTAGCCGAGC
TACCAATGCTGGGATTGAAAAGAGATTGGGACAAAGCACAAGGTGTGATTTAGCTCAAGC
GGATGCCTCAACCATCTCCTTAGATGTTTGGTCAGGTGAGAGGACAATAGACATGATTTT
ACCAGAGGAGAGAAACGAAACTGTCAATGTTCTAGAGAATGAGGTAACACAAAAGTGCAA
TAATGCACTTGAAGCTTCCTCATTGCTTGCAACTGTTGATGAAACAAAGGTTTCAGGTAC
AGTTAAATCTAGCAGTGGAAAAGTGAATGGTCAGAACCGTGCGCAAGATTCTATGGAGAT
TGCTGGCATGGCACCATCAAAATCTAGAAATGTTTCAGAAGTACAAAAAAGAAGTAAATT
CTAGCAGATTTTAGAAAATGATAAAACTCTTATGAAGAATGCATTTGAAGGTTTTAAGGA
AGGCTTACCTTCCGTAAACAAGACAATGCAGAAAGCTGTGACGTTAAGTTTGTGGGGAAG
ATGCTTCTGCAATCCAATCAATTAACATT
■■Homology search results ■■ -
sp_hit_id O15031
Definition sp|O15031|PLXB2_HUMAN Plexin-B2 OS=Homo sapiens
Align length 53
Score (bit) 32.0
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912358|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B08.
(569 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O15031|PLXB2_HUMAN Plexin-B2 OS=Homo sapiens GN=PLXNB2 PE=1 SV=3 32 2.2
sp|Q83MT2|TILS_TROWT tRNA(Ile)-lysidine synthase OS=Tropheryma w... 31 4.9
sp|Q83I94|TILS_TROW8 tRNA(Ile)-lysidine synthase OS=Tropheryma w... 31 4.9

>sp|O15031|PLXB2_HUMAN Plexin-B2 OS=Homo sapiens GN=PLXNB2 PE=1 SV=3
Length = 1838

Score = 32.0 bits (71), Expect = 2.2
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = -3

Query: 204 TVSFL--SSGKIMSIVLSPDQTSKE----MVEASA*AKSHLVLCPNLFSIPAL 64
TV+FL S G+I+ + L+PD TS E +VE + K LVL +L S+ A+
Sbjct: 404 TVAFLGTSDGRILKVYLTPDGTSSEYDSILVEINKRVKRDLVLSGDLGSLYAM 456


>sp|Q83MT2|TILS_TROWT tRNA(Ile)-lysidine synthase OS=Tropheryma
whipplei (strain Twist) GN=tilS PE=3 SV=1
Length = 415

Score = 30.8 bits (68), Expect = 4.9
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +2

Query: 50 SSRATNAGIEKRLGQSTR--CDLAQADASTI----SLDVWSGERTIDMILPEER--NETV 205
++R TNA I+ R G R D+ + + I LD W+ D+ R + +
Sbjct: 231 ATRFTNADIDSRFGVFIRPFLDITRHETGKICEFYGLDYWNDPHNEDVRFSRVRIRHNVM 290

Query: 206 NVLENEVTQKCNNALEASSLLATVD 280
VLENE+ AL ++ LA +D
Sbjct: 291 PVLENEIGPGVKYALSRTAKLAQLD 315


>sp|Q83I94|TILS_TROW8 tRNA(Ile)-lysidine synthase OS=Tropheryma
whipplei (strain TW08/27) GN=tilS PE=3 SV=1
Length = 407

Score = 30.8 bits (68), Expect = 4.9
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +2

Query: 50 SSRATNAGIEKRLGQSTR--CDLAQADASTI----SLDVWSGERTIDMILPEER--NETV 205
++R TNA I+ R G R D+ + + I LD W+ D+ R + +
Sbjct: 223 ATRFTNADIDSRFGVFIRPFLDITRHETGKICEFYGLDYWNDPHNEDVRFSRVRIRHNVM 282

Query: 206 NVLENEVTQKCNNALEASSLLATVD 280
VLENE+ AL ++ LA +D
Sbjct: 283 PVLENEIGPGVKYALSRTAKLAQLD 307


tr_hit_id Q10Y01
Definition tr|Q10Y01|Q10Y01_TRIEI Filamentous haemagglutinin family outer membrane protein OS=Trichodesmium erythraeum (strain IMS101)
Align length 124
Score (bit) 38.5
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912358|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B08.
(569 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q10Y01|Q10Y01_TRIEI Filamentous haemagglutinin family outer m... 39 0.26
tr|B8EIB7|B8EIB7_METSI Putative uncharacterized protein OS=Methy... 36 1.3
tr|B6K8V0|B6K8V0_TOXGO tRNA delta(2)-isopentenylpyrophosphate tr... 35 2.9
tr|A6EZU6|A6EZU6_9ALTE Guanosine polyphosphate pyrophosphohydrol... 33 8.5

>tr|Q10Y01|Q10Y01_TRIEI Filamentous haemagglutinin family outer
membrane protein OS=Trichodesmium erythraeum (strain
IMS101) GN=Tery_3830 PE=3 SV=1
Length = 3537

Score = 38.5 bits (88), Expect = 0.26
Identities = 30/124 (24%), Positives = 59/124 (47%)
Frame = +2

Query: 68 AGIEKRLGQSTRCDLAQADASTISLDVWSGERTIDMILPEERNETVNVLENEVTQKCNNA 247
AG EK +GQ T+ A+ +TI++ SGE+ I+ I NE++N+ + E+ N +
Sbjct: 2972 AGGEKNIGQVTQ----NAENNTINIQTASGEQNIEQINQTFGNESINIQDQEI----NQS 3023

Query: 248 LEASSLLATVDEXXXXXXXXXXXXXXNGQNRAQDSMEIAGMAPSKSRNVSEVQKRSKF*Q 427
L+ +S ++ + N N +D+ PS ++N+ +S+ +
Sbjct: 3024 LDTTSAISN-NNVPNNQVLNQEDFSNNNNNNIEDNFT---TNPSNNKNILSNLTQSQRSE 3079

Query: 428 ILEN 439
++ N
Sbjct: 3080 LISN 3083


>tr|B8EIB7|B8EIB7_METSI Putative uncharacterized protein
OS=Methylocella silvestris BL2 GN=Msil_2305 PE=4 SV=1
Length = 248

Score = 36.2 bits (82), Expect = 1.3
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2

Query: 17 GTRYLPSYSMLSSRATNAGIEKRLGQSTRCDLAQADASTISLDVWSGERTIDMI-LPEER 193
G L S ML R +E + G+ TR L +TISLD +GE+ + +I L E+
Sbjct: 169 GHEVLTSLEML--RDVALALEAKFGEPTRASLIWKPQNTISLDDETGEKVLRLIGLLEDN 226

Query: 194 NETVNVLEN-EVTQKCNNALEA 256
++ NV N EV++ LEA
Sbjct: 227 DDVQNVYANYEVSEAVLAKLEA 248


>tr|B6K8V0|B6K8V0_TOXGO tRNA delta(2)-isopentenylpyrophosphate
transferase, putative OS=Toxoplasma gondii ME49
GN=TGME49_112520 PE=4 SV=1
Length = 741

Score = 35.0 bits (79), Expect = 2.9
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Frame = -3

Query: 555 GLQKHLPHKLNVTAFCIVLFTEGKPSLKPSNAFFIRVLSFSKIC*NLLLFCTSETFLDFD 376
G ++ +PH +++A C +F+E P K S LS + + + F S +F
Sbjct: 23 GERRTVPHSTSMSAGCSGIFSEKLPK-KFSERLLPLRLSVTSVQEDKRHFEESASFAPAS 81

Query: 375 G-AMPAISIESCARF*PFTFPLLDLTVPETFVSSTVASNEEASSALLHFCVTSFSRTLTV 199
G A PA S + F F LL L+ + S +S+ +ASS S S TL+
Sbjct: 82 GFASPASPSTSLSTFPSF---LLSLSACASLPPSISSSSTQASST-----SPSSSSTLSS 133

Query: 198 SFLSSGKIMSIVLSPDQTSKEMVEASA 118
SF SS S SP ++S +S+
Sbjct: 134 SFSSSSLPASSPASPSRSSASASPSSS 160


>tr|A6EZU6|A6EZU6_9ALTE Guanosine polyphosphate
pyrophosphohydrolase/synthetase OS=Marinobacter algicola
DG893 GN=MDG893_14433 PE=3 SV=1
Length = 732

Score = 33.5 bits (75), Expect = 8.5
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2

Query: 335 NRAQDSMEIAGMAPSKSRNVSEVQKRSKF*QILENDKTLMKNAFEGFKEGLPSVNKTMQK 514
N A S + G A S R+V + QKR+ + L+ KTL+K + +GF L +N+ +
Sbjct: 474 NPAWLSFVVTGKARSSIRHVLKNQKRA---ESLDLGKTLLKKSLKGFGTSLSEINEHQIQ 530

Query: 515 AV 520
AV
Sbjct: 531 AV 532