BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912358|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B08.
         (569 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O15031|PLXB2_HUMAN Plexin-B2 OS=Homo sapiens GN=PLXNB2 PE=1 SV=3    32   2.2  
sp|Q83MT2|TILS_TROWT tRNA(Ile)-lysidine synthase OS=Tropheryma w...    31   4.9  
sp|Q83I94|TILS_TROW8 tRNA(Ile)-lysidine synthase OS=Tropheryma w...    31   4.9  

>sp|O15031|PLXB2_HUMAN Plexin-B2 OS=Homo sapiens GN=PLXNB2 PE=1 SV=3
          Length = 1838

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
 Frame = -3

Query: 204 TVSFL--SSGKIMSIVLSPDQTSKE----MVEASA*AKSHLVLCPNLFSIPAL 64
           TV+FL  S G+I+ + L+PD TS E    +VE +   K  LVL  +L S+ A+
Sbjct: 404 TVAFLGTSDGRILKVYLTPDGTSSEYDSILVEINKRVKRDLVLSGDLGSLYAM 456


>sp|Q83MT2|TILS_TROWT tRNA(Ile)-lysidine synthase OS=Tropheryma
           whipplei (strain Twist) GN=tilS PE=3 SV=1
          Length = 415

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
 Frame = +2

Query: 50  SSRATNAGIEKRLGQSTR--CDLAQADASTI----SLDVWSGERTIDMILPEER--NETV 205
           ++R TNA I+ R G   R   D+ + +   I     LD W+     D+     R  +  +
Sbjct: 231 ATRFTNADIDSRFGVFIRPFLDITRHETGKICEFYGLDYWNDPHNEDVRFSRVRIRHNVM 290

Query: 206 NVLENEVTQKCNNALEASSLLATVD 280
            VLENE+      AL  ++ LA +D
Sbjct: 291 PVLENEIGPGVKYALSRTAKLAQLD 315


>sp|Q83I94|TILS_TROW8 tRNA(Ile)-lysidine synthase OS=Tropheryma
           whipplei (strain TW08/27) GN=tilS PE=3 SV=1
          Length = 407

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
 Frame = +2

Query: 50  SSRATNAGIEKRLGQSTR--CDLAQADASTI----SLDVWSGERTIDMILPEER--NETV 205
           ++R TNA I+ R G   R   D+ + +   I     LD W+     D+     R  +  +
Sbjct: 223 ATRFTNADIDSRFGVFIRPFLDITRHETGKICEFYGLDYWNDPHNEDVRFSRVRIRHNVM 282

Query: 206 NVLENEVTQKCNNALEASSLLATVD 280
            VLENE+      AL  ++ LA +D
Sbjct: 283 PVLENEIGPGVKYALSRTAKLAQLD 307

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912358|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B08.
         (569 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q10Y01|Q10Y01_TRIEI Filamentous haemagglutinin family outer m...    39   0.26 
tr|B8EIB7|B8EIB7_METSI Putative uncharacterized protein OS=Methy...    36   1.3  
tr|B6K8V0|B6K8V0_TOXGO tRNA delta(2)-isopentenylpyrophosphate tr...    35   2.9  
tr|A6EZU6|A6EZU6_9ALTE Guanosine polyphosphate pyrophosphohydrol...    33   8.5  

>tr|Q10Y01|Q10Y01_TRIEI Filamentous haemagglutinin family outer
            membrane protein OS=Trichodesmium erythraeum (strain
            IMS101) GN=Tery_3830 PE=3 SV=1
          Length = 3537

 Score = 38.5 bits (88), Expect = 0.26
 Identities = 30/124 (24%), Positives = 59/124 (47%)
 Frame = +2

Query: 68   AGIEKRLGQSTRCDLAQADASTISLDVWSGERTIDMILPEERNETVNVLENEVTQKCNNA 247
            AG EK +GQ T+     A+ +TI++   SGE+ I+ I     NE++N+ + E+    N +
Sbjct: 2972 AGGEKNIGQVTQ----NAENNTINIQTASGEQNIEQINQTFGNESINIQDQEI----NQS 3023

Query: 248  LEASSLLATVDEXXXXXXXXXXXXXXNGQNRAQDSMEIAGMAPSKSRNVSEVQKRSKF*Q 427
            L+ +S ++  +               N  N  +D+       PS ++N+     +S+  +
Sbjct: 3024 LDTTSAISN-NNVPNNQVLNQEDFSNNNNNNIEDNFT---TNPSNNKNILSNLTQSQRSE 3079

Query: 428  ILEN 439
            ++ N
Sbjct: 3080 LISN 3083


>tr|B8EIB7|B8EIB7_METSI Putative uncharacterized protein
           OS=Methylocella silvestris BL2 GN=Msil_2305 PE=4 SV=1
          Length = 248

 Score = 36.2 bits (82), Expect = 1.3
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = +2

Query: 17  GTRYLPSYSMLSSRATNAGIEKRLGQSTRCDLAQADASTISLDVWSGERTIDMI-LPEER 193
           G   L S  ML  R     +E + G+ TR  L     +TISLD  +GE+ + +I L E+ 
Sbjct: 169 GHEVLTSLEML--RDVALALEAKFGEPTRASLIWKPQNTISLDDETGEKVLRLIGLLEDN 226

Query: 194 NETVNVLEN-EVTQKCNNALEA 256
           ++  NV  N EV++     LEA
Sbjct: 227 DDVQNVYANYEVSEAVLAKLEA 248


>tr|B6K8V0|B6K8V0_TOXGO tRNA delta(2)-isopentenylpyrophosphate
           transferase, putative OS=Toxoplasma gondii ME49
           GN=TGME49_112520 PE=4 SV=1
          Length = 741

 Score = 35.0 bits (79), Expect = 2.9
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
 Frame = -3

Query: 555 GLQKHLPHKLNVTAFCIVLFTEGKPSLKPSNAFFIRVLSFSKIC*NLLLFCTSETFLDFD 376
           G ++ +PH  +++A C  +F+E  P  K S       LS + +  +   F  S +F    
Sbjct: 23  GERRTVPHSTSMSAGCSGIFSEKLPK-KFSERLLPLRLSVTSVQEDKRHFEESASFAPAS 81

Query: 375 G-AMPAISIESCARF*PFTFPLLDLTVPETFVSSTVASNEEASSALLHFCVTSFSRTLTV 199
           G A PA    S + F  F   LL L+   +   S  +S+ +ASS        S S TL+ 
Sbjct: 82  GFASPASPSTSLSTFPSF---LLSLSACASLPPSISSSSTQASST-----SPSSSSTLSS 133

Query: 198 SFLSSGKIMSIVLSPDQTSKEMVEASA 118
           SF SS    S   SP ++S     +S+
Sbjct: 134 SFSSSSLPASSPASPSRSSASASPSSS 160


>tr|A6EZU6|A6EZU6_9ALTE Guanosine polyphosphate
           pyrophosphohydrolase/synthetase OS=Marinobacter algicola
           DG893 GN=MDG893_14433 PE=3 SV=1
          Length = 732

 Score = 33.5 bits (75), Expect = 8.5
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = +2

Query: 335 NRAQDSMEIAGMAPSKSRNVSEVQKRSKF*QILENDKTLMKNAFEGFKEGLPSVNKTMQK 514
           N A  S  + G A S  R+V + QKR+   + L+  KTL+K + +GF   L  +N+   +
Sbjct: 474 NPAWLSFVVTGKARSSIRHVLKNQKRA---ESLDLGKTLLKKSLKGFGTSLSEINEHQIQ 530

Query: 515 AV 520
           AV
Sbjct: 531 AV 532