BP912361
Clone id YMU001_000018_B11
Library
Length 463
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000018_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAAACGTACCCTATCCGATTGTCCAATTTCTGCTTTTTTTATGGGTCTGCCTACTTACTT
TTTCTGTTGTACGTTATTTGGGCCTGCCCTCTCATCTGTGTTATTCTCAATAGTTGATAC
TCCTTTCTCAGAGCTTCCCCAGCATGATTGAGCTTCGGGCGTACTACGCCCCAAACTCCT
GTTGAGTGATAGAGTTTGTCAACTCTCGCTAAGTCCATGACTATGCCAGCACCAAACACA
CAAATAACAACACATTCCTAAAAATGCACAACTATAGACAAACACATTCACCTGCTCGTT
CATATTCATACGAAATGATCGTGTACAAGATATTTAAACCAGACCACATTTACAAACCAG
TCTGATATGGGTAGTTCACTGAAATTTGCCCAACTCTCAAAAGTCTGAATGTGTACCTGT
GGGTCTCTTCCTTTCTTTCCTTTGAATTCAGACACTTTCACCT
■■Homology search results ■■ -
sp_hit_id Q5A6S9
Definition sp|Q5A6S9|IPI12_CANAL Pre-rRNA-processing protein IPI1-2 OS=Candida albicans
Align length 39
Score (bit) 31.6
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912361|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B11.
(463 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5A6S9|IPI12_CANAL Pre-rRNA-processing protein IPI1-2 OS=Cand... 32 1.7
sp|P51931|NU1M_DROGU NADH-ubiquinone oxidoreductase chain 1 (Fra... 30 5.1
sp|P33502|NU1M_ANOQU NADH-ubiquinone oxidoreductase chain 1 OS=A... 30 5.1
sp|Q54D93|PITP4_DICDI Phosphatidylinositol transfer protein 4 OS... 29 8.7
sp|P34846|NU1M_ANOGA NADH-ubiquinone oxidoreductase chain 1 OS=A... 29 8.7

>sp|Q5A6S9|IPI12_CANAL Pre-rRNA-processing protein IPI1-2 OS=Candida
albicans GN=IPI1-2 PE=3 SV=1
Length = 241

Score = 31.6 bits (70), Expect = 1.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3

Query: 216 HDYASTKHTNNNTFLKMHNYRQTHSPARSYSYEMIVYKI 332
H + TKH ++NT ++ NY QTH P Y+ I+ I
Sbjct: 76 HQLSLTKHHSSNTRKEVLNYLQTHLPENPSYYKNIMTSI 114


>sp|P51931|NU1M_DROGU NADH-ubiquinone oxidoreductase chain 1
(Fragments) OS=Drosophila guanche GN=mt:ND1 PE=3 SV=2
Length = 163

Score = 30.0 bits (66), Expect = 5.1
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1

Query: 1 QTYPIRLSNFCFFYGSA-YLLFLLYVIWACPLICVILNS 114
QTYP+ LSN+ +Y S + LFL +W C V LNS
Sbjct: 64 QTYPL-LSNYLSYYISPIFSLFLSLFVWMCMPFFVKLNS 101


>sp|P33502|NU1M_ANOQU NADH-ubiquinone oxidoreductase chain 1
OS=Anopheles quadrimaculatus GN=ND1 PE=3 SV=1
Length = 314

Score = 30.0 bits (66), Expect = 5.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1

Query: 1 QTYPIRLSNFCFFYGSAYLLFLLYVIWAC 87
QTYP+ + +++ + LFL VIW C
Sbjct: 65 QTYPLLSNYISYYFSPIFSLFLSLVIWMC 93


>sp|Q54D93|PITP4_DICDI Phosphatidylinositol transfer protein 4
OS=Dictyostelium discoideum GN=pitD PE=3 SV=2
Length = 331

Score = 29.3 bits (64), Expect = 8.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2

Query: 279 VYSCAFLGMCCYLCVWCWHSHGLSES*QTLSLNRSL 172
+YSC F G YLC+ H G E L++ +
Sbjct: 97 IYSCPFFGEKFYLCIESIHKDGRDEEENVFGLSKDI 132


>sp|P34846|NU1M_ANOGA NADH-ubiquinone oxidoreductase chain 1
OS=Anopheles gambiae GN=mt:ND1 PE=3 SV=1
Length = 314

Score = 29.3 bits (64), Expect = 8.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1

Query: 1 QTYPIRLSNFCFFYGSAYLLFLLYVIWAC 87
QTYP+ + +++ + LFL +IW C
Sbjct: 65 QTYPLLSNYISYYFSPVFSLFLSLLIWMC 93


tr_hit_id Q86L08
Definition tr|Q86L08|Q86L08_DICDI Similar to Dictyostelium discoideum (Slime mold). MkpA protein OS=Dictyostelium discoideum
Align length 39
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912361|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_B11.
(463 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q86L08|Q86L08_DICDI Similar to Dictyostelium discoideum (Slim... 33 7.0
tr|Q550H0|Q550H0_DICDI Putative uncharacterized protein OS=Dicty... 33 7.0
tr|Q9CJ79|Q9CJ79_LACLA Putative uncharacterized protein ybcH OS=... 33 7.0
tr|A9QS70|A9QS70_LACLA Alpha/beta hydrolase OS=Lactococcus lacti... 33 7.0
tr|A8PYM5|A8PYM5_BRUMA Neuralized family protein OS=Brugia malay... 33 9.1

>tr|Q86L08|Q86L08_DICDI Similar to Dictyostelium discoideum (Slime
mold). MkpA protein OS=Dictyostelium discoideum PE=4
SV=1
Length = 783

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1

Query: 334 LNQTTFTNQSDMGSSLKFAQLSKV*MCTCGSLPFFPLNS 450
LN T F+N SD+G LK LSK+ + C +L L +
Sbjct: 602 LNLTDFSNHSDLGGELKLPSLSKLQLIDCKNLKTISLTA 640


>tr|Q550H0|Q550H0_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0217911 PE=4 SV=1
Length = 864

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1

Query: 334 LNQTTFTNQSDMGSSLKFAQLSKV*MCTCGSLPFFPLNS 450
LN T F+N SD+G LK LSK+ + C +L L +
Sbjct: 683 LNLTDFSNHSDLGGELKLPSLSKLQLIDCKNLKTISLTA 721


>tr|Q9CJ79|Q9CJ79_LACLA Putative uncharacterized protein ybcH
OS=Lactococcus lactis subsp. lactis GN=ybcH PE=4 SV=1
Length = 311

Score = 33.1 bits (74), Expect = 7.0
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3

Query: 222 YASTKHTNNNTFLKMHNYRQTHSPARSYS--YEMIVYKIFKPDH 347
Y +H NNT + +H +RQ S R Y + + Y + PD+
Sbjct: 80 YVPAEHKTNNTVIVVHGFRQDKSAMRQYGQLFHELGYNVLMPDN 123


>tr|A9QS70|A9QS70_LACLA Alpha/beta hydrolase OS=Lactococcus lactis
subsp. lactis GN=ybcH PE=4 SV=1
Length = 311

Score = 33.1 bits (74), Expect = 7.0
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3

Query: 222 YASTKHTNNNTFLKMHNYRQTHSPARSYS--YEMIVYKIFKPDH 347
Y +H NNT + +H +RQ S R Y + + Y + PD+
Sbjct: 80 YVPAEHKTNNTVIVVHGFRQDKSAMRQYGQLFHELGYNVLMPDN 123


>tr|A8PYM5|A8PYM5_BRUMA Neuralized family protein OS=Brugia malayi
GN=Bm1_38725 PE=4 SV=1
Length = 735

Score = 32.7 bits (73), Expect = 9.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2

Query: 312 RMNMNEQVNVFVYSCAFLGMCCYLCVWCWHSHG 214
R+ MN +VN +Y+C + MC WH +G
Sbjct: 685 RICMNSKVNCVIYTCGHMSMCFECATETWHLNG 717