BP912362 |
Clone id |
YMU001_000018_B12 |
Library |
YMU01 |
Length |
465 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000018_B12. |
Accession |
BP912362 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL10Contig1 |
Sequence |
AACGAAGGAAAAGGGTCAACCAGTGAGACGATGAGGGATAAGCTTCACCGTCGAGAGGGG AACAGCCCAGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGGTAAAGGAGGTAGGA GTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAG CTCACTGATCAAGCGCTCTTGCGCCGAATATGAGCGGGACTAAGCGGTCTGCCGAAGCTG TGGGATGTCAAAAAACATCGGTAGGGGAGCGTTCCGCCCCAGATGGAAGCACCAGTGCGA GCAGGTGTGGGCGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGA ATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCGCGGAGGGTGAGTCA GGTCCTAAGATCAGGCCGAGAGGCGTAGTTGATGGACAACGGGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5R5Q2 |
Definition |
sp|Q5R5Q2|SRRM1_PONAB Serine/arginine repetitive matrix protein 1 OS=Pongo abelii |
Align length |
148 |
Score (bit) |
33.1 |
E-value |
0.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9RXQ4 |
Definition |
tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans |
Align length |
132 |
Score (bit) |
110.0 |
E-value |
3.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912362|Adiantum capillus-veneris mRNA, clone: YMU001_000018_B12. (465 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deino... 110 3e-23 tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deino... 110 3e-23 tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa s... 103 4e-21 tr|A1IW39|A1IW39_9LAMI Putative uncharacterized protein ophh-69 ... 100 4e-20 tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medic... 97 3e-19 tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkh... 83 6e-15 tr|A7QYC6|A7QYC6_VITVI Chromosome undetermined scaffold_244, who... 65 1e-09 tr|Q0JIM3|Q0JIM3_ORYSJ Photosystem I P700 chlorophyll A apoprote... 55 2e-06 tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea ... 41 1e-05 tr|B1N6J8|B1N6J8_9PROT Putative uncharacterized protein OS=uncul... 52 1e-05 tr|B0MGK2|B0MGK2_9FIRM Putative uncharacterized protein OS=Anaer... 40 6e-05 tr|B0TIE5|B0TIE5_HELMI Putative uncharacterized protein OS=Helio... 48 2e-04 tr|Q6AV58|Q6AV58_ORYSJ Putative uncharacterized protein OSJNBb01... 37 3e-04 tr|A1XNB2|A1XNB2_VICSA Putative cysteine synthase Voas-tl5 OS=Vi... 48 3e-04 tr|A8R9P7|A8R9P7_9FIRM Putative uncharacterized protein OS=Eubac... 47 5e-04 tr|B0PCK9|B0PCK9_9FIRM Putative uncharacterized protein OS=Anaer... 44 0.005 tr|B0PBI2|B0PBI2_9FIRM Putative uncharacterized protein OS=Anaer... 44 0.005 tr|B0P654|B0P654_9FIRM Putative uncharacterized protein OS=Anaer... 44 0.005 tr|A8R9Q0|A8R9Q0_9FIRM Putative uncharacterized protein OS=Eubac... 43 0.009 tr|B7R8W2|B7R8W2_9THEO Putative uncharacterized protein OS=Carbo... 42 0.015 tr|A5Z498|A5Z498_9FIRM Putative uncharacterized protein OS=Eubac... 42 0.020 tr|A7QEC9|A7QEC9_VITVI Chromosome chr1 scaffold_84, whole genome... 42 0.020 tr|B0MI56|B0MI56_9FIRM Putative uncharacterized protein (Fragmen... 37 0.067 tr|A5KRD2|A5KRD2_9FIRM Putative uncharacterized protein OS=Rumin... 38 0.28 tr|A5KP23|A5KP23_9FIRM Putative uncharacterized protein OS=Rumin... 38 0.28 tr|A5KL04|A5KL04_9FIRM Putative uncharacterized protein OS=Rumin... 38 0.28 tr|A1HM07|A1HM07_9FIRM Putative uncharacterized protein OS=Therm... 37 0.37 tr|B4DYX4|B4DYX4_HUMAN cDNA FLJ60980, highly similar to Cell div... 37 0.48 tr|Q9CVL4|Q9CVL4_MOUSE Putative uncharacterized protein (Fragmen... 37 0.63 tr|Q3TNY6|Q3TNY6_MOUSE Putative uncharacterized protein (Fragmen... 37 0.63
>tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans GN=DR_0254 PE=4 SV=1 Length = 139
Score = 110 bits (276), Expect = 3e-23 Identities = 67/132 (50%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Frame = -2
Query: 464 TRCPSTTPLGLILGPDSPSADEPCGGTLRFSGHWILTNVFVTQADILASASPTPARTGAS 285 T CPS P GL LGPD P AD+P GTL + ILT+ VT A I S T AS Sbjct: 8 TCCPSAAPFGLTLGPDFPWADDPSPGTLVLTAKKILTSFIVTHAGIRTSVGSTTPSGMAS 67
Query: 284 IWGGTLPYRCFLT---SHSFGRPLSPAHIRRKSA*SVSYYALFQGWLLLGKPPGCLCTPT 114 P R + S + LSP H RR VSYYALF+GWLLL +PPGCLC T Sbjct: 68 PRTERSPTRQLASRVESIASVDHLSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDDT 127
Query: 113 SFTTERSFRGLS 78 S TTERSFR LS Sbjct: 128 SLTTERSFRDLS 139
>tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans GN=DR_2252 PE=4 SV=1 Length = 133
Score = 110 bits (276), Expect = 3e-23 Identities = 67/132 (50%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Frame = -2
Query: 464 TRCPSTTPLGLILGPDSPSADEPCGGTLRFSGHWILTNVFVTQADILASASPTPARTGAS 285 T CPS P GL LGPD P AD+P GTL + ILT+ VT A I S T AS Sbjct: 2 TCCPSAAPFGLTLGPDFPWADDPSPGTLVLTAKKILTSFIVTHAGIRTSVGSTTPSGMAS 61
Query: 284 IWGGTLPYRCFLT---SHSFGRPLSPAHIRRKSA*SVSYYALFQGWLLLGKPPGCLCTPT 114 P R + S + LSP H RR VSYYALF+GWLLL +PPGCLC T Sbjct: 62 PRTERSPTRQLASRVESIASVDHLSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDDT 121
Query: 113 SFTTERSFRGLS 78 S TTERSFR LS Sbjct: 122 SLTTERSFRDLS 133
>tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa subsp. indica PE=4 SV=1 Length = 109
Score = 103 bits (257), Expect = 4e-21 Identities = 50/56 (89%), Positives = 51/56 (91%) Frame = +1
Query: 7 GKGSTSETMRDKLHRREGNSPDHQLRPLNDRSVVKEVGVQRQPGGLPRSSHP*KSA 174 G S SETM DKLHRREGNSPDHQLRPLNDRSV+KEVGVQRQPGGLPRSSHP KSA Sbjct: 54 GVRSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA 109
>tr|A1IW39|A1IW39_9LAMI Putative uncharacterized protein ophh-69 (Fragment) OS=Phillyrea latifolia GN=ophh-69 PE=2 SV=1 Length = 166
Score = 100 bits (249), Expect = 4e-20 Identities = 50/67 (74%), Positives = 54/67 (80%) Frame = +3
Query: 213 SGTKRSAEAVGCQKTSVGERSAPDGSTSASRCGRSGSENVGLSNENIGENPMPRKPKGSS 392 +G + AVGC+ TSVGERSA +GS AS GRSGSENVGLSN NIGENPMPRKPKGSS Sbjct: 100 AGDVQGCRAVGCKNTSVGERSALEGSPRASSGGRSGSENVGLSNANIGENPMPRKPKGSS 159
Query: 393 ARFVRGG 413 ARFV GG Sbjct: 160 ARFVHGG 166
Score = 96.3 bits (238), Expect = 7e-19 Identities = 49/63 (77%), Positives = 52/63 (82%) Frame = +3
Query: 237 AVGCQKTSVGERSAPDGSTSASRCGRSGSENVGLSNENIGENPMPRKPKGSSARFVRGG* 416 AVGC+ TSVGERSA +GS S GRSGSENVGLSN NIGENPMPRKPKGSSA FV GG Sbjct: 3 AVGCKNTSVGERSALEGSPRVSSGGRSGSENVGLSNANIGENPMPRKPKGSSAWFVHGGS 62
Query: 417 VRS 425 VR+ Sbjct: 63 VRA 65
>tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 102
Score = 97.4 bits (241), Expect = 3e-19 Identities = 45/49 (91%), Positives = 46/49 (93%) Frame = +1
Query: 16 STSETMRDKLHRREGNSPDHQLRPLNDRSVVKEVGVQRQPGGLPRSSHP 162 S SE M DKLHRREGNSPDHQLRPLNDRSV+KEVGVQRQPGGLPRSSHP Sbjct: 54 SASEAMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP 102
>tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=BMULJ_05092 PE=4 SV=1 Length = 123
Score = 83.2 bits (204), Expect = 6e-15 Identities = 50/119 (42%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Frame = -2
Query: 455 PSTTPLGLILGPDSPSADEPCGGTLRFSGHWILTNVFVTQADILASASPTPARTGASIWG 276 PS T L LG DSP ADE C G L + T T I S + + S Sbjct: 5 PSATHFCLALGADSPYADERCVGNLGLTARGPFTPFIATHVSIRTSDTSSTLYKAPSQAY 64
Query: 275 GTLPYR-CFLTSHSFGRPLSPAHIRRKSA*SVSYYALFQGWLLLGKPPGCLCTPTSFTT 102 GTL Y C S + L+P H+ R++ SVSYYA F+GWLLL +PP C PTSF T Sbjct: 65 GTLSYHACKHASAASVYGLAPLHLPRRTTRSVSYYAFFKGWLLLSQPPDCFSLPTSFPT 123
>tr|A7QYC6|A7QYC6_VITVI Chromosome undetermined scaffold_244, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009678001 PE=4 SV=1 Length = 114
Score = 65.5 bits (158), Expect = 1e-09 Identities = 36/58 (62%), Positives = 39/58 (67%) Frame = +3
Query: 240 VGCQKTSVGERSAPDGSTSASRCGRSGSENVGLSNENIGENPMPRKPKGSSARFVRGG 413 V + SVGERSA +GST ASR + N NIGENPMPRKPKGSSARFV GG Sbjct: 60 VKSKNASVGERSALEGSTRASRRVDEAEARI---NANIGENPMPRKPKGSSARFVHGG 114
>tr|Q0JIM3|Q0JIM3_ORYSJ Photosystem I P700 chlorophyll A apoprotein OS=Oryza sativa subsp. japonica GN=Os01g0790900 PE=3 SV=1 Length = 1546
Score = 54.7 bits (130), Expect = 2e-06 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = -2
Query: 278 GGTLPYRCFLTSHSFGRPLSPAHIRRKSA 192 GGTLPYRC LTSHSFGR LSP H++RK A Sbjct: 603 GGTLPYRCILTSHSFGRSLSPVHLQRKGA 631
>tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea PE=2 SV=1 Length = 182
Score = 41.2 bits (95), Expect(2) = 1e-05 Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 3/51 (5%) Frame = -1
Query: 276 RNAPLPMFFDIPQLRQTA*SRS---YSAQERLISELLRTLSRVAASRQTSW 133 RNAPLP+ + P +R S SA + SELLRTLSRVAAS+ TSW Sbjct: 123 RNAPLPLQAE-PVIRSLGVLLSPVTLSAPDHSTSELLRTLSRVAASKPTSW 172
Score = 30.8 bits (68), Expect(2) = 1e-05 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -3
Query: 418 THPPRTNLAEEPLGFRGIGFSP 353 T+P R +LA+E L FR +GFSP Sbjct: 76 TNPERIDLAQETLDFRCVGFSP 97
>tr|B1N6J8|B1N6J8_9PROT Putative uncharacterized protein OS=uncultured beta proteobacterium CBNPD1 BAC clone 578 PE=4 SV=1 Length = 109
Score = 52.0 bits (123), Expect = 1e-05 Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = -2
Query: 455 PSTTPLGLILGPDSPSADEPCGGTLRFSGHWILTNVFVTQADILASASPTPARTGASIWG 276 PS T L L LG DSP ADE C G L + + T T I S + + S Sbjct: 11 PSATHLCLALGADSPYADERCVGNLALTARGLFTPFNATHVSIRTSDTSSRLHNPPSQAY 70
Query: 275 GTLPYRCF-LTSHSFGRPLSPAHIRRKSA*SVSYYALFQ 162 TL Y S + L+P H+ R++ SVSYYA F+ Sbjct: 71 RTLSYHAHCCASAASVTGLAPLHLPRRTTRSVSYYAFFK 109
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