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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912363
Clone id YMU001_000018_C01
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000018_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CATACCGTTTACCTTCTCATGAGGATTGGTGGGTGTTCTTTGCCCTAACTTAGGAGACTT
GATTGTTGCGTAGCAGGGGACTTCGGTGTTTGAGGTTGCACAAACTGGCCATCATGGCCA
TCATATCCGATTGGAGTTTTAGGGTAAAGTACCTCTTGATTAGCATGTGGATGTACATTG
GCAGCTTGTTAGAGTGGTGTGCTCTTCAAAGCGGCGCTCTTGTGTTGACCCTATCTTGAT
TGCAGTGGAGACATTACTTTGGAGATTGTGGATATGGTAGGGAAAGCCCCTAGTTAATTT
GGATTGGGATCGTGGTGAGTGGCAGTGGCCTTCTTTGAAGGCTGATGGGGTCCCTCTTTC
ATTTTTTGAGTACATTGTCTCCCTTGGGAGGAGGCTTATCTTGTAGACATGACACACACC
TCACCCGTCCATGTTAGATAGAGGTATGGCAGGATCAACGCATCTATCCCGCTTTCCAGC
GATAGTTTTGGTCATGCATCTGGACCCTCACGATCA
■■Homology search results ■■ -
sp_hit_id Q92212
Definition sp|Q92212|STE20_CANAL Serine/threonine-protein kinase CST20 OS=Candida albicans
Align length 71
Score (bit) 32.7
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912363|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_C01.
         (516 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q92212|STE20_CANAL Serine/threonine-protein kinase CST20 OS=C...    33   1.0  
sp|Q8Y5N8|SYI_LISMO Isoleucyl-tRNA synthetase OS=Listeria monocy...    30   8.7  
sp|Q71Y01|SYI_LISMF Isoleucyl-tRNA synthetase OS=Listeria monocy...    30   8.7  
sp|Q929Z6|SYI_LISIN Isoleucyl-tRNA synthetase OS=Listeria innocu...    30   8.7  

>sp|Q92212|STE20_CANAL Serine/threonine-protein kinase CST20
           OS=Candida albicans GN=CST20 PE=3 SV=2
          Length = 1228

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = -2

Query: 260 KVMSPLQSR*GQHKSAALKSTPL*QAANVHPHANQEVLY-PKTPIGYDGHDGQFVQPQ-T 87
           KV++P QS   + +S         Q+ N HPH +    Y P+TP  +   +GQF+  +  
Sbjct: 600 KVITPSQSMPTKTESK--------QSENQHPHEDNATQYTPRTPTSH-VQEGQFIPSRPA 650

Query: 86  PKSPATQQSSL 54
           PK P+T  SS+
Sbjct: 651 PKPPSTPLSSM 661


>sp|Q8Y5N8|SYI_LISMO Isoleucyl-tRNA synthetase OS=Listeria
           monocytogenes GN=ileS PE=3 SV=1
          Length = 921

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +2

Query: 227 DPILIAVETLLWRLWIW*GKPLVNLDWDRGEWQWPSLKADGVPLSFF 367
           D +L AV+ + W    W    L N+  DRG+W     +A GVPL  F
Sbjct: 419 DDLLAAVKGVNWTP-AWGETRLFNMVRDRGDWVISRQRAWGVPLPIF 464


>sp|Q71Y01|SYI_LISMF Isoleucyl-tRNA synthetase OS=Listeria
           monocytogenes serotype 4b (strain F2365) GN=ileS PE=3
           SV=1
          Length = 921

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +2

Query: 227 DPILIAVETLLWRLWIW*GKPLVNLDWDRGEWQWPSLKADGVPLSFF 367
           D +L AV+ + W    W    L N+  DRG+W     +A GVPL  F
Sbjct: 419 DDLLAAVKGVNWTP-AWGETRLFNMVRDRGDWVISRQRAWGVPLPIF 464


>sp|Q929Z6|SYI_LISIN Isoleucyl-tRNA synthetase OS=Listeria innocua
           GN=ileS PE=3 SV=1
          Length = 921

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +2

Query: 227 DPILIAVETLLWRLWIW*GKPLVNLDWDRGEWQWPSLKADGVPLSFF 367
           D +L AV+ + W    W    L N+  DRG+W     +A GVPL  F
Sbjct: 419 DDLLAAVKGVNWTP-AWGETRLFNMVRDRGDWVISRQRAWGVPLPIF 464
tr_hit_id Q5BCI8
Definition tr|Q5BCI8|Q5BCI8_EMENI Putative uncharacterized protein OS=Emericella nidulans
Align length 30
Score (bit) 36.2
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912363|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_C01.
         (516 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5BCI8|Q5BCI8_EMENI Putative uncharacterized protein OS=Emeri...    36   1.0  
tr|A9SA28|A9SA28_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.7  
tr|B6FCI6|B6FCI6_9ENTR Putative uncharacterized protein OS=Enter...    35   2.2  
tr|A9SEE5|A9SEE5_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.9  
tr|Q5N2L5|Q5N2L5_SYNP6 Permease protein of amino acid ABC transp...    34   4.9  
tr|Q31RN9|Q31RN9_SYNE7 Amino acid ABC transporter, permease prot...    34   4.9  

>tr|Q5BCI8|Q5BCI8_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN1742.2 PE=4 SV=1
          Length = 940

 Score = 36.2 bits (82), Expect = 1.0
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +1

Query: 346 WGPSFIF*VHCLPWEEAYLVDMTHTSPVHV 435
           WGP+F     C PW+ AY+V +  T+P+HV
Sbjct: 192 WGPAF---APCGPWKPAYVVQLEKTAPIHV 218


>tr|A9SA28|A9SA28_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_76531 PE=4 SV=1
          Length = 496

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 263 RLWIW*GKPLVNLDWDRGEWQWPSLKADGVPLSFFEYIVSLG 388
           RLW++   P+  L WD  +WQW  L     P +FF+Y    G
Sbjct: 302 RLWLFGTVPISQLGWDPRDWQWARLGC-LQPCNFFQYTTKRG 342


>tr|B6FCI6|B6FCI6_9ENTR Putative uncharacterized protein
           OS=Enterobacter cancerogenus ATCC 35316 GN=ENTCAN_02452
           PE=4 SV=1
          Length = 336

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 24/70 (34%), Positives = 37/70 (52%)
 Frame = +3

Query: 105 LAIMAIISDWSFRVKYLLISMWMYIGSLLEWCALQSGALVLTLS*LQWRHYFGDCGYGRE 284
           LAI+A +S W+      + + W  + +L  W  L   ALVL LS LQWR    D  + R 
Sbjct: 203 LAIIAAVSVWTPLSYPAIAARWFSLPNL--WFLLPVPALVLLLSVLQWRCLNNDDSHSR- 259

Query: 285 SP*LIWIGIV 314
            P ++ +G++
Sbjct: 260 -PFILTLGLI 268


>tr|A9SEE5|A9SEE5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_78252 PE=4 SV=1
          Length = 337

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +2

Query: 218 SCVDPILIAVE--TLLWRLWIW*GKPLVNLDWDRGEWQWPSLKADGVPLSFFEYIVSLGR 391
           S +DP  +  E  TL +R+W++   P++ L WD  +W W  +       +F+ Y   LG 
Sbjct: 42  SRLDPARLPREQNTLPYRVWLFSSAPILYLPWDPIDWHWNDIGC-VKGRNFYAYTTKLGY 100

Query: 392 RL 397
           R+
Sbjct: 101 RI 102


>tr|Q5N2L5|Q5N2L5_SYNP6 Permease protein of amino acid ABC
           transporter OS=Synechococcus sp. (strain ATCC 27144 /
           PCC 6301 / SAUG 1402/1) GN=syc1265_c PE=3 SV=1
          Length = 396

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
 Frame = +2

Query: 260 WRLWIW*G--KPLVNLDWD-----------RGEWQWPSLKA--DGVPLSFFEYIVSLGRR 394
           WRLW+W G   P + L W            R  W W  L A   G+PL +F +   LG  
Sbjct: 77  WRLWLWLGLLSPTLGLTWGCLATGSHRWQRRSLWGWAGLAAAIAGIPLPWFPH--KLGLA 134

Query: 395 LIL*T*HTPHPSMLDRGMAGSTHLSRFPAIVLVMHL 502
            I  T   P  S L +   G   L   P +  V+ L
Sbjct: 135 AIAAT--VPAASWLAQRCRGQAWLRFLPTLWGVLFL 168


>tr|Q31RN9|Q31RN9_SYNE7 Amino acid ABC transporter, permease
           protein, 3-TM region, His/Glu/Gln/Arg/opine
           OS=Synechococcus elongatus (strain PCC 7942)
           GN=Synpcc7942_0248 PE=3 SV=1
          Length = 396

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
 Frame = +2

Query: 260 WRLWIW*G--KPLVNLDWD-----------RGEWQWPSLKA--DGVPLSFFEYIVSLGRR 394
           WRLW+W G   P + L W            R  W W  L A   G+PL +F +   LG  
Sbjct: 77  WRLWLWLGLLSPTLGLTWGCLATGSHRWQRRSLWGWAGLAAAIAGIPLPWFPH--KLGLA 134

Query: 395 LIL*T*HTPHPSMLDRGMAGSTHLSRFPAIVLVMHL 502
            I  T   P  S L +   G   L   P +  V+ L
Sbjct: 135 AIAAT--VPAASWLAQRCRGQAWLRFLPTLWGVLFL 168