BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912367|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_C06.
         (531 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4R3D6|ZMYM5_MACFA Zinc finger MYM-type protein 5 (Fragment) ...    37   0.046
sp|Q9UJ78|ZMYM5_HUMAN Zinc finger MYM-type protein 5 OS=Homo sap...    37   0.046
sp|A6QPH9|ZMYM5_BOVIN Zinc finger MYM-type protein 5 OS=Bos taur...    31   4.3  
sp|Q8TEX9|IPO4_HUMAN Importin-4 OS=Homo sapiens GN=IPO4 PE=1 SV=2      31   4.3  
sp|P25808|SPB4_YEAST ATP-dependent rRNA helicase SPB4 OS=Sacchar...    30   5.6  
sp|A7A237|SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 OS=Sacchar...    30   5.6  
sp|Q96EV2|RBM33_HUMAN RNA-binding protein 33 OS=Homo sapiens GN=...    30   7.2  
sp|Q2L4W6|SPO5_SCHPO Sporulation-specific protein 5 OS=Schizosac...    30   7.3  
sp|Q8CXB4|UVRC_OCEIH UvrABC system protein C OS=Oceanobacillus i...    30   9.5  

>sp|Q4R3D6|ZMYM5_MACFA Zinc finger MYM-type protein 5 (Fragment)
           OS=Macaca fascicularis GN=ZMYM5 PE=2 SV=2
          Length = 656

 Score = 37.4 bits (85), Expect = 0.046
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -1

Query: 336 KNYQESIQPILQSLNAATWHQRPRA*TLLSTPTLPEN----IKNFQAPRVGTGKK 184
           KN+++SI P++ S +  TW   PR   +    TL EN    ++NF  P+  TG+K
Sbjct: 494 KNFEDSIVPVVLSADPGTW---PRILNIKQRDTLVENVPPQVRNFNFPKDNTGRK 545


>sp|Q9UJ78|ZMYM5_HUMAN Zinc finger MYM-type protein 5 OS=Homo
           sapiens GN=ZMYM5 PE=1 SV=4
          Length = 669

 Score = 37.4 bits (85), Expect = 0.046
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -1

Query: 336 KNYQESIQPILQSLNAATWHQRPRA*TLLSTPTLPEN----IKNFQAPRVGTGKK 184
           KN+++SI P++ S +  TW   PR   +    TL EN    ++NF  P+  TG+K
Sbjct: 507 KNFEDSIVPVVLSADPGTW---PRILNIKQRDTLVENVPPQVRNFNFPKDNTGRK 558


>sp|A6QPH9|ZMYM5_BOVIN Zinc finger MYM-type protein 5 OS=Bos taurus
           GN=ZMYM5 PE=2 SV=2
          Length = 673

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = -1

Query: 336 KNYQESIQPILQSLNAATWHQRPRA*TLLSTPTLPEN----IKNFQAPRVGTGKK 184
           K  ++SI P + S +  TW   PR  ++    TL EN    ++NF  P+  TG+K
Sbjct: 507 KPSEDSIIPAVLSADPGTW---PRILSIKQRDTLVENDPPQVRNFNFPKDSTGRK 558


>sp|Q8TEX9|IPO4_HUMAN Importin-4 OS=Homo sapiens GN=IPO4 PE=1 SV=2
          Length = 1081

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 444 SQMRRMSPLALTSLRR*PIKHGQTHCKACSSRCPYVKNYQESIQPILQSL 295
           S  R + PL L  L+  P+ H     KAC +   +V+N    +QP L  L
Sbjct: 431 SYSREVMPLLLAYLKSVPLGHTHHLAKACYALENFVENLGPKVQPYLPEL 480


>sp|P25808|SPB4_YEAST ATP-dependent rRNA helicase SPB4
           OS=Saccharomyces cerevisiae GN=SPB4 PE=1 SV=1
          Length = 606

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 132 VLDSVKMPSSAASGFKLKTMDEGDPIINMSSVLPNLAILR 13
           VLD ++MP+   S   +  MDE D +++MS +     ILR
Sbjct: 152 VLDFLQMPAVKTSACSMVVMDEADRLLDMSFIKDTEKILR 191


>sp|A7A237|SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
           OS=Saccharomyces cerevisiae (strain YJM789) GN=SPB4 PE=3
           SV=1
          Length = 606

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 132 VLDSVKMPSSAASGFKLKTMDEGDPIINMSSVLPNLAILR 13
           VLD ++MP+   S   +  MDE D +++MS +     ILR
Sbjct: 152 VLDFLQMPAVKTSACSMVVMDEADRLLDMSFIKDTEKILR 191


>sp|Q96EV2|RBM33_HUMAN RNA-binding protein 33 OS=Homo sapiens
           GN=RBM33 PE=1 SV=3
          Length = 1170

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 370 LQSLQQQVPLCEKLPRKHSAHPAKP*CSHMAPAAES 263
           ++SL Q  PL   LP +H  HP+ P   HM P  E+
Sbjct: 332 IRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLET 367


>sp|Q2L4W6|SPO5_SCHPO Sporulation-specific protein 5
           OS=Schizosaccharomyces pombe GN=spo5 PE=1 SV=1
          Length = 567

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -1

Query: 384 HGQTHCKACSSRCPYVKNYQESIQPILQSLNAATWH--QRPRA*TLLSTPTLPENIKNFQ 211
           H   H    ++   Y+K Y +++ P + SLN    H   +P     + + T+P N  +  
Sbjct: 170 HQSVHPYHVNNTHQYLKPYVQNVYPQMPSLNQPGLHIVNQPTYLAPVPSATVPTNSVSLS 229

Query: 210 APRVGTGKKN 181
            P    G+KN
Sbjct: 230 MPSFSQGQKN 239


>sp|Q8CXB4|UVRC_OCEIH UvrABC system protein C OS=Oceanobacillus
           iheyensis GN=uvrC PE=3 SV=1
          Length = 596

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 369 CKACSSRCPYVKNYQESIQPI 307
           CKAC+   P VK YQE +Q I
Sbjct: 167 CKACAENPPSVKEYQEIVQEI 187

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912367|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_C06.
         (531 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******