BP912381 |
Clone id |
YMU001_000018_D08 |
Library |
YMU01 |
Length |
558 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000018_D08. |
Accession |
BP912381 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGGACTACTTGGCTTTAAAATACTTTCAGCCGTTAACACTTGCAAAACAAGTTTTGAAG TTGAAAAGCCGACTATCCCTTGTCTGGTGACACCTGCAGAATCATCCATATAAGATGATC CTAGAGAAGTGCGGTTCGATGTATTTGCCTTCCGCTGTTTGTCATACATTACAGCATTAT GGCCAATACTTTGGCAAGCCACAAGCATAGTTTGCAGTACTGTGTTTGGATCAGACGATG GACAGATAACATAATATGCGAGGCAAGGACCATTCTCGTGTTCTCGTTGAGCAGTATTAC TGGCCGACACTGGAAGTGTTTTACAGGCTTTAGAAAGTGCTTTTAGGAATTCGTGTGGAT TCCAAACTTTATCAAAACTTGTTACATAATTATTCAAAGCACACGCAGATTCCAAGGGTC CCTGCTGCTGTGATGCTTGTAGAGGATAGTCCATGGCCAAAAAACCAGAAACGGTATTTT TTCCAATTGTTGGAAGGAGGTGGTTTTGTCCAAACATCATGTTACCTGCCACATGACTGC CTAGCATGCACGCTTCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P70587 |
Definition |
sp|P70587|LRRC7_RAT Leucine-rich repeat-containing protein 7 OS=Rattus norvegicus |
Align length |
102 |
Score (bit) |
32.0 |
E-value |
2.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RVI0 |
Definition |
tr|A9RVI0|A9RVI0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
190 |
Score (bit) |
109.0 |
E-value |
9.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912381|Adiantum capillus-veneris mRNA, clone: YMU001_000018_D08. (558 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RVI0|A9RVI0_PHYPA Predicted protein OS=Physcomitrella paten... 109 9e-23 tr|A9TD37|A9TD37_PHYPA Predicted protein OS=Physcomitrella paten... 106 7e-22 tr|Q9C8A3|Q9C8A3_ARATH Acetyl-CoA synthetase, putative; 45051-31... 95 2e-18 tr|Q8GXD0|Q8GXD0_ARATH Putative acetyl-CoA synthetase OS=Arabido... 92 1e-17 tr|A7P090|A7P090_VITVI Chromosome chr6 scaffold_3, whole genome ... 87 6e-16 tr|A5BD64|A5BD64_VITVI Putative uncharacterized protein OS=Vitis... 87 6e-16 tr|B8AYR9|B8AYR9_ORYSI Putative uncharacterized protein OS=Oryza... 75 3e-12 tr|Q0DHR5|Q0DHR5_ORYSJ Os05g0447500 protein OS=Oryza sativa subs... 63 9e-09 tr|A5BLK8|A5BLK8_VITVI Putative uncharacterized protein OS=Vitis... 37 0.95 tr|A8NE38|A8NE38_COPC7 Putative uncharacterized protein OS=Copri... 35 2.8 tr|Q4P3G0|Q4P3G0_USTMA Putative uncharacterized protein OS=Ustil... 35 3.6 tr|Q22PH4|Q22PH4_TETTH Putative uncharacterized protein OS=Tetra... 34 4.6 tr|A8NLN6|A8NLN6_COPC7 Putative uncharacterized protein OS=Copri... 34 4.7 tr|A5C198|A5C198_VITVI Putative uncharacterized protein OS=Vitis... 34 6.2 tr|A5BT46|A5BT46_VITVI Putative uncharacterized protein OS=Vitis... 34 6.2 tr|A5B363|A5B363_VITVI Putative uncharacterized protein OS=Vitis... 34 6.2 tr|A5C4K2|A5C4K2_VITVI Putative uncharacterized protein OS=Vitis... 33 8.1
>tr|A9RVI0|A9RVI0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161291 PE=4 SV=1 Length = 2216
Score = 109 bits (273), Expect = 9e-23 Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 5/190 (2%) Frame = -3
Query: 556 EACMLGSHVAGNMMFGQNHLLPTIGKNTVSGFLAMDYP----LQASQQQGPLESACALNN 389 E C LGSH+ GQ+ + + K +SGF +D A ++ + Sbjct: 1312 EVCRLGSHMPVGTAAGQSGSIASSSKQALSGFSLVDISGVSHSTARREYFTASNYSLAKA 1371
Query: 388 YVTSFDKVWNPHEFLKALSKACKTLPVSA-SNTAQREHENGPCLAYYVICPSSDPNTVLQ 212 +V WN E+ KAL KACK LP+S+ S+ +QRE E GPC YV+CP SDP +LQ Sbjct: 1372 FVADMTANWNMAEYRKALKKACKALPISSGSSVSQREPEQGPCTVVYVVCPVSDPAGILQ 1431
Query: 211 TMLVACQSIGHNAVMYDKQRKANTSNRTSLGSSYMDDSAGVTRQGIVGFSTSKLVLQVLT 32 M+ AC S+G D QR ++ SS I+GFS + LQ++T Sbjct: 1432 IMVDACTSLGSGITGADSQRHGPSTPGEDAMSS-----------NILGFSIPRFALQLVT 1480
Query: 31 AESILKPSSP 2 AE+I K S P Sbjct: 1481 AETIFKNSGP 1490
>tr|A9TD37|A9TD37_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193900 PE=4 SV=1 Length = 793
Score = 106 bits (265), Expect = 7e-22 Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 5/190 (2%) Frame = -3
Query: 556 EACMLGSHVAGNMMFGQNHLLPTIGKNTVSGFLAMDYP-LQASQQQGPLESACALN---N 389 E C LGSH+ G + + K ++SGF +D P + S +G +A + Sbjct: 9 EICRLGSHLPSGTAAGPTGSVGSFSKQSLSGFTLVDVPGVSHSGARGEFHNASNYSLAKA 68
Query: 388 YVTSFDKVWNPHEFLKALSKACKTLPVSASNTA-QREHENGPCLAYYVICPSSDPNTVLQ 212 ++ WN E+ KAL K CK LP+S+ ++A QRE E GP YV+CP SDP +LQ Sbjct: 69 FMGDMAANWNMAEYRKALRKVCKALPLSSGSSANQRELELGPSTVVYVVCPVSDPAGILQ 128
Query: 211 TMLVACQSIGHNAVMYDKQRKANTSNRTSLGSSYMDDSAGVTRQGIVGFSTSKLVLQVLT 32 TM+ AC S+G D QR A +++ G M S ++GFS + LQ++T Sbjct: 129 TMVDACASLGSAITGADSQRHAPSTS----GEDTMPPS-------LLGFSNPRFCLQLIT 177
Query: 31 AESILKPSSP 2 AE+I K S P Sbjct: 178 AETIFKSSGP 187
>tr|Q9C8A3|Q9C8A3_ARATH Acetyl-CoA synthetase, putative; 45051-31547 OS=Arabidopsis thaliana GN=F7A10.14 PE=1 SV=1 Length = 2655
Score = 95.1 bits (235), Expect = 2e-18 Identities = 58/185 (31%), Positives = 103/185 (55%), Gaps = 4/185 (2%) Frame = -3
Query: 544 LGSHVAGNMMFGQNHLLPTIGKNTVSGFLAMDYPLQASQQQGPLESACALNNYVTSFDKV 365 LG+H+ ++ N + +G+ + SGF+ +D P + +L++Y S Sbjct: 1894 LGTHLPQSL---GNQMEKDVGRLSSSGFVLLDCPQSMKIESNNTSLLGSLSDYFLSLSNG 1950
Query: 364 WNPHEFLKALSKACKTLPV-SASNTAQREHENGPCLAYYVICPSSDPNTVLQTMLVACQS 188 WN + +LK+LSKA K L + S T Q+E PC+ Y++CP DP+ VL+T++ + + Sbjct: 1951 WNVNSYLKSLSKALKGLKLGSGLYTNQKEGSGSPCVVVYIVCPFPDPSAVLRTIVESSIA 2010
Query: 187 IGHNAVMYDKQRKA--NTSNRTSLGSSYMDDSAGVTRQGIV-GFSTSKLVLQVLTAESIL 17 +G + + D+ R++ N+ + SS D A ++ ++ GFS KLVLQV++ +SI Sbjct: 2011 LG-SVIQSDRDRRSILNSQVARAFSSSTAVDEASISHIPVLSGFSVPKLVLQVVSVDSIF 2069
Query: 16 KPSSP 2 + +SP Sbjct: 2070 RITSP 2074
>tr|Q8GXD0|Q8GXD0_ARATH Putative acetyl-CoA synthetase OS=Arabidopsis thaliana GN=At1g55320/F7A10_14 PE=2 SV=1 Length = 767
Score = 92.4 bits (228), Expect = 1e-17 Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 4/166 (2%) Frame = -3
Query: 487 IGKNTVSGFLAMDYPLQASQQQGPLESACALNNYVTSFDKVWNPHEFLKALSKACKTLPV 308 +G+ + SGF+ +D P + +L++Y S WN + +LK+LSKA K L + Sbjct: 5 VGRLSSSGFVLLDCPQSMKIESNNTSLLGSLSDYFLSLSNGWNVNSYLKSLSKALKGLKL 64
Query: 307 -SASNTAQREHENGPCLAYYVICPSSDPNTVLQTMLVACQSIGHNAVMYDKQRKA--NTS 137 S T Q+E PC+ Y++CP DP+ VL+T++ + ++G + + D+ R++ N+ Sbjct: 65 GSGLYTNQKEGSGSPCVVVYIVCPFPDPSAVLRTIVESSIALG-SVIQSDRDRRSILNSQ 123
Query: 136 NRTSLGSSYMDDSAGVTRQGIV-GFSTSKLVLQVLTAESILKPSSP 2 + SS D A ++ ++ GFS KLVLQV++ +SI + +SP Sbjct: 124 VARAFSSSTAVDEASISHIPVLSGFSVPKLVLQVVSVDSIFRITSP 169
>tr|A7P090|A7P090_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024815001 PE=4 SV=1 Length = 863
Score = 87.0 bits (214), Expect = 6e-16 Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Frame = -3
Query: 556 EACMLGSHVAGNMMFGQNHLLPTIGKNTVSGFLAMDYPLQASQQQGPLESACALNNYVTS 377 E C LG+H ++ N + GK + SGF+ +D P + +++++ S Sbjct: 70 ETCKLGTHTPQSL---GNQMEVDSGKLSSSGFVLLDCPQSMKIESSNSSLLGSISDFFLS 126
Query: 376 FDKVWNPHEFLKALSKACKTLPV-SASNTAQREHENGPCLAYYVICPSSDPNTVLQTMLV 200 W+ FLK+LSK KTL + S T +E +GPC YV+CP +P +L+T++ Sbjct: 127 LSNGWDLTGFLKSLSKVLKTLKLGSCLATNPKEGISGPCTVIYVVCPFPEPIALLRTVIE 186
Query: 199 ACQSIGHNAVMYDKQRKANTSNRTSLGSS---YMDDSAGVTRQGIVGFSTSKLVLQVLTA 29 ++G + DK+R++ ++ S +D+++ + GFS KLV+Q++T Sbjct: 187 TSVAVGSVILSSDKERRSILQSQVGKALSCPAAVDEASMSNILTLSGFSIPKLVIQIVTV 246
Query: 28 ESILKPSSP 2 ++I + +SP Sbjct: 247 DAIFRVTSP 255
>tr|A5BD64|A5BD64_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024990 PE=4 SV=1 Length = 893
Score = 87.0 bits (214), Expect = 6e-16 Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%) Frame = -3
Query: 556 EACMLGSHVAGNMMFGQNHLLPTIGKNTVSGFLAMDYPLQASQQQGPLESACALNNYVTS 377 E C LG+H ++ N + GK + SGF+ +D P + +++++ S Sbjct: 131 ETCKLGTHTPQSL---GNQMEVDSGKLSSSGFVLLDCPQSMKIESSNSSLLGSISDFFLS 187
Query: 376 FDKVWNPHEFLKALSKACKTLPV-SASNTAQREHENGPCLAYYVICPSSDPNTVLQTMLV 200 W+ FLK+LSK KTL + S T +E +GPC YV+CP +P +L+T++ Sbjct: 188 LSNGWDLTGFLKSLSKVLKTLKLGSCLATNPKEGISGPCTVIYVVCPFPEPIALLRTVIE 247
Query: 199 ACQSIGHNAVMYDKQRKANTSNRTSLGSS---YMDDSAGVTRQGIVGFSTSKLVLQVLTA 29 ++G + DK+R++ ++ S +D+++ + GFS KLV+Q++T Sbjct: 248 TSVAVGSVILSSDKERRSILQSQVGKALSCPAAVDEASMSNILTLSGFSIPKLVIQIVTV 307
Query: 28 ESILKPSSP 2 ++I + +SP Sbjct: 308 DAIFRVTSP 316
>tr|B8AYR9|B8AYR9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20152 PE=4 SV=1 Length = 2010
Score = 74.7 bits (182), Expect = 3e-12 Identities = 41/152 (26%), Positives = 83/152 (54%), Gaps = 4/152 (2%) Frame = -3
Query: 445 PLQASQQQGPLESACALNNYVTSFDKVWNPHEFLKALSKACKTLPVSASNTA-QREHENG 269 P Q G S + + Y+ + + W F+ +L++ K + +++S A Q+E +G Sbjct: 1265 PDQVKIGNGHSSSISSTSEYLQALSRNWTVKSFVTSLTRVIKDIKLNSSILANQKESTSG 1324
Query: 268 PCLAYYVICPSSDPNTVLQTMLVACQSIGHNAVMYDKQRKANTSNRTSLG---SSYMDDS 98 PC YV+CP +P+ VL+T++ ++G + +++RK+ ++ + ++ +D+S Sbjct: 1325 PCTVIYVVCPFPEPSAVLETLVECSVALGSVMLSPERERKSFLYSQVAKALNCNASVDES 1384
Query: 97 AGVTRQGIVGFSTSKLVLQVLTAESILKPSSP 2 + + GFS KLVLQ++T E++L+ P Sbjct: 1385 SASNVVMLSGFSIPKLVLQIVTVETLLRLHKP 1416
>tr|Q0DHR5|Q0DHR5_ORYSJ Os05g0447500 protein OS=Oryza sativa subsp. japonica GN=Os05g0447500 PE=4 SV=1 Length = 2036
Score = 63.2 bits (152), Expect = 9e-09 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 1/186 (0%) Frame = -3
Query: 556 EACMLGSHVAGNMMFGQNHLLPTIGKNTVSGFLAMDYPLQASQQQGPLESACALNNYVTS 377 E C LG+H N GQ L P GK SG + + P Q G S + + Y+ + Sbjct: 1276 EVCKLGTHSPQNSG-GQMELSP--GKYLSSGLVLTECPDQVKIGNGHSSSISSTSEYLQA 1332
Query: 376 FDKVWNPHEFLKALSKACKTLPVSASNTA-QREHENGPCLAYYVICPSSDPNTVLQTMLV 200 + W F+ +L++ K + +++S A Q+E +GPC A N+ L+ Sbjct: 1333 LSRNWTVKSFVTSLTRVIKDIKLNSSILANQKESTSGPCTA----------NSSNMITLI 1382
Query: 199 ACQSIGHNAVMYDKQRKANTSNRTSLGSSYMDDSAGVTRQGIVGFSTSKLVLQVLTAESI 20 + +Y + KA N + +D+S+ + GFS KLVLQ++T E++ Sbjct: 1383 IHAERERKSFLYSQVAKALNCNAS------VDESSASNVVMLSGFSIPKLVLQIVTVETL 1436
Query: 19 LKPSSP 2 L+ P Sbjct: 1437 LRLHKP 1442
>tr|A5BLK8|A5BLK8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007992 PE=4 SV=1 Length = 442
Score = 36.6 bits (83), Expect = 0.95 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = +1
Query: 295 YYWPTLEVFYRL*KVLLGIRVDSKLYQNLLHNYSKHTQIPRVPAAVMLVEDSPWP 459 YYWPT+ + DSK Y +H IPR+P+ V+ +PWP Sbjct: 337 YYWPTM-------------KQDSKAYVKKCDRCQRHALIPRMPSEVLNPITNPWP 378
>tr|A8NE38|A8NE38_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_12654 PE=4 SV=1 Length = 222
Score = 35.0 bits (79), Expect = 2.8 Identities = 22/81 (27%), Positives = 33/81 (40%) Frame = +1
Query: 292 QYYWPTLEVFYRL*KVLLGIRVDSKLYQNLLHNYSKHTQIPRVPAAVMLVEDSPWPKNQK 471 QY+WPT+ F + K + G + ++ KHTQ PR + + D PW Sbjct: 92 QYWWPTMRAFVK--KYVEGCDICAR---------KKHTQHPRASTQPLEIPDGPWETVGV 140
Query: 472 RYFFQLLEGGGFVQTSCYLPH 534 QL E G ++ H Sbjct: 141 DLITQLPEASGHDAIIVFVDH 161
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