BP912387
Clone id YMU001_000018_E02
Library
Length 503
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000018_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACATAGAATCTACATCCAACTTCTGGTTGTTCGAGCCACCTGACATCCATGCATATTATC
GTACACATCCCTCCCACAAGCTCAAAGGGGAGAAGGAAAACAACGATTGCCCTTGCTCAT
CCAGAGGTGGCAGCAACTAAGATCCTGCAGACAGACAGATGGCAGATTCTCTCAAATACT
CAAACCTTTTGGCTCATGGCTTCCAGATTCCTAGTCGCACAAATAGTTGGACGCCTTGAA
GGTGTGAAGACCCACGGTGTAGTCAGTATTACCCTCTGTACCAGAAAGAAGGGTAATGCC
TGACAATGACTGTCCTGTCCCAGAAAACTCTATGGATGCTATCACCTTGATCTTTGGTAG
AAGCTTTCCCTCCACATCTGCATCACTCAAATCAGAATCCAAAGGCATCTGCGCGCGAAG
ACAACCTGGCGGACCTTGCAACGGAACCTCCTGCACATGCCAACTGATTGCCTTCAAATG
CTGATTGAGTAACCCCTTCGGTC
■■Homology search results ■■ -
sp_hit_id Q810L3
Definition sp|Q810L3|CHFR_MOUSE E3 ubiquitin-protein ligase CHFR OS=Mus musculus
Align length 60
Score (bit) 32.0
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912387|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_E02.
(503 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q810L3|CHFR_MOUSE E3 ubiquitin-protein ligase CHFR OS=Mus mus... 32 1.7
sp|Q9H0B8|CRLD2_HUMAN Cysteine-rich secretory protein LCCL domai... 31 2.9
sp|Q2TZ06|SIP5_ASPOR Protein sip5 OS=Aspergillus oryzae GN=sip5 ... 31 3.7
sp|P12263|FA8_PIG Coagulation factor VIII OS=Sus scrofa GN=F8 PE... 31 3.7
sp|P0AD06|YECA_SHIFL Uncharacterized protein yecA OS=Shigella fl... 30 4.9
sp|P0AD05|YECA_ECOLI Uncharacterized protein yecA OS=Escherichia... 30 4.9
sp|A9HDB1|HLDE_GLUDA Bifunctional protein hldE OS=Gluconacetobac... 30 4.9
sp|A3CLY6|ARGB_STRSV Acetylglutamate kinase OS=Streptococcus san... 30 4.9
sp|A8AYI5|ARGB_STRGC Acetylglutamate kinase OS=Streptococcus gor... 30 4.9
sp|Q86SQ4|GP126_HUMAN Probable G-protein coupled receptor 126 OS... 30 6.4
sp|Q1DZ34|SIP5_COCIM Protein SIP5 OS=Coccidioides immitis GN=SIP... 30 8.3
sp|Q9UL26|RB22A_HUMAN Ras-related protein Rab-22A OS=Homo sapien... 30 8.3
sp|Q06203|PUR1_HUMAN Amidophosphoribosyltransferase OS=Homo sapi... 30 8.3

>sp|Q810L3|CHFR_MOUSE E3 ubiquitin-protein ligase CHFR OS=Mus
musculus GN=Chfr PE=1 SV=1
Length = 664

Score = 32.0 bits (71), Expect = 1.7
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2

Query: 287 RRVMPDNDCPVPENSMDAITLIFGRSFPSTSASLKSESKGICARRQPGGPCNGTS--CTC 460
R+ + CPVPE+ + A TL G PSTSASL + + P G+ CTC
Sbjct: 435 RQAVQSLPCPVPESELGA-TLALGGEAPSTSASLPTAAPDYMC------PLQGSHAICTC 487


>sp|Q9H0B8|CRLD2_HUMAN Cysteine-rich secretory protein LCCL
domain-containing 2 OS=Homo sapiens GN=CRISPLD2 PE=1
SV=1
Length = 497

Score = 31.2 bits (69), Expect = 2.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3

Query: 177 YSNLLAHGFQIPSRTNSWTP*RCEDPRCSQY 269
Y + + + PS N W P RC P C+ Y
Sbjct: 132 YDEVKDYTYPYPSECNPWCPERCSGPMCTHY 162


>sp|Q2TZ06|SIP5_ASPOR Protein sip5 OS=Aspergillus oryzae GN=sip5
PE=3 SV=1
Length = 819

Score = 30.8 bits (68), Expect = 3.7
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +3

Query: 246 EDPRCSQYYPLYQKEG*CLTMTVLSQKTLWMLSP*SLVEAFPPHLHHSNQNPKASAREDN 425
E P C YYP Y C + S+ + + P + PP S+ N A+A E +
Sbjct: 283 ECPICFLYYPPYLNRTRCCDQPICSECFVQIKRP----DPHPPEHGDSDPNAPAAAAEGD 338

Query: 426 LAD-----LATEPPA 455
AD L +EP A
Sbjct: 339 AADNQDSQLVSEPAA 353


>sp|P12263|FA8_PIG Coagulation factor VIII OS=Sus scrofa GN=F8 PE=2
SV=2
Length = 2133

Score = 30.8 bits (68), Expect = 3.7
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Frame = +3

Query: 27 LFEPPDIHAYYRTHPSH-----KLKGEKENNDCPCSSR--GGSN*DPADRQMADSLKYSN 185
+F PP + Y R HP+H L+ E D S G N +D Q+ S SN
Sbjct: 1940 IFNPPIVARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMQNKAISDSQITASSHLSN 1999

Query: 186 LLA------HGFQIPSRTNSWTP 236
+ A + RTN+W P
Sbjct: 2000 IFATWSPSQARLHLQGRTNAWRP 2022


>sp|P0AD06|YECA_SHIFL Uncharacterized protein yecA OS=Shigella
flexneri GN=yecA PE=4 SV=1
Length = 221

Score = 30.4 bits (67), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 8/35 (22%)
Frame = +3

Query: 42 DIHAYYRTHPSHK-----LKGEKE---NNDCPCSS 122
D+HAY+ HP K +K E++ N+ CPC S
Sbjct: 177 DLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGS 211


>sp|P0AD05|YECA_ECOLI Uncharacterized protein yecA OS=Escherichia
coli (strain K12) GN=yecA PE=4 SV=1
Length = 221

Score = 30.4 bits (67), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 8/35 (22%)
Frame = +3

Query: 42 DIHAYYRTHPSHK-----LKGEKE---NNDCPCSS 122
D+HAY+ HP K +K E++ N+ CPC S
Sbjct: 177 DLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGS 211


>sp|A9HDB1|HLDE_GLUDA Bifunctional protein hldE OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=hldE PE=3 SV=1
Length = 484

Score = 30.4 bits (67), Expect = 4.9
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = -1

Query: 323 LGQDSHCQALPFFLVQRVILTTPWVFTPSRRPTICATRNLEAMSQKV 183
+G+D+ QAL L QR LT V T +R PTIC TR + A Q V
Sbjct: 68 VGRDTPGQALRGLLGQRPGLTDALVETGAR-PTICKTRFIAANQQVV 113


>sp|A3CLY6|ARGB_STRSV Acetylglutamate kinase OS=Streptococcus
sanguinis (strain SK36) GN=argB PE=3 SV=1
Length = 245

Score = 30.4 bits (67), Expect = 4.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3

Query: 375 VEGKLLPKIKVIASIEFSGTGQSLSGITLLSGT 277
++G ++PKI+ SG GQ L G LL+GT
Sbjct: 208 IKGGMIPKIESAVQTVLSGVGQVLIGDNLLTGT 240


>sp|A8AYI5|ARGB_STRGC Acetylglutamate kinase OS=Streptococcus
gordonii (strain Challis / ATCC 35105 / CH1 / DL1 /
V288) GN=argB PE=3 SV=1
Length = 245

Score = 30.4 bits (67), Expect = 4.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3

Query: 375 VEGKLLPKIKVIASIEFSGTGQSLSGITLLSGT 277
++G ++PKI+ SG GQ L G LL+GT
Sbjct: 208 IKGGMIPKIESAVQTVLSGVGQVLIGDNLLTGT 240


>sp|Q86SQ4|GP126_HUMAN Probable G-protein coupled receptor 126
OS=Homo sapiens GN=GPR126 PE=1 SV=3
Length = 1221

Score = 30.0 bits (66), Expect = 6.4
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Frame = -3

Query: 399 DSDLSDADVEG-----KLLPKIKVIAS--IEFSGTGQSLSGITLLSGTEGNTDYTVGLHT 241
DSDL ++ E +L KI + ++ + + +LS +LL GT +++++GL +
Sbjct: 643 DSDLLESSSEALKTIDELAFKIDLNSTSHVNITTRNLALSVSSLLPGTNAISNFSIGLPS 702

Query: 240 FKASNYLCD*ESGSHEPKGLSI*ENLPSVCLQDLS 136
S + D ESG +P I LP L++LS
Sbjct: 703 NNESYFQMDFESGQVDPLASVI---LPPNLLENLS 734


tr_hit_id Q6Z0T9
Definition tr|Q6Z0T9|Q6Z0T9_ORYSJ Os08g0243900 protein OS=Oryza sativa subsp. japonica
Align length 96
Score (bit) 75.1
E-value 2.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912387|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_E02.
(503 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6Z0T9|Q6Z0T9_ORYSJ Os08g0243900 protein OS=Oryza sativa subs... 75 2e-12
tr|A3BR28|A3BR28_ORYSJ Putative uncharacterized protein OS=Oryza... 75 2e-12
tr|A2YSV1|A2YSV1_ORYSI Putative uncharacterized protein OS=Oryza... 75 2e-12
tr|Q9FKM4|Q9FKM4_ARATH Arabidopsis thaliana genomic DNA, chromos... 74 4e-12
tr|A7Q6E7|A7Q6E7_VITVI Chromosome chr11 scaffold_56, whole genom... 74 4e-12
tr|A5AR42|A5AR42_VITVI Putative uncharacterized protein OS=Vitis... 74 4e-12
tr|A9U164|A9U164_PHYPA Predicted protein OS=Physcomitrella paten... 68 2e-10
tr|Q4RPY1|Q4RPY1_TETNG Chromosome 17 SCAF15006, whole genome sho... 37 0.69
tr|B6IPQ3|B6IPQ3_RHOCS Phosphoglycerate mutase family protein OS... 37 0.69
tr|A9IF41|A9IF41_BORPD AcrB/AcrD/AcrF protein family OS=Bordetel... 37 0.69
tr|Q1GPY7|Q1GPY7_SPHAL Heavy metal efflux pump CzcA OS=Sphingopy... 36 1.2
tr|B4RIK8|B4RIK8_PHEZH Heavy metal efflux pump CzcA OS=Phenyloba... 36 1.2
tr|Q3U233|Q3U233_MOUSE Putative uncharacterized protein OS=Mus m... 35 2.6
tr|Q55G74|Q55G74_DICDI Putative uncharacterized protein OS=Dicty... 34 3.4
tr|Q1IXQ8|Q1IXQ8_DEIGD Peptidase S8, subtilisin-like protein OS=... 33 5.8
tr|Q3V0M3|Q3V0M3_MOUSE Putative uncharacterized protein OS=Mus m... 33 7.6
tr|A1TXN0|A1TXN0_MARAV Phage integrase family protein OS=Marinob... 33 9.9

>tr|Q6Z0T9|Q6Z0T9_ORYSJ Os08g0243900 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0070J06.32 PE=2 SV=1
Length = 641

Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = -3

Query: 501 PKGLLNQHLKAISWHVQEVPLQGPPGCLRAQMPLDSDLSDADVEGKLLPKIKVIASIEFS 322
PK +LN+ + + WH+ ++PL+GP G LRA+MP+D D D ++E V+ ++F+
Sbjct: 553 PKAVLNRAERELRWHIPDIPLKGPAGRLRARMPVDQDSKDGELE--------VVGMVKFA 604

Query: 321 GTGQ-SLSGITLLSGTEGNTDYTVGLHTFKASNYLC 217
G +LSGI L T+G + HTF + +YLC
Sbjct: 605 YQGPFTLSGIKLCPATDGTAQFNEAGHTFSSGSYLC 640


>tr|A3BR28|A3BR28_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_025500 PE=4 SV=1
Length = 622

Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = -3

Query: 501 PKGLLNQHLKAISWHVQEVPLQGPPGCLRAQMPLDSDLSDADVEGKLLPKIKVIASIEFS 322
PK +LN+ + + WH+ ++PL+GP G LRA+MP+D D D ++E V+ ++F+
Sbjct: 534 PKAVLNRAERELRWHIPDIPLKGPAGRLRARMPVDQDSKDGELE--------VVGMVKFA 585

Query: 321 GTGQ-SLSGITLLSGTEGNTDYTVGLHTFKASNYLC 217
G +LSGI L T+G + HTF + +YLC
Sbjct: 586 YQGPFTLSGIKLCPATDGTAQFNEAGHTFSSGSYLC 621


>tr|A2YSV1|A2YSV1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_28397 PE=4 SV=1
Length = 640

Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = -3

Query: 501 PKGLLNQHLKAISWHVQEVPLQGPPGCLRAQMPLDSDLSDADVEGKLLPKIKVIASIEFS 322
PK +LN+ + + WH+ ++PL+GP G LRA+MP+D D D ++E V+ ++F+
Sbjct: 552 PKAVLNRAERELRWHIPDIPLKGPAGRLRARMPVDQDSKDGELE--------VVGMVKFA 603

Query: 321 GTGQ-SLSGITLLSGTEGNTDYTVGLHTFKASNYLC 217
G +LSGI L T+G + HTF + +YLC
Sbjct: 604 YQGPFTLSGIKLCPATDGTAQFNEAGHTFSSGSYLC 639


>tr|Q9FKM4|Q9FKM4_ARATH Arabidopsis thaliana genomic DNA, chromosome
5, P1 clone:MUA2 (Putative uncharacterized protein
At5g57460) (At5g57460) OS=Arabidopsis thaliana
GN=At5g57460 PE=2 SV=1
Length = 646

Score = 73.9 bits (180), Expect = 4e-12
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = -3

Query: 501 PKGLLNQHLKAISWHVQEVPLQGPPGCLRAQMPLDSDLSDADVEGKLLPKIKVIASIEFS 322
PK +LN+ + + W + E+PL G PG LRA+MP+DSD S+ + + +I ++FS
Sbjct: 558 PKAILNRTDRELKWQIPEIPLNGSPGRLRARMPIDSDNSEEEPD--------IICYVKFS 609

Query: 321 GTGQ-SLSGITLLSGTEGNTDYTVGLHTFKASNYLCD 214
G SLSGI+L + EGNTD+ H ++ Y+C+
Sbjct: 610 VQGNTSLSGISLRAAAEGNTDFFEVDHRYETGVYMCN 646


>tr|A7Q6E7|A7Q6E7_VITVI Chromosome chr11 scaffold_56, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00031365001
PE=4 SV=1
Length = 597

Score = 73.9 bits (180), Expect = 4e-12
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = -3

Query: 501 PKGLLNQHLKAISWHVQEVPLQGPPGCLRAQMPLDSDLSDADVEGKLLPKIKVIASIEFS 322
PK +LN+ + + WHV E+P +G PG LR +MP+DS+ D E I+V+ ++FS
Sbjct: 507 PKAVLNRSERELRWHVPEIPQKGAPGRLRVRMPVDSNEEDGGEE------IEVVGYVKFS 560

Query: 321 GTG-QSLSGITLLSGTEGNTDYTVGLHTFKASNYLCD 214
G +SLSG++L +EG TD+ H +++ Y+C+
Sbjct: 561 AQGMRSLSGVSLRPASEGKTDFYEVNHRYESGVYMCN 597


>tr|A5AR42|A5AR42_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_027870 PE=4 SV=1
Length = 617

Score = 73.9 bits (180), Expect = 4e-12
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = -3

Query: 501 PKGLLNQHLKAISWHVQEVPLQGPPGCLRAQMPLDSDLSDADVEGKLLPKIKVIASIEFS 322
PK +LN+ + + WHV E+P +G PG LR +MP+DS+ D E I+V+ ++FS
Sbjct: 527 PKAVLNRSERELRWHVPEIPQKGAPGRLRVRMPVDSNEEDGGEE------IEVVGYVKFS 580

Query: 321 GTG-QSLSGITLLSGTEGNTDYTVGLHTFKASNYLCD 214
G +SLSG++L +EG TD+ H +++ Y+C+
Sbjct: 581 AQGMRSLSGVSLRPASEGKTDFYEVNHRYESGVYMCN 617


>tr|A9U164|A9U164_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_227387 PE=4 SV=1
Length = 631

Score = 68.2 bits (165), Expect = 2e-10
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = -3

Query: 501 PKGLLNQHLKAISWHVQEVPLQGPPGCLRAQMPLDSDL-SDADVEGKLLPKIKVIASIEF 325
P+ L++ LK + W + + PP LRAQ+P+D+ S+ D G PKI+V + F
Sbjct: 537 PRAALDRTLKEVRWLIPSIEAASPPDWLRAQVPVDAKARSENDANGHEEPKIRV--RVLF 594

Query: 324 SGTGQSLSGITLLSGTEGNTDYTVGLHTFKASNYLC 217
S +G +LSG+ + +TD+ VG H+FKA +LC
Sbjct: 595 SCSGPTLSGLNIAPMKADSTDFIVGEHSFKAGQFLC 630


>tr|Q4RPY1|Q4RPY1_TETNG Chromosome 17 SCAF15006, whole genome
shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00030878001 PE=4 SV=1
Length = 1396

Score = 36.6 bits (83), Expect = 0.69
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +2

Query: 272 PSVPERRVMPDNDCPVPENSMDAITLIFGRSFPSTSASLKSESKGICARRQPGGPCNGTS 451
P PE V+ D D V S + T GR+ S A K S G C +PG NG
Sbjct: 340 PGNPEVLVVEDADIDVDVFSYNLGTCASGRNTCSQYADCKDYSSGFCCHCRPGFYGNGIQ 399

Query: 452 CTCQ 463
CT +
Sbjct: 400 CTAE 403


>tr|B6IPQ3|B6IPQ3_RHOCS Phosphoglycerate mutase family protein
OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=RC1_2369 PE=4 SV=1
Length = 209

Score = 36.6 bits (83), Expect = 0.69
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3

Query: 462 WHVQEVPLQGPPGCLRAQMPLDSDLSDADVEGKLLPKI 349
W V+ P+ PPG + Q+ L +DLSD D L P++
Sbjct: 12 WWVRHAPVAAPPGVIAGQLDLPADLSDRDGLAALAPRL 49


>tr|A9IF41|A9IF41_BORPD AcrB/AcrD/AcrF protein family OS=Bordetella
petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
GN=czcA PE=4 SV=1
Length = 1085

Score = 36.6 bits (83), Expect = 0.69
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = -1

Query: 209 NLEAMSQKV*VFERICHLSVCRILVAATSG*ARAIVVFL-LPFELVGGMCTIICMDVRWL 33
+L+A SQ++ + IC L++ +L A G RA+ VFL +P L GG+ T+ + +
Sbjct: 895 SLQAASQRLSIVVPICFLAIFVLLFMALGGFGRALSVFLAVPLGLAGGVFTLAMTGINFS 954

Query: 32 EQPEVG 15
VG
Sbjct: 955 VSAAVG 960