BP912405 |
Clone id |
YMU001_000018_F08 |
Library |
YMU01 |
Length |
557 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000018_F08. |
Accession |
BP912405 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2169Contig1 |
Sequence |
AGCGGATGCTGCTGTTCCAACGGATTTGTCATCCCAGGCAACGGACGAATCATTGGATGT GCCATCTCTCTCTCTGGGTTTGGAGCAGGCTCACATGTTAACAAGCTCTTCTACTGGTGA AGCAGCTCCAATCTTGGCAGAGAGTGGCAGGATGCAAGTTGTTCTGGATGCATCTGCAGA TGGCAGTAGCTTCATCTGTTTGCAATGTGGTGGGCTTGTCAGCGGCCATCGCAAAGATGA GCATATTGCGTATTGGTGTTCTCACTCTCGACAAGTGGTGTGAAGAGTTCTAGATTGTAT GAAAGCCCAGTAGTAAAGTGGCTTATAGGATGGTGGGGGAGGCCAGCATGGATATTTGGT TAGGTGCTCAAAACATGATGCCTATGCTGAGTCTGTCATCAAAAACCACGAGGCATTTGG AGTGTGTGGTTTGTTGTAAGCACTAGTGTTTGTCACACGGATTGTTTTGAGACGTCCGTC AGAGCCGTCTGCTTTGGTGTAACAAGGGCATTTGGCCCTTACTCAGGCTTTTCAAAATAA TGCCATACAGAGTGTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P97360 |
Definition |
sp|P97360|ETV6_MOUSE Transcription factor ETV6 OS=Mus musculus |
Align length |
43 |
Score (bit) |
34.7 |
E-value |
0.32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NN14 |
Definition |
tr|A9NN14|A9NN14_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
49 |
Score (bit) |
86.3 |
E-value |
1.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912405|Adiantum capillus-veneris mRNA, clone: YMU001_000018_F08. (557 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NN14|A9NN14_PICSI Putative uncharacterized protein OS=Picea... 86 1e-15 tr|A9NSL4|A9NSL4_PICSI Putative uncharacterized protein OS=Picea... 84 4e-15 tr|A7NU06|A7NU06_VITVI Chromosome chr18 scaffold_1, whole genome... 82 2e-14 tr|Q9FIJ8|Q9FIJ8_ARATH Arabidopsis thaliana genomic DNA, chromos... 82 3e-14 tr|Q3E8E9|Q3E8E9_ARATH Uncharacterized protein At5g47830.2 OS=Ar... 82 3e-14 tr|Q1ECG7|Q1ECG7_ARATH At5g47830 OS=Arabidopsis thaliana PE=2 SV=1 82 3e-14 tr|A9NYK9|A9NYK9_PICSI Putative uncharacterized protein OS=Picea... 82 3e-14 tr|A9SW11|A9SW11_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 4e-14 tr|B6U5J3|B6U5J3_MAIZE Putative uncharacterized protein OS=Zea m... 80 7e-14 tr|A9S6B0|A9S6B0_PHYPA Predicted protein OS=Physcomitrella paten... 78 4e-13 tr|Q6ET41|Q6ET41_ORYSJ Os02g0158600 protein OS=Oryza sativa subs... 77 5e-13 tr|A2X145|A2X145_ORYSI Putative uncharacterized protein OS=Oryza... 77 5e-13 tr|Q2HTP5|Q2HTP5_MEDTR Putative uncharacterized protein OS=Medic... 76 1e-12 tr|A3A3C3|A3A3C3_ORYSJ Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|B8BQ34|B8BQ34_THAPS Predicted protein OS=Thalassiosira pseudo... 44 0.008 tr|A9V135|A9V135_MONBE Predicted protein OS=Monosiga brevicollis... 35 2.1 tr|Q8C5E8|Q8C5E8_MOUSE Putative uncharacterized protein OS=Mus m... 35 3.6 tr|Q80WR3|Q80WR3_MOUSE Etv6 protein OS=Mus musculus GN=Etv6 PE=2... 35 3.6 tr|Q3U037|Q3U037_MOUSE Putative uncharacterized protein OS=Mus m... 35 3.6 tr|Q3KRD1|Q3KRD1_RAT Ets variant gene 6 (TEL oncogene) OS=Rattus... 35 3.6 tr|A0LVL3|A0LVL3_ACIC1 Glycoside hydrolase, family 9 OS=Acidothe... 33 7.9 tr|B4LUW4|B4LUW4_DROVI GJ17388 OS=Drosophila virilis GN=GJ17388 ... 33 7.9
>tr|A9NN14|A9NN14_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 173
Score = 86.3 bits (212), Expect = 1e-15 Identities = 40/49 (81%), Positives = 44/49 (89%) Frame = +2
Query: 125 APILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEHIAYWCSHSR 271 A ILAE+GRMQVV+DA ADGSSFICL+CGGLVS RKDEHIAYWCS +R Sbjct: 124 ASILAENGRMQVVMDAFADGSSFICLRCGGLVSNTRKDEHIAYWCSDAR 172
>tr|A9NSL4|A9NSL4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 173
Score = 84.3 bits (207), Expect = 4e-15 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = +2
Query: 125 APILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEHIAYWCS 262 A ILAE+GRMQVV+DA ADGSSFICL+CGGLVS RKDEHIAYWCS Sbjct: 124 ASILAENGRMQVVMDAFADGSSFICLRCGGLVSNTRKDEHIAYWCS 169
>tr|A7NU06|A7NU06_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014869001 PE=4 SV=1 Length = 167
Score = 82.0 bits (201), Expect = 2e-14 Identities = 36/43 (83%), Positives = 39/43 (90%) Frame = +2
Query: 131 ILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEHIAYWC 259 ILAE+GR Q+VLDA +DGSSFICLQCGGLVS HRKDEH AYWC Sbjct: 122 ILAETGRRQIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWC 164
>tr|Q9FIJ8|Q9FIJ8_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 OS=Arabidopsis thaliana PE=4 SV=1 Length = 202
Score = 81.6 bits (200), Expect = 3e-14 Identities = 42/78 (53%), Positives = 53/78 (67%) Frame = +2
Query: 32 SQATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCG 211 ++A +LD P+ S L T ++ IL +SGR Q++LDA ADGSSFICLQCG Sbjct: 125 TEAQPLALDEPTTSKDLFGTKQ-TVTADAHGISILEKSGRSQIMLDAFADGSSFICLQCG 183
Query: 212 GLVSGHRKDEHIAYWCSH 265 GLVS HR+DEH AYWCS+ Sbjct: 184 GLVSIHRRDEHYAYWCSN 201
>tr|Q3E8E9|Q3E8E9_ARATH Uncharacterized protein At5g47830.2 OS=Arabidopsis thaliana GN=At5g47830 PE=4 SV=1 Length = 123
Score = 81.6 bits (200), Expect = 3e-14 Identities = 42/78 (53%), Positives = 53/78 (67%) Frame = +2
Query: 32 SQATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCG 211 ++A +LD P+ S L T ++ IL +SGR Q++LDA ADGSSFICLQCG Sbjct: 46 TEAQPLALDEPTTSKDLFGTKQ-TVTADAHGISILEKSGRSQIMLDAFADGSSFICLQCG 104
Query: 212 GLVSGHRKDEHIAYWCSH 265 GLVS HR+DEH AYWCS+ Sbjct: 105 GLVSIHRRDEHYAYWCSN 122
>tr|Q1ECG7|Q1ECG7_ARATH At5g47830 OS=Arabidopsis thaliana PE=2 SV=1 Length = 173
Score = 81.6 bits (200), Expect = 3e-14 Identities = 42/78 (53%), Positives = 53/78 (67%) Frame = +2
Query: 32 SQATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCG 211 ++A +LD P+ S L T ++ IL +SGR Q++LDA ADGSSFICLQCG Sbjct: 96 TEAQPLALDEPTTSKDLFGTKQ-TVTADAHGISILEKSGRSQIMLDAFADGSSFICLQCG 154
Query: 212 GLVSGHRKDEHIAYWCSH 265 GLVS HR+DEH AYWCS+ Sbjct: 155 GLVSIHRRDEHYAYWCSN 172
>tr|A9NYK9|A9NYK9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 169
Score = 81.6 bits (200), Expect = 3e-14 Identities = 40/60 (66%), Positives = 47/60 (78%) Frame = +2
Query: 80 LEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEHIAYWC 259 L + MLT +S ILA+SGRMQVV+DA ADGSSF+CLQCGGLVS R+DEH+AYWC Sbjct: 109 LAGSSMLTDTSK---TSILAKSGRMQVVMDAFADGSSFVCLQCGGLVSNLRRDEHLAYWC 165
>tr|A9SW11|A9SW11_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_18870 PE=4 SV=1 Length = 147
Score = 80.9 bits (198), Expect = 4e-14 Identities = 43/87 (49%), Positives = 59/87 (67%) Frame = +2
Query: 2 ADAAVPTDLSSQATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASAD 181 A A+ T L T ++ + ++ L++ ML+S ++ ILAESGR QVV DASAD Sbjct: 63 AQCAIAT-LPPNRTSDAPEPMAVETTLQERIMLSSFDVVRSS-ILAESGREQVVYDASAD 120
Query: 182 GSSFICLQCGGLVSGHRKDEHIAYWCS 262 GSSF+C QCGG+VS R+DEH++YWCS Sbjct: 121 GSSFLCQQCGGVVSNSRRDEHLSYWCS 147
>tr|B6U5J3|B6U5J3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 172
Score = 80.1 bits (196), Expect = 7e-14 Identities = 40/66 (60%), Positives = 47/66 (71%) Frame = +2
Query: 62 PSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDE 241 P G + +ML S + A ILAESGR Q++LDA ADGSSFICL+CGGL S RKDE Sbjct: 108 PPQGPGSDPVNMLNS----DEACILAESGRKQIILDAFADGSSFICLKCGGLFSTSRKDE 163
Query: 242 HIAYWC 259 H+AYWC Sbjct: 164 HLAYWC 169
>tr|A9S6B0|A9S6B0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181664 PE=4 SV=1 Length = 173
Score = 77.8 bits (190), Expect = 4e-13 Identities = 39/66 (59%), Positives = 45/66 (68%) Frame = +2
Query: 65 SLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEH 244 S+ GL Q +S G ILAE+GR QVV DAS DGSSF+C QCGG+VS R+DEH Sbjct: 104 SVETGL-QGGTTDNSHNGVRTSILAETGREQVVYDASVDGSSFLCQQCGGVVSNGRRDEH 162
Query: 245 IAYWCS 262 AYWCS Sbjct: 163 FAYWCS 168
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