BP912405
Clone id YMU001_000018_F08
Library
Length 557
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000018_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGCGGATGCTGCTGTTCCAACGGATTTGTCATCCCAGGCAACGGACGAATCATTGGATGT
GCCATCTCTCTCTCTGGGTTTGGAGCAGGCTCACATGTTAACAAGCTCTTCTACTGGTGA
AGCAGCTCCAATCTTGGCAGAGAGTGGCAGGATGCAAGTTGTTCTGGATGCATCTGCAGA
TGGCAGTAGCTTCATCTGTTTGCAATGTGGTGGGCTTGTCAGCGGCCATCGCAAAGATGA
GCATATTGCGTATTGGTGTTCTCACTCTCGACAAGTGGTGTGAAGAGTTCTAGATTGTAT
GAAAGCCCAGTAGTAAAGTGGCTTATAGGATGGTGGGGGAGGCCAGCATGGATATTTGGT
TAGGTGCTCAAAACATGATGCCTATGCTGAGTCTGTCATCAAAAACCACGAGGCATTTGG
AGTGTGTGGTTTGTTGTAAGCACTAGTGTTTGTCACACGGATTGTTTTGAGACGTCCGTC
AGAGCCGTCTGCTTTGGTGTAACAAGGGCATTTGGCCCTTACTCAGGCTTTTCAAAATAA
TGCCATACAGAGTGTCC
■■Homology search results ■■ -
sp_hit_id P97360
Definition sp|P97360|ETV6_MOUSE Transcription factor ETV6 OS=Mus musculus
Align length 43
Score (bit) 34.7
E-value 0.32
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912405|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_F08.
(557 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P97360|ETV6_MOUSE Transcription factor ETV6 OS=Mus musculus G... 35 0.32
sp|A3KNI7|CCDB1_DANRE Cyclin-D1-binding protein 1 homolog OS=Dan... 32 2.1
sp|Q9NRA0|SPHK2_HUMAN Sphingosine kinase 2 OS=Homo sapiens GN=SP... 30 6.1
sp|Q3SHE5|PSD_THIDA Phosphatidylserine decarboxylase proenzyme O... 30 6.1
sp|P41212|ETV6_HUMAN Transcription factor ETV6 OS=Homo sapiens G... 30 6.1
sp|A4X7Y6|CAAL_SALTO Carboxylate-amine ligase Strop_2542 OS=Sali... 30 6.1
sp|A8M5J6|CAAL_SALAI Carboxylate-amine ligase Sare_2729 OS=Salin... 30 8.0

>sp|P97360|ETV6_MOUSE Transcription factor ETV6 OS=Mus musculus
GN=Etv6 PE=1 SV=1
Length = 485

Score = 34.7 bits (78), Expect = 0.32
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1

Query: 146 HSLPRLELLHQ*KSLLTCEPAPNPEREMAHPMIRPLPGMTNPL 18
H+ P +ELLH+ +S +T P+P+ E P PL M+ L
Sbjct: 172 HNPPTIELLHRPRSPITTNHRPSPDPEQQRPQRSPLDNMSRRL 214


>sp|A3KNI7|CCDB1_DANRE Cyclin-D1-binding protein 1 homolog OS=Danio
rerio GN=ccndbp1 PE=2 SV=2
Length = 344

Score = 32.0 bits (71), Expect = 2.1
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -3

Query: 180 SADASRTTCILPLSAKIGAASPVEELVNM*ACSKPRERDGTSNDSS 43
SA+ SR+ +LPL L N CS+ R RDG SNDSS
Sbjct: 2 SAENSRSEALLPL----------RNLWNSVKCSRDRVRDGESNDSS 37


>sp|Q9NRA0|SPHK2_HUMAN Sphingosine kinase 2 OS=Homo sapiens GN=SPHK2
PE=1 SV=2
Length = 654

Score = 30.4 bits (67), Expect = 6.1
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -1

Query: 212 HHIANR*SYCHLQMHPEQLASCHSLPRLELLHQ*KSLLTCEPAPNPEREMAH-PMIRPLP 36
H R SY + P HSLPR KS LT P P P MAH P+ R +
Sbjct: 370 HTYRGRLSYLPATVEPASPTPAHSLPRA------KSELTLTPDPAP--PMAHSPLHRSVS 421

Query: 35 GMTNPLEQ 12
+ PL Q
Sbjct: 422 DLPLPLPQ 429


>sp|Q3SHE5|PSD_THIDA Phosphatidylserine decarboxylase proenzyme
OS=Thiobacillus denitrificans (strain ATCC 25259) GN=psd
PE=3 SV=1
Length = 208

Score = 30.4 bits (67), Expect = 6.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1

Query: 310 VVKWLIGWWGRPAWIF 357
+ WLIGWW P WI+
Sbjct: 23 IATWLIGWWSVPFWIW 38


>sp|P41212|ETV6_HUMAN Transcription factor ETV6 OS=Homo sapiens
GN=ETV6 PE=1 SV=1
Length = 452

Score = 30.4 bits (67), Expect = 6.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1

Query: 146 HSLPRLELLHQ*KSLLTCEPAPNPEREMAHPMIRPLPGMTNPL 18
H+ P +ELLH+ +S +T P+P+ E P+ PL M L
Sbjct: 171 HNPPTIELLHRSRSPITTNHRPSPDPEQ-RPLRSPLDNMIRRL 212


>sp|A4X7Y6|CAAL_SALTO Carboxylate-amine ligase Strop_2542
OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818
/ CNB-440) GN=Strop_2542 PE=3 SV=1
Length = 378

Score = 30.4 bits (67), Expect = 6.1
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2

Query: 38 ATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILA 139
ATD D+ +L+LG+E+ +L S TGE+ P+ A
Sbjct: 6 ATDPP-DLDTLTLGVEEEFLLLDSDTGESMPVAA 38


>sp|A8M5J6|CAAL_SALAI Carboxylate-amine ligase Sare_2729
OS=Salinispora arenicola (strain CNS-205) GN=Sare_2729
PE=3 SV=1
Length = 378

Score = 30.0 bits (66), Expect = 8.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2

Query: 56 DVPSLSLGLEQAHMLTSSSTGEAAPILA 139
D+ SL+LG+E+ +L + TGE+ P+ A
Sbjct: 11 DLASLTLGVEEEFLLLDAETGESMPVAA 38


tr_hit_id A9NN14
Definition tr|A9NN14|A9NN14_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 49
Score (bit) 86.3
E-value 1.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912405|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_F08.
(557 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NN14|A9NN14_PICSI Putative uncharacterized protein OS=Picea... 86 1e-15
tr|A9NSL4|A9NSL4_PICSI Putative uncharacterized protein OS=Picea... 84 4e-15
tr|A7NU06|A7NU06_VITVI Chromosome chr18 scaffold_1, whole genome... 82 2e-14
tr|Q9FIJ8|Q9FIJ8_ARATH Arabidopsis thaliana genomic DNA, chromos... 82 3e-14
tr|Q3E8E9|Q3E8E9_ARATH Uncharacterized protein At5g47830.2 OS=Ar... 82 3e-14
tr|Q1ECG7|Q1ECG7_ARATH At5g47830 OS=Arabidopsis thaliana PE=2 SV=1 82 3e-14
tr|A9NYK9|A9NYK9_PICSI Putative uncharacterized protein OS=Picea... 82 3e-14
tr|A9SW11|A9SW11_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 4e-14
tr|B6U5J3|B6U5J3_MAIZE Putative uncharacterized protein OS=Zea m... 80 7e-14
tr|A9S6B0|A9S6B0_PHYPA Predicted protein OS=Physcomitrella paten... 78 4e-13
tr|Q6ET41|Q6ET41_ORYSJ Os02g0158600 protein OS=Oryza sativa subs... 77 5e-13
tr|A2X145|A2X145_ORYSI Putative uncharacterized protein OS=Oryza... 77 5e-13
tr|Q2HTP5|Q2HTP5_MEDTR Putative uncharacterized protein OS=Medic... 76 1e-12
tr|A3A3C3|A3A3C3_ORYSJ Putative uncharacterized protein OS=Oryza... 48 3e-04
tr|B8BQ34|B8BQ34_THAPS Predicted protein OS=Thalassiosira pseudo... 44 0.008
tr|A9V135|A9V135_MONBE Predicted protein OS=Monosiga brevicollis... 35 2.1
tr|Q8C5E8|Q8C5E8_MOUSE Putative uncharacterized protein OS=Mus m... 35 3.6
tr|Q80WR3|Q80WR3_MOUSE Etv6 protein OS=Mus musculus GN=Etv6 PE=2... 35 3.6
tr|Q3U037|Q3U037_MOUSE Putative uncharacterized protein OS=Mus m... 35 3.6
tr|Q3KRD1|Q3KRD1_RAT Ets variant gene 6 (TEL oncogene) OS=Rattus... 35 3.6
tr|A0LVL3|A0LVL3_ACIC1 Glycoside hydrolase, family 9 OS=Acidothe... 33 7.9
tr|B4LUW4|B4LUW4_DROVI GJ17388 OS=Drosophila virilis GN=GJ17388 ... 33 7.9

>tr|A9NN14|A9NN14_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 173

Score = 86.3 bits (212), Expect = 1e-15
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +2

Query: 125 APILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEHIAYWCSHSR 271
A ILAE+GRMQVV+DA ADGSSFICL+CGGLVS RKDEHIAYWCS +R
Sbjct: 124 ASILAENGRMQVVMDAFADGSSFICLRCGGLVSNTRKDEHIAYWCSDAR 172


>tr|A9NSL4|A9NSL4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 173

Score = 84.3 bits (207), Expect = 4e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +2

Query: 125 APILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEHIAYWCS 262
A ILAE+GRMQVV+DA ADGSSFICL+CGGLVS RKDEHIAYWCS
Sbjct: 124 ASILAENGRMQVVMDAFADGSSFICLRCGGLVSNTRKDEHIAYWCS 169


>tr|A7NU06|A7NU06_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00014869001
PE=4 SV=1
Length = 167

Score = 82.0 bits (201), Expect = 2e-14
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +2

Query: 131 ILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEHIAYWC 259
ILAE+GR Q+VLDA +DGSSFICLQCGGLVS HRKDEH AYWC
Sbjct: 122 ILAETGRRQIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWC 164


>tr|Q9FIJ8|Q9FIJ8_ARATH Arabidopsis thaliana genomic DNA, chromosome
5, P1 clone:MCA23 OS=Arabidopsis thaliana PE=4 SV=1
Length = 202

Score = 81.6 bits (200), Expect = 3e-14
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +2

Query: 32 SQATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCG 211
++A +LD P+ S L T ++ IL +SGR Q++LDA ADGSSFICLQCG
Sbjct: 125 TEAQPLALDEPTTSKDLFGTKQ-TVTADAHGISILEKSGRSQIMLDAFADGSSFICLQCG 183

Query: 212 GLVSGHRKDEHIAYWCSH 265
GLVS HR+DEH AYWCS+
Sbjct: 184 GLVSIHRRDEHYAYWCSN 201


>tr|Q3E8E9|Q3E8E9_ARATH Uncharacterized protein At5g47830.2
OS=Arabidopsis thaliana GN=At5g47830 PE=4 SV=1
Length = 123

Score = 81.6 bits (200), Expect = 3e-14
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +2

Query: 32 SQATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCG 211
++A +LD P+ S L T ++ IL +SGR Q++LDA ADGSSFICLQCG
Sbjct: 46 TEAQPLALDEPTTSKDLFGTKQ-TVTADAHGISILEKSGRSQIMLDAFADGSSFICLQCG 104

Query: 212 GLVSGHRKDEHIAYWCSH 265
GLVS HR+DEH AYWCS+
Sbjct: 105 GLVSIHRRDEHYAYWCSN 122


>tr|Q1ECG7|Q1ECG7_ARATH At5g47830 OS=Arabidopsis thaliana PE=2 SV=1
Length = 173

Score = 81.6 bits (200), Expect = 3e-14
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +2

Query: 32 SQATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCG 211
++A +LD P+ S L T ++ IL +SGR Q++LDA ADGSSFICLQCG
Sbjct: 96 TEAQPLALDEPTTSKDLFGTKQ-TVTADAHGISILEKSGRSQIMLDAFADGSSFICLQCG 154

Query: 212 GLVSGHRKDEHIAYWCSH 265
GLVS HR+DEH AYWCS+
Sbjct: 155 GLVSIHRRDEHYAYWCSN 172


>tr|A9NYK9|A9NYK9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 169

Score = 81.6 bits (200), Expect = 3e-14
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = +2

Query: 80 LEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEHIAYWC 259
L + MLT +S ILA+SGRMQVV+DA ADGSSF+CLQCGGLVS R+DEH+AYWC
Sbjct: 109 LAGSSMLTDTSK---TSILAKSGRMQVVMDAFADGSSFVCLQCGGLVSNLRRDEHLAYWC 165


>tr|A9SW11|A9SW11_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_18870 PE=4 SV=1
Length = 147

Score = 80.9 bits (198), Expect = 4e-14
Identities = 43/87 (49%), Positives = 59/87 (67%)
Frame = +2

Query: 2 ADAAVPTDLSSQATDESLDVPSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASAD 181
A A+ T L T ++ + ++ L++ ML+S ++ ILAESGR QVV DASAD
Sbjct: 63 AQCAIAT-LPPNRTSDAPEPMAVETTLQERIMLSSFDVVRSS-ILAESGREQVVYDASAD 120

Query: 182 GSSFICLQCGGLVSGHRKDEHIAYWCS 262
GSSF+C QCGG+VS R+DEH++YWCS
Sbjct: 121 GSSFLCQQCGGVVSNSRRDEHLSYWCS 147


>tr|B6U5J3|B6U5J3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 172

Score = 80.1 bits (196), Expect = 7e-14
Identities = 40/66 (60%), Positives = 47/66 (71%)
Frame = +2

Query: 62 PSLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDE 241
P G + +ML S + A ILAESGR Q++LDA ADGSSFICL+CGGL S RKDE
Sbjct: 108 PPQGPGSDPVNMLNS----DEACILAESGRKQIILDAFADGSSFICLKCGGLFSTSRKDE 163

Query: 242 HIAYWC 259
H+AYWC
Sbjct: 164 HLAYWC 169


>tr|A9S6B0|A9S6B0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_181664 PE=4 SV=1
Length = 173

Score = 77.8 bits (190), Expect = 4e-13
Identities = 39/66 (59%), Positives = 45/66 (68%)
Frame = +2

Query: 65 SLSLGLEQAHMLTSSSTGEAAPILAESGRMQVVLDASADGSSFICLQCGGLVSGHRKDEH 244
S+ GL Q +S G ILAE+GR QVV DAS DGSSF+C QCGG+VS R+DEH
Sbjct: 104 SVETGL-QGGTTDNSHNGVRTSILAETGREQVVYDASVDGSSFLCQQCGGVVSNGRRDEH 162

Query: 245 IAYWCS 262
AYWCS
Sbjct: 163 FAYWCS 168