BP912409 |
Clone id |
YMU001_000018_F12 |
Library |
YMU01 |
Length |
542 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000018_F12. |
Accession |
BP912409 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTTGTGACCAAAAACAGAAGGCCTCCATAAACAGCAATCACTATAACAGTGTGTGAT ATTACAACAAAAGGGTTCCAGGAGGATCCAGGCTCTCCCCTAAATTTTGCAAAGATCAGG CTATCCTTTCCAAATACAAAAACCTCCTTGACATGTAGCTTTGGCATTCTTTTTACATAT AGCTCAGCAATACTTTCACAATAATCCTTCCAAGATTCCTTTCTTCGCTGTCCTTACAAG GTACCTTCTTCTTCATTGTCCCTCTACGATCCTAATGCAACCTTTCCAGCTACTCTTCCA TATCTAATGGAACTTCGAGTAAATTCCAGATGTCTTCTTCAATGTGTGGAGTTTTAATGC CAGTAAACTGAATTGCATCATCCATCATGACATCAGCTCCATTCTGCCCCCGATTGAGAC TATGATGAAGCTCTCTCTTGATTTCTGGAGTCATCAAGTAGTGCTTATGTTGCCGCATCA GCTTTTCCAAGTTGTCCCTGTCCTCATGTTTCAGCTCATTCTTATACCTCTGAACGAAAG AT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54IS0 |
Definition |
sp|Q54IS0|BYST_DICDI Bystin OS=Dictyostelium discoideum |
Align length |
55 |
Score (bit) |
50.4 |
E-value |
5.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S622 |
Definition |
tr|A9S622|A9S622_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
79 |
Score (bit) |
78.2 |
E-value |
3.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912409|Adiantum capillus-veneris mRNA, clone: YMU001_000018_F12. (542 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S622|A9S622_PHYPA Predicted protein OS=Physcomitrella paten... 78 3e-13 tr|Q6EQN5|Q6EQN5_ORYSJ Os09g0352400 protein OS=Oryza sativa subs... 75 3e-12 tr|Q6EQN4|Q6EQN4_ORYSJ Bystin (51.6 kD)-like OS=Oryza sativa sub... 75 3e-12 tr|B8BER5|B8BER5_ORYSI Putative uncharacterized protein OS=Oryza... 75 3e-12 tr|A9SVY1|A9SVY1_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11 tr|B4G093|B4G093_MAIZE Putative uncharacterized protein OS=Zea m... 71 4e-11 tr|A9PBD7|A9PBD7_POPTR Putative uncharacterized protein OS=Popul... 69 1e-10 tr|A7PU30|A7PU30_VITVI Chromosome chr7 scaffold_31, whole genome... 65 3e-09 tr|A7QN53|A7QN53_VITVI Chromosome undetermined scaffold_130, who... 64 7e-09 tr|A3BXW4|A3BXW4_ORYSJ Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|Q8RWS4|Q8RWS4_ARATH Putative bystin OS=Arabidopsis thaliana G... 60 7e-08 tr|Q9C6V6|Q9C6V6_ARATH Bystin, putative OS=Arabidopsis thaliana ... 58 3e-07 tr|A4S578|A4S578_OSTLU Predicted protein OS=Ostreococcus lucimar... 51 3e-05 tr|Q00YE5|Q00YE5_OSTTA Bystin-like (ISS) OS=Ostreococcus tauri G... 50 6e-05 tr|B7G2B7|B7G2B7_PHATR Predicted protein (Fragment) OS=Phaeodact... 50 1e-04 tr|Q4CU43|Q4CU43_TRYCR Bystin, putative OS=Trypanosoma cruzi GN=... 50 1e-04 tr|Q0C738|Q0C738_AEDAE Bystin OS=Aedes aegypti GN=AAEL000001 PE=... 48 4e-04 tr|A8JCT4|A8JCT4_CHLRE Bystin-like protein (Fragment) OS=Chlamyd... 45 0.002 tr|Q5CSR0|Q5CSR0_CRYPV Bystin/ S.cerevisiae En1p like adaptor do... 45 0.002 tr|B6AGX6|B6AGX6_9CRYT Bystin family protein OS=Cryptosporidium ... 45 0.002 tr|B4R681|B4R681_DROSI GD16865 OS=Drosophila simulans GN=GD16865... 45 0.002 tr|B4Q0Q8|B4Q0Q8_DROYA GE15743 OS=Drosophila yakuba GN=GE15743 P... 45 0.002 tr|B4IL49|B4IL49_DROSE GM11980 OS=Drosophila sechellia GN=GM1198... 45 0.002 tr|B3NTU6|B3NTU6_DROER GG19667 OS=Drosophila erecta GN=GG19667 P... 45 0.002 tr|B3MR00|B3MR00_DROAN GF21188 OS=Drosophila ananassae GN=GF2118... 45 0.002 tr|Q7QD29|Q7QD29_ANOGA AGAP002923-PA (Fragment) OS=Anopheles gam... 45 0.003 tr|A8XP55|A8XP55_CAEBR CBR-BYN-1 protein OS=Caenorhabditis brigg... 44 0.004 tr|B7Q8R6|B7Q8R6_IXOSC Cell adhesion complex protein bystin, put... 44 0.005 tr|B8BSS5|B8BSS5_THAPS Predicted protein (Fragment) OS=Thalassio... 44 0.007 tr|Q754W1|Q754W1_ASHGO AFL044Wp OS=Ashbya gossypii GN=AFL044W PE... 43 0.009
>tr|A9S622|A9S622_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_75053 PE=4 SV=1 Length = 353
Score = 78.2 bits (191), Expect = 3e-13 Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 2/79 (2%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362 +FVQRYKNEL ED++ L++LMR+ KHYL+TPEI REL +S NRGQ DD + Sbjct: 274 TFVQRYKNELSEEDKEKLKQLMRKQKHYLVTPEIHRELLNSRNRGQK------DDHMTTV 327
Query: 361 GIKTPH--IEEDIWNLLEV 311 +K +EED+WNL EV Sbjct: 328 PMKIEKAVVEEDMWNLPEV 346
>tr|Q6EQN5|Q6EQN5_ORYSJ Os09g0352400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0042H24.8-1 PE=4 SV=1 Length = 460
Score = 74.7 bits (182), Expect = 3e-12 Identities = 39/78 (50%), Positives = 53/78 (67%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362 +FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ D +M + Sbjct: 383 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEK--DTIMSICSPVS 440
Query: 361 GIKTPHIEEDIWNLLEVP 308 I P IEED WN+ EVP Sbjct: 441 VITKP-IEEDRWNVPEVP 457
>tr|Q6EQN4|Q6EQN4_ORYSJ Bystin (51.6 kD)-like OS=Oryza sativa subsp. japonica GN=OSJNBa0042H24.8-2 PE=4 SV=1 Length = 320
Score = 74.7 bits (182), Expect = 3e-12 Identities = 39/78 (50%), Positives = 53/78 (67%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362 +FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ D +M + Sbjct: 243 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEK--DTIMSICSPVS 300
Query: 361 GIKTPHIEEDIWNLLEVP 308 I P IEED WN+ EVP Sbjct: 301 VITKP-IEEDRWNVPEVP 317
>tr|B8BER5|B8BER5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31018 PE=4 SV=1 Length = 460
Score = 74.7 bits (182), Expect = 3e-12 Identities = 39/78 (50%), Positives = 53/78 (67%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362 +FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ D +M + Sbjct: 383 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEK--DTIMSICSPVS 440
Query: 361 GIKTPHIEEDIWNLLEVP 308 I P IEED WN+ EVP Sbjct: 441 VITKP-IEEDRWNVPEVP 457
>tr|A9SVY1|A9SVY1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_136122 PE=4 SV=1 Length = 344
Score = 72.4 bits (176), Expect = 1e-11 Identities = 38/77 (49%), Positives = 53/77 (68%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362 +FVQRYKNEL ED++ L++L R+ KHY +TPEI REL +S NRGQ +V +I Sbjct: 265 TFVQRYKNELSEEDKERLKQLTRRQKHYQVTPEIHRELLNSRNRGQKDHNV----SIFPM 320
Query: 361 GIKTPHIEEDIWNLLEV 311 ++ ++ED+WNL EV Sbjct: 321 KVEKAVLKEDMWNLPEV 337
>tr|B4G093|B4G093_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 461
Score = 70.9 bits (172), Expect = 4e-11 Identities = 34/78 (43%), Positives = 52/78 (66%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362 +FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ ++ + Sbjct: 383 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRGSCNRGEKDTNL---HTLSPI 439
Query: 361 GIKTPHIEEDIWNLLEVP 308 + T IEED W++ +VP Sbjct: 440 SVITKPIEEDKWDVPQVP 457
>tr|A9PBD7|A9PBD7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 443
Score = 69.3 bits (168), Expect = 1e-10 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 3/81 (3%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362 SFVQRYKNEL+ ED+DNL +L+ + KH L++PEI REL +S NRG+ DD + T Sbjct: 365 SFVQRYKNELQKEDKDNLRRLVLRQKHKLVSPEIIRELDNSRNRGEK------DDPMSIT 418
Query: 361 ---GIKTPHIEEDIWNLLEVP 308 + IEED +++ EVP Sbjct: 419 SPVSVINKTIEEDRFDIPEVP 439
>tr|A7PU30|A7PU30_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023635001 PE=4 SV=1 Length = 417
Score = 64.7 bits (156), Expect = 3e-09 Identities = 28/53 (52%), Positives = 42/53 (79%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMM 383 +FVQRYKN+L+ ED+D+L+ L+ +H L+TPEI REL++S NRG+ D+M+ Sbjct: 361 TFVQRYKNQLRKEDKDSLKTLIENQRHKLVTPEISRELNNSRNRGEKEDDLML 413
>tr|A7QN53|A7QN53_VITVI Chromosome undetermined scaffold_130, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002368001 PE=4 SV=1 Length = 417
Score = 63.5 bits (153), Expect = 7e-09 Identities = 27/53 (50%), Positives = 42/53 (79%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMM 383 +FVQRYKN+L+ ED+D+L+ L+ +H L+TP+I REL++S NRG+ D+M+ Sbjct: 361 TFVQRYKNQLRKEDKDSLKTLIENQRHRLVTPDISRELNNSRNRGEEEDDLML 413
>tr|A3BXW4|A3BXW4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027886 PE=4 SV=1 Length = 501
Score = 61.6 bits (148), Expect = 3e-08 Identities = 31/75 (41%), Positives = 47/75 (62%) Frame = -2
Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362 +FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ D I Sbjct: 432 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEK-------DTIMSI 484
Query: 361 GIKTPHIEEDIWNLL 317 I T H + ++ ++ Sbjct: 485 YILTVHADSYLFCII 499
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