BP912409
Clone id YMU001_000018_F12
Library
Length 542
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000018_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTGTGACCAAAAACAGAAGGCCTCCATAAACAGCAATCACTATAACAGTGTGTGAT
ATTACAACAAAAGGGTTCCAGGAGGATCCAGGCTCTCCCCTAAATTTTGCAAAGATCAGG
CTATCCTTTCCAAATACAAAAACCTCCTTGACATGTAGCTTTGGCATTCTTTTTACATAT
AGCTCAGCAATACTTTCACAATAATCCTTCCAAGATTCCTTTCTTCGCTGTCCTTACAAG
GTACCTTCTTCTTCATTGTCCCTCTACGATCCTAATGCAACCTTTCCAGCTACTCTTCCA
TATCTAATGGAACTTCGAGTAAATTCCAGATGTCTTCTTCAATGTGTGGAGTTTTAATGC
CAGTAAACTGAATTGCATCATCCATCATGACATCAGCTCCATTCTGCCCCCGATTGAGAC
TATGATGAAGCTCTCTCTTGATTTCTGGAGTCATCAAGTAGTGCTTATGTTGCCGCATCA
GCTTTTCCAAGTTGTCCCTGTCCTCATGTTTCAGCTCATTCTTATACCTCTGAACGAAAG
AT
■■Homology search results ■■ -
sp_hit_id Q54IS0
Definition sp|Q54IS0|BYST_DICDI Bystin OS=Dictyostelium discoideum
Align length 55
Score (bit) 50.4
E-value 5.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912409|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_F12.
(542 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54IS0|BYST_DICDI Bystin OS=Dictyostelium discoideum GN=bysl ... 50 5e-06
sp|A7S7F2|BYST_NEMVE Bystin OS=Nematostella vectensis GN=bysl PE... 47 5e-05
sp|A9UNU6|BYST_MONBE Bystin OS=Monosiga brevicollis GN=bysl PE=3... 47 6e-05
sp|P51406|BYS_DROME Bystin OS=Drosophila melanogaster GN=bys PE=... 45 2e-04
sp|Q20932|BYN1_CAEEL Cell adhesion protein byn-1 OS=Caenorhabdit... 44 5e-04
sp|O60071|YBB9_SCHPO Uncharacterized protein C13G1.09 OS=Schizos... 43 9e-04
sp|Q5E9N0|BYST_BOVIN Bystin OS=Bos taurus GN=BYSL PE=2 SV=1 40 0.007
sp|P38333|ENP1_YEAST Essential nuclear protein 1 OS=Saccharomyce... 40 0.010
sp|O54825|BYST_MOUSE Bystin OS=Mus musculus GN=Bysl PE=1 SV=3 39 0.021
sp|Q80WL2|BYST_RAT Bystin OS=Rattus norvegicus GN=Bysl PE=2 SV=3 38 0.036
sp|Q13895|BYST_HUMAN Bystin OS=Homo sapiens GN=BYSL PE=1 SV=3 37 0.062
sp|Q873N2|GWT1_CANAL GPI-anchored wall transfer protein 1 OS=Can... 37 0.081
sp|O30250|SYL_ARCFU Leucyl-tRNA synthetase OS=Archaeoglobus fulg... 32 1.5
sp|Q9D162|CF129_MOUSE Transmembrane and coiled-coil domain-conta... 31 3.4
sp|P57574|RS5_BUCAI 30S ribosomal protein S5 OS=Buchnera aphidic... 30 5.8
sp|Q6P116|RCOR2_DANRE REST corepressor 2 OS=Danio rerio GN=rcor2... 30 7.6
sp|O13967|BGS2_SCHPO 1,3-beta-glucan synthase component bgs2 OS=... 30 7.6
sp|P60258|SCXD_BUTOM Toxin Boma6d OS=Buthus occitanus mardochei ... 30 9.9
sp|A5E7U6|RIX1_LODEL Pre-rRNA-processing protein RIX1 OS=Loddero... 30 9.9
sp|Q6A8C8|ATPE_PROAC ATP synthase epsilon chain OS=Propionibacte... 30 9.9

>sp|Q54IS0|BYST_DICDI Bystin OS=Dictyostelium discoideum GN=bysl
PE=3 SV=1
Length = 475

Score = 50.4 bits (119), Expect = 5e-06
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDD 377
SFVQRYK ++ + ++ L+ ++R+H H+++T EI+REL S +RG DD
Sbjct: 415 SFVQRYKTDITKDQKEKLKIILRKHNHHIITAEIRRELFFSNSRGGVAPSNFTDD 469


>sp|A7S7F2|BYST_NEMVE Bystin OS=Nematostella vectensis GN=bysl PE=3
SV=1
Length = 430

Score = 47.4 bits (111), Expect = 5e-05
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNR 410
+FVQRYK ++ E ++ L +L R H H +TPE++REL HS +R
Sbjct: 376 TFVQRYKEDISSEQKEALMELCRVHVHDKITPEVRRELVHSKSR 419


>sp|A9UNU6|BYST_MONBE Bystin OS=Monosiga brevicollis GN=bysl PE=3
SV=1
Length = 414

Score = 47.0 bits (110), Expect = 6e-05
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -2

Query: 538 FVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNR 410
FVQRYK ++ E + L ++R H HY +TPEI+REL S +R
Sbjct: 361 FVQRYKEDITSEQKRALLDVLRSHNHYAITPEIRRELVQSKSR 403


>sp|P51406|BYS_DROME Bystin OS=Drosophila melanogaster GN=bys PE=1
SV=2
Length = 436

Score = 45.1 bits (105), Expect = 2e-04
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKREL 428
+F QRYKN++ E RD L +L+++ H+ +TP+++REL
Sbjct: 365 TFAQRYKNDISSEQRDALLQLLKKKSHFKITPDVRREL 402


>sp|Q20932|BYN1_CAEEL Cell adhesion protein byn-1 OS=Caenorhabditis
elegans GN=byn-1 PE=2 SV=2
Length = 449

Score = 43.9 bits (102), Expect = 5e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = -2

Query: 532 QRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKREL 428
QRYKN+L E + + +L+R H HYL++PEI+REL
Sbjct: 389 QRYKNDLNAEQKAAIYELIRFHGHYLISPEIRREL 423


>sp|O60071|YBB9_SCHPO Uncharacterized protein C13G1.09
OS=Schizosaccharomyces pombe GN=SPBC13G1.09 PE=1 SV=1
Length = 449

Score = 43.1 bits (100), Expect = 9e-04
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = -2

Query: 538 FVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQ 404
F QRYK ++ E +D L +++R HY + PEI+REL +S +RG+
Sbjct: 397 FAQRYKFDITPEQKDALLEVVRLKGHYSIGPEIRRELLNSASRGE 441


>sp|Q5E9N0|BYST_BOVIN Bystin OS=Bos taurus GN=BYSL PE=2 SV=1
Length = 435

Score = 40.0 bits (92), Expect = 0.007
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMD 380
+ VQRYK +L E ++ L +L+R H ++PEI+REL ++ R V M+
Sbjct: 382 TLVQRYKADLATEQKEALLELLRLQPHPQLSPEIRRELQSAVPRDVEDVPVTME 435


>sp|P38333|ENP1_YEAST Essential nuclear protein 1 OS=Saccharomyces
cerevisiae GN=ENP1 PE=1 SV=1
Length = 483

Score = 39.7 bits (91), Expect = 0.010
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKREL 428
+F QRYKN++ + RD L + +RQ H + PEI+REL
Sbjct: 423 TFAQRYKNDITQDQRDFLLETVRQRGHKDIGPEIRREL 460


>sp|O54825|BYST_MOUSE Bystin OS=Mus musculus GN=Bysl PE=1 SV=3
Length = 436

Score = 38.5 bits (88), Expect = 0.021
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMD 380
+ QRYK +L E ++ L +L+R H ++PEI+REL ++ R V M+
Sbjct: 383 TLAQRYKADLATEQKEALLELLRLQPHPQLSPEIRRELQSAVPRDVEDGGVTME 436


>sp|Q80WL2|BYST_RAT Bystin OS=Rattus norvegicus GN=Bysl PE=2 SV=3
Length = 436

Score = 37.7 bits (86), Expect = 0.036
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMD 380
+ QRYK +L E ++ L +L+R H ++PEI+REL ++ R V M+
Sbjct: 383 TLAQRYKADLATEQKEALLELLRLQPHPQLSPEIRRELQSAVPRDVEDVVVTME 436


tr_hit_id A9S622
Definition tr|A9S622|A9S622_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 79
Score (bit) 78.2
E-value 3.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912409|Adiantum capillus-veneris mRNA, clone:
YMU001_000018_F12.
(542 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S622|A9S622_PHYPA Predicted protein OS=Physcomitrella paten... 78 3e-13
tr|Q6EQN5|Q6EQN5_ORYSJ Os09g0352400 protein OS=Oryza sativa subs... 75 3e-12
tr|Q6EQN4|Q6EQN4_ORYSJ Bystin (51.6 kD)-like OS=Oryza sativa sub... 75 3e-12
tr|B8BER5|B8BER5_ORYSI Putative uncharacterized protein OS=Oryza... 75 3e-12
tr|A9SVY1|A9SVY1_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11
tr|B4G093|B4G093_MAIZE Putative uncharacterized protein OS=Zea m... 71 4e-11
tr|A9PBD7|A9PBD7_POPTR Putative uncharacterized protein OS=Popul... 69 1e-10
tr|A7PU30|A7PU30_VITVI Chromosome chr7 scaffold_31, whole genome... 65 3e-09
tr|A7QN53|A7QN53_VITVI Chromosome undetermined scaffold_130, who... 64 7e-09
tr|A3BXW4|A3BXW4_ORYSJ Putative uncharacterized protein OS=Oryza... 62 3e-08
tr|Q8RWS4|Q8RWS4_ARATH Putative bystin OS=Arabidopsis thaliana G... 60 7e-08
tr|Q9C6V6|Q9C6V6_ARATH Bystin, putative OS=Arabidopsis thaliana ... 58 3e-07
tr|A4S578|A4S578_OSTLU Predicted protein OS=Ostreococcus lucimar... 51 3e-05
tr|Q00YE5|Q00YE5_OSTTA Bystin-like (ISS) OS=Ostreococcus tauri G... 50 6e-05
tr|B7G2B7|B7G2B7_PHATR Predicted protein (Fragment) OS=Phaeodact... 50 1e-04
tr|Q4CU43|Q4CU43_TRYCR Bystin, putative OS=Trypanosoma cruzi GN=... 50 1e-04
tr|Q0C738|Q0C738_AEDAE Bystin OS=Aedes aegypti GN=AAEL000001 PE=... 48 4e-04
tr|A8JCT4|A8JCT4_CHLRE Bystin-like protein (Fragment) OS=Chlamyd... 45 0.002
tr|Q5CSR0|Q5CSR0_CRYPV Bystin/ S.cerevisiae En1p like adaptor do... 45 0.002
tr|B6AGX6|B6AGX6_9CRYT Bystin family protein OS=Cryptosporidium ... 45 0.002
tr|B4R681|B4R681_DROSI GD16865 OS=Drosophila simulans GN=GD16865... 45 0.002
tr|B4Q0Q8|B4Q0Q8_DROYA GE15743 OS=Drosophila yakuba GN=GE15743 P... 45 0.002
tr|B4IL49|B4IL49_DROSE GM11980 OS=Drosophila sechellia GN=GM1198... 45 0.002
tr|B3NTU6|B3NTU6_DROER GG19667 OS=Drosophila erecta GN=GG19667 P... 45 0.002
tr|B3MR00|B3MR00_DROAN GF21188 OS=Drosophila ananassae GN=GF2118... 45 0.002
tr|Q7QD29|Q7QD29_ANOGA AGAP002923-PA (Fragment) OS=Anopheles gam... 45 0.003
tr|A8XP55|A8XP55_CAEBR CBR-BYN-1 protein OS=Caenorhabditis brigg... 44 0.004
tr|B7Q8R6|B7Q8R6_IXOSC Cell adhesion complex protein bystin, put... 44 0.005
tr|B8BSS5|B8BSS5_THAPS Predicted protein (Fragment) OS=Thalassio... 44 0.007
tr|Q754W1|Q754W1_ASHGO AFL044Wp OS=Ashbya gossypii GN=AFL044W PE... 43 0.009

>tr|A9S622|A9S622_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_75053 PE=4 SV=1
Length = 353

Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362
+FVQRYKNEL ED++ L++LMR+ KHYL+TPEI REL +S NRGQ DD +
Sbjct: 274 TFVQRYKNELSEEDKEKLKQLMRKQKHYLVTPEIHRELLNSRNRGQK------DDHMTTV 327

Query: 361 GIKTPH--IEEDIWNLLEV 311
+K +EED+WNL EV
Sbjct: 328 PMKIEKAVVEEDMWNLPEV 346


>tr|Q6EQN5|Q6EQN5_ORYSJ Os09g0352400 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0042H24.8-1 PE=4 SV=1
Length = 460

Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362
+FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ D +M +
Sbjct: 383 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEK--DTIMSICSPVS 440

Query: 361 GIKTPHIEEDIWNLLEVP 308
I P IEED WN+ EVP
Sbjct: 441 VITKP-IEEDRWNVPEVP 457


>tr|Q6EQN4|Q6EQN4_ORYSJ Bystin (51.6 kD)-like OS=Oryza sativa subsp.
japonica GN=OSJNBa0042H24.8-2 PE=4 SV=1
Length = 320

Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362
+FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ D +M +
Sbjct: 243 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEK--DTIMSICSPVS 300

Query: 361 GIKTPHIEEDIWNLLEVP 308
I P IEED WN+ EVP
Sbjct: 301 VITKP-IEEDRWNVPEVP 317


>tr|B8BER5|B8BER5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31018 PE=4 SV=1
Length = 460

Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362
+FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ D +M +
Sbjct: 383 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEK--DTIMSICSPVS 440

Query: 361 GIKTPHIEEDIWNLLEVP 308
I P IEED WN+ EVP
Sbjct: 441 VITKP-IEEDRWNVPEVP 457


>tr|A9SVY1|A9SVY1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_136122 PE=4 SV=1
Length = 344

Score = 72.4 bits (176), Expect = 1e-11
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362
+FVQRYKNEL ED++ L++L R+ KHY +TPEI REL +S NRGQ +V +I
Sbjct: 265 TFVQRYKNELSEEDKERLKQLTRRQKHYQVTPEIHRELLNSRNRGQKDHNV----SIFPM 320

Query: 361 GIKTPHIEEDIWNLLEV 311
++ ++ED+WNL EV
Sbjct: 321 KVEKAVLKEDMWNLPEV 337


>tr|B4G093|B4G093_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 461

Score = 70.9 bits (172), Expect = 4e-11
Identities = 34/78 (43%), Positives = 52/78 (66%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362
+FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ ++ +
Sbjct: 383 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRGSCNRGEKDTNL---HTLSPI 439

Query: 361 GIKTPHIEEDIWNLLEVP 308
+ T IEED W++ +VP
Sbjct: 440 SVITKPIEEDKWDVPQVP 457


>tr|A9PBD7|A9PBD7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 443

Score = 69.3 bits (168), Expect = 1e-10
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362
SFVQRYKNEL+ ED+DNL +L+ + KH L++PEI REL +S NRG+ DD + T
Sbjct: 365 SFVQRYKNELQKEDKDNLRRLVLRQKHKLVSPEIIRELDNSRNRGEK------DDPMSIT 418

Query: 361 ---GIKTPHIEEDIWNLLEVP 308
+ IEED +++ EVP
Sbjct: 419 SPVSVINKTIEEDRFDIPEVP 439


>tr|A7PU30|A7PU30_VITVI Chromosome chr7 scaffold_31, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023635001
PE=4 SV=1
Length = 417

Score = 64.7 bits (156), Expect = 3e-09
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMM 383
+FVQRYKN+L+ ED+D+L+ L+ +H L+TPEI REL++S NRG+ D+M+
Sbjct: 361 TFVQRYKNQLRKEDKDSLKTLIENQRHKLVTPEISRELNNSRNRGEKEDDLML 413


>tr|A7QN53|A7QN53_VITVI Chromosome undetermined scaffold_130, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00002368001 PE=4 SV=1
Length = 417

Score = 63.5 bits (153), Expect = 7e-09
Identities = 27/53 (50%), Positives = 42/53 (79%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMM 383
+FVQRYKN+L+ ED+D+L+ L+ +H L+TP+I REL++S NRG+ D+M+
Sbjct: 361 TFVQRYKNQLRKEDKDSLKTLIENQRHRLVTPDISRELNNSRNRGEEEDDLML 413


>tr|A3BXW4|A3BXW4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_027886 PE=4 SV=1
Length = 501

Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = -2

Query: 541 SFVQRYKNELKHEDRDNLEKLMRQHKHYLMTPEIKRELHHSLNRGQNGADVMMDDAIQFT 362
+FV+RYKNEL+ +D++ L +L+ KHYL+TPEI+REL S NRG+ D I
Sbjct: 432 AFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEK-------DTIMSI 484

Query: 361 GIKTPHIEEDIWNLL 317
I T H + ++ ++
Sbjct: 485 YILTVHADSYLFCII 499