BP912418 |
Clone id |
YMU001_000018_G09 |
Library |
YMU01 |
Length |
546 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000018_G09. |
Accession |
BP912418 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1767Contig1 |
Sequence |
GCTCTCCTTTACTGTCAAAAGCAGCCTTGCAAGGGGGTCCTCTTATCTCTTTTTCCATTT CATCTTGCATTGAAGCTAACTCTTCTACAGTCACCACTATCCTCCTTGGAGTCCCAAATA TAGATATAGAACCATGCTTTAGTCTCTGAGCTTTCAAGCATGCCTGAATAGCTTCTTCCA GCTGTTTAATACTGCTCGAAACATCCTGTGAAGGTAGCTCTTCTGATCCAATCTCAAGCA CAAATGTTCGTGCAAGTAACACCTTTTCAGCTGCTTGAGATGTTGGATGCGAGGGCTCAC TGCAGGGGTTTTCTGTCCATACACCTAAAGGATGATCAAGAGTTTCCCTTGTCTTAACCC ACAGCTGTGCACACTCGCGTGCCAGTCTGCGCATGCGTCCAAAAAAGCGTGCTCTTTCTG TTACTCCGACAGCACCCCTAGCATCTAGTATGTTGAAAGCATGAGATGCCTTTAGGACAT AATCATAAGCGGGGATAGCAAGACATTTCTCCAGTAGAGCTTTTGCTTCTGCTTCATAAA GATCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8L785 |
Definition |
sp|Q8L785|SYGM2_ARATH Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana |
Align length |
171 |
Score (bit) |
182.0 |
E-value |
7.0e-46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TR89 |
Definition |
tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
164 |
Score (bit) |
215.0 |
E-value |
1.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912418|Adiantum capillus-veneris mRNA, clone: YMU001_000018_G09. (546 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella paten... 215 1e-54 tr|Q5VRH2|Q5VRH2_ORYSJ Os06g0103600 protein OS=Oryza sativa subs... 184 2e-45 tr|B8B198|B8B198_ORYSI Putative uncharacterized protein OS=Oryza... 184 2e-45 tr|A3B7J3|A3B7J3_ORYSJ Putative uncharacterized protein OS=Oryza... 184 2e-45 tr|A8IB17|A8IB17_CHLRE Predicted protein OS=Chlamydomonas reinha... 165 1e-39 tr|A4RTK9|A4RTK9_OSTLU Predicted protein OS=Ostreococcus lucimar... 153 7e-36 tr|Q01DM7|Q01DM7_OSTTA Putative aminoacyl-t-RNA synthetase (ISS)... 152 9e-36 tr|Q2JDI9|Q2JDI9_FRASC Glycine--tRNA ligase OS=Frankia sp. (stra... 150 4e-35 tr|Q0RP65|Q0RP65_FRAAA Glycyl-tRNA synthetase (GlyRS) OS=Frankia... 141 3e-32 tr|A8KYX1|A8KYX1_FRASN Glycyl-tRNA synthetase, beta subunit OS=F... 130 3e-29 tr|Q6MDD2|Q6MDD2_PARUW Probable glycyl-tRNA synthetase OS=Protoc... 130 5e-29 tr|Q3KKP5|Q3KKP5_CHLTA Glycyl-tRNA synthetase OS=Chlamydia trach... 121 3e-26 tr|B0BAQ2|B0BAQ2_CHLTB Glycyl-tRNA synthetase OS=Chlamydia trach... 121 3e-26 tr|B0B923|B0B923_CHLT2 Glycyl-tRNA synthetase OS=Chlamydia trach... 121 3e-26 tr|A8M6Q1|A8M6Q1_SALAI Glycyl-tRNA synthetase, beta subunit OS=S... 119 1e-25 tr|Q5L560|Q5L560_CHLAB Glycyl-tRNA synthetase alpha chain OS=Chl... 117 5e-25 tr|Q821W2|Q821W2_CHLCV Glycyl-tRNA synthetase, tetrameric type, ... 115 2e-24 tr|Q255S5|Q255S5_CHLFF Glycyl tRNA synthetase OS=Chlamydophila f... 113 6e-24 tr|Q83I31|Q83I31_TROW8 Glycyl-tRNA synthetase OS=Tropheryma whip... 101 3e-20 tr|Q83G33|Q83G33_TROWT Glycyl-tRNA synthetase alpha chain and be... 101 3e-20 tr|A5GLC9|A5GLC9_SYNPW Glycyl-tRNA synthetase beta subunit OS=Sy... 83 8e-15 tr|A4CUD3|A4CUD3_SYNPV Glycyl-tRNA synthetase, beta subunit OS=S... 83 8e-15 tr|Q0IAN3|Q0IAN3_SYNS3 Glycyl-tRNA synthetase, beta subunit OS=S... 82 1e-14 tr|B2V9P8|B2V9P8_SULSY Glycyl-tRNA synthetase, alpha subunit OS=... 82 2e-14 tr|B0TAF7|B0TAF7_HELMI Glycyl-tRNA synthetase, alpha subunit OS=... 80 5e-14 tr|Q3AK99|Q3AK99_SYNSC Glycyl-tRNA synthetase, beta subunit OS=S... 80 7e-14 tr|B7AYC0|B7AYC0_9FIRM Putative uncharacterized protein OS=Mitsu... 80 7e-14 tr|A1HPC2|A1HPC2_9FIRM Glycine--tRNA ligase OS=Thermosinus carbo... 79 1e-13 tr|Q3AXJ5|Q3AXJ5_SYNS9 Glycyl-tRNA synthetase, beta subunit OS=S... 79 2e-13 tr|B8FUJ1|B8FUJ1_DESHD Glycyl-tRNA synthetase, alpha subunit OS=... 79 2e-13
>tr|A9TR89|A9TR89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_171503 PE=4 SV=1 Length = 1124
Score = 215 bits (548), Expect = 1e-54 Identities = 107/164 (65%), Positives = 132/164 (80%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 IPAYD+VLK SHAFNILDARGA+GVTERAR+FGRMR LAR+CAQ W ++RE L +PLGVW Sbjct: 359 IPAYDHVLKTSHAFNILDARGAIGVTERARYFGRMRTLARQCAQKWAESREKLGYPLGVW 418
Query: 316 TENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQRLK 137 E CSE +A ++ ++RTFVLEIGSEELP QDVSS+I QL+ + + LK +RL+ Sbjct: 419 EEFRCSEI---IPEATSQIDVSRTFVLEIGSEELPPQDVSSAISQLKGVVPSLLKEKRLQ 475
Query: 136 HGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 HGSIS+ GTPRR+VV VEELA+ QD+ EKE+RGPP AFD++G Sbjct: 476 HGSISVQGTPRRLVVMVEELATQQDDNEKEVRGPPAAKAFDAEG 519
>tr|Q5VRH2|Q5VRH2_ORYSJ Os06g0103600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0075G19.30-1 PE=4 SV=1 Length = 1068
Score = 184 bits (468), Expect = 2e-45 Identities = 96/166 (57%), Positives = 120/166 (72%), Gaps = 2/166 (1%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 IPAYD+VLKASHAFNILD+RG VGVTERAR+FGRMR LAR+CAQLWVKTRE L +PLG + Sbjct: 301 IPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVKTRENLGYPLGTY 360
Query: 316 TENPCSEPSHPTSQAAEKVLLA--RTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQR 143 E+ P H + + + K ++ R FVLEIG+EELP DV + KQLE+++ L+ +R Sbjct: 361 QESNLIYP-HVSEKPSRKGVVGQPRAFVLEIGTEELPPHDVIEATKQLEKSLIQILEKRR 419
Query: 142 LKHGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 L HG + +GTPRR+ V VE L Q E E E+RGPP AFD +G Sbjct: 420 LSHGKVRSYGTPRRLAVVVENLNMKQMEEEIELRGPPVAKAFDQEG 465
>tr|B8B198|B8B198_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21278 PE=4 SV=1 Length = 1068
Score = 184 bits (468), Expect = 2e-45 Identities = 96/166 (57%), Positives = 120/166 (72%), Gaps = 2/166 (1%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 IPAYD+VLKASHAFNILD+RG VGVTERAR+FGRMR LAR+CAQLWVKTRE L +PLG + Sbjct: 301 IPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVKTRENLGYPLGTY 360
Query: 316 TENPCSEPSHPTSQAAEKVLLA--RTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQR 143 E+ P H + + + K ++ R FVLEIG+EELP DV + KQLE+++ L+ +R Sbjct: 361 QESNLIYP-HVSEKPSRKGVVGQPRAFVLEIGTEELPPHDVIEATKQLEKSLIQILEKRR 419
Query: 142 LKHGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 L HG + +GTPRR+ V VE L Q E E E+RGPP AFD +G Sbjct: 420 LSHGKVRSYGTPRRLAVVVENLNMKQMEEEIELRGPPVAKAFDQEG 465
>tr|A3B7J3|A3B7J3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019015 PE=4 SV=1 Length = 1122
Score = 184 bits (468), Expect = 2e-45 Identities = 96/166 (57%), Positives = 120/166 (72%), Gaps = 2/166 (1%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 IPAYD+VLKASHAFNILD+RG VGVTERAR+FGRMR LAR+CAQLWVKTRE L +PLG + Sbjct: 346 IPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVKTRENLGYPLGTY 405
Query: 316 TENPCSEPSHPTSQAAEKVLLA--RTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQR 143 E+ P H + + + K ++ R FVLEIG+EELP DV + KQLE+++ L+ +R Sbjct: 406 QESNLIYP-HVSEKPSRKGVVGQPRAFVLEIGTEELPPHDVIEATKQLEKSLIQILEKRR 464
Query: 142 LKHGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 L HG + +GTPRR+ V VE L Q E E E+RGPP AFD +G Sbjct: 465 LSHGKVRSYGTPRRLAVVVENLNMKQMEEEIELRGPPVAKAFDQEG 510
>tr|A8IB17|A8IB17_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_126079 PE=4 SV=1 Length = 1097
Score = 165 bits (418), Expect = 1e-39 Identities = 85/164 (51%), Positives = 106/164 (64%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 IPAYD++LK SH FN++DARGAVGVTERA F +R LARE LWV RE L+HPLG+ Sbjct: 324 IPAYDHLLKLSHTFNLMDARGAVGVTERAECFAVLRGLAREITGLWVSRREELEHPLGLI 383
Query: 316 TENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQRLK 137 P P A+ + RTFVLE+G EELP DV S++ QL E + A L RL Sbjct: 384 PPPAVPSPQRPAPPASAE---PRTFVLEVGGEELPPDDVVSAVHQLRERVPALLAKLRLS 440
Query: 136 HGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 HG++ + GTPRR+ V VE LA+ Q E ++RGPP K AF + G Sbjct: 441 HGAVHVEGTPRRLAVVVEALAAAQTSEESKVRGPPAKQAFAADG 484
>tr|A4RTK9|A4RTK9_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_29834 PE=4 SV=1 Length = 1051
Score = 153 bits (386), Expect = 7e-36 Identities = 79/164 (48%), Positives = 106/164 (64%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 +PA+D +LKASHAFN+LDARGAVGVTER + F MR+LARE AQLWV RE L +PLG+ Sbjct: 285 LPAFDNLLKASHAFNVLDARGAVGVTERQKLFASMRKLARETAQLWVARREELGYPLGLS 344
Query: 316 TENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQRLK 137 P T V+E+G+EELP QDV+S+ +Q EA+ A LKA+ L Sbjct: 345 EAPPAKSLVENTGAIP---TAPADCVIELGTEELPPQDVTSTSRQFHEAVDALLKAEGLT 401
Query: 136 HGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 H IS+ TPRR ++++ L++ Q +E+ +RGPP AF+ G Sbjct: 402 HAGISVGATPRRFTLSIKALSAGQANVEERVRGPPLSRAFEEDG 445
>tr|Q01DM7|Q01DM7_OSTTA Putative aminoacyl-t-RNA synthetase (ISS) (Fragment) OS=Ostreococcus tauri GN=Ot02g07010 PE=4 SV=1 Length = 950
Score = 152 bits (385), Expect = 9e-36 Identities = 78/164 (47%), Positives = 107/164 (65%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 +PA+D +LKASHAFN+LDARGAVGVTER + F MRRLARE AQLWV RE L +PLG+ Sbjct: 184 LPAFDNLLKASHAFNVLDARGAVGVTERQKLFASMRRLARETAQLWVARREELGYPLGLP 243
Query: 316 TENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQRLK 137 P + T A +A ++E+G+EELP QDV+S+ +QL +A+ A L A L Sbjct: 244 EATPGTSSIETTGAAP---TMAADCLIELGTEELPPQDVASAARQLFDAVDAALAAAGLT 300
Query: 136 HGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 H + + TPRR + ++ L+ Q ++E+ +RGPP AF+ G Sbjct: 301 HEGVCVGSTPRRFAIDIKALSPGQPDVEERVRGPPLSRAFEDDG 344
>tr|Q2JDI9|Q2JDI9_FRASC Glycine--tRNA ligase OS=Frankia sp. (strain CcI3) GN=Francci3_1275 PE=4 SV=1 Length = 1017
Score = 150 bits (379), Expect = 4e-35 Identities = 76/164 (46%), Positives = 108/164 (65%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 +PA+ YVLK SHAFNILD+RGAV TERA F +MR L+RE A LW RE L HPLG Sbjct: 231 VPAHSYVLKCSHAFNILDSRGAVSTTERATSFAQMRGLSREVATLWRDRREELGHPLGAA 290
Query: 316 TENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQRLK 137 + P + P+ T++A E T + EIG+EELP+ +V+ +++ + + L A RL Sbjct: 291 SPPPAAVPAAVTTRAEEPA----TLLFEIGTEELPAAEVTRTVEAVRAGLVERLAATRLT 346
Query: 136 HGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 HG++ + GTPRRIV V+E+A + ++E+ +RGP AA+D+ G Sbjct: 347 HGAVRVLGTPRRIVAIVDEVAPREPDVERVVRGPRVSAAYDAAG 390
>tr|Q0RP65|Q0RP65_FRAAA Glycyl-tRNA synthetase (GlyRS) OS=Frankia alni (strain ACN14a) GN=glyQS PE=4 SV=1 Length = 1069
Score = 141 bits (355), Expect = 3e-32 Identities = 75/164 (45%), Positives = 103/164 (62%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 +PA+ YVLK SHAFNILD+RGAV TERA F +MR L+RE A LW RE L HPLGV Sbjct: 231 VPAHSYVLKCSHAFNILDSRGAVSTTERATSFAQMRGLSREVAALWRDRREELGHPLGVA 290
Query: 316 TENPCSEPSHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQRLK 137 + P + P T+ V T + EIG+EELP+ +V+ + + + L A RL Sbjct: 291 SPPPAAVPVAMTT----AVRAPATLLFEIGTEELPAAEVTRTAAAVRAGLLDRLAATRLT 346
Query: 136 HGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 HG + + GTPRRIV V+++A + ++E+ +RGP AA+D+ G Sbjct: 347 HGDVRVQGTPRRIVAIVDDVAPREPDVERVVRGPRVAAAYDAAG 390
>tr|A8KYX1|A8KYX1_FRASN Glycyl-tRNA synthetase, beta subunit OS=Frankia sp. (strain EAN1pec) GN=Franean1_2121 PE=4 SV=1 Length = 1019
Score = 130 bits (328), Expect = 3e-29 Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 2/166 (1%) Frame = -3
Query: 496 IPAYDYVLKASHAFNILDARGAVGVTERARFFGRMRRLARECAQLWVKTRETLDHPLGVW 317 +PA+ YVLK SHAFNILD+RGAV TERA F +MR ++RE AQLW R+ L PLG Sbjct: 231 VPAHIYVLKCSHAFNILDSRGAVSTTERATSFAQMRGMSREVAQLWRDRRDELGDPLG-- 288
Query: 316 TENPCSEP--SHPTSQAAEKVLLARTFVLEIGSEELPSQDVSSSIKQLEEAIQACLKAQR 143 E P P + P AA A T + EIG+EELP+ +V+ + A+ L A R Sbjct: 289 -EAPRLAPAAARPVDPAAVPAGPA-TLLFEIGTEELPAAEVTRQTAAVRAALVERLAATR 346
Query: 142 LKHGSISIFGTPRRIVVTVEELASMQDEMEKEIRGPPCKAAFDSKG 5 L +G + + GTPRRIV V+++A + ++E+ +RGP AA+D++G Sbjct: 347 LTYGELRVQGTPRRIVAIVDDVAPREPDVERVVRGPRRSAAYDAQG 392
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