BP912434 |
Clone id |
YMU001_000019_E04 |
Library |
YMU01 |
Length |
530 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000019_E04. |
Accession |
BP912434 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3971Contig1 |
Sequence |
CCTGTCTTCCTTGTAACATGAAGGCTCATTGCAATCAGTCAACATGACATAGTTCATAGA TGCAACAAACCTATCAGGAGGTCGCGTGATACGTCCAGATCTACGCACAACAGGTGGCTC AGGCTCACCCACAACCTGTGGTTCCAATCTATCCTGTCCTTGCTCCTCTTGAGCCCTGAC ATTTTGTCTTGCACGTGCAGGTCCATCTTCTTGGAAGACAACTCTTCTAATCTCCTCAAC CCTCTCTGGTTTAGAATGATATTTGGATTCATTAAAGTGAACATCACTGCTGCGGATAAC CTTTCTGGATTCGGGATCCCAAAGTCTGTACCCCATCTCACCAGAATTACCATAGCCTAG AAAGATGCACTTTCTACTCTTTGTCTCAAGTTTGTTCCTAAATTCCTTTGGAACGTGAGT ATATGCCTCACAGCCAAAGACTCTGAGATGCTTGTATGAGGGCATTTTGCCTGACCATAC CATCTCTGACACTGAATCCTTCTGCAAAACCTTGCTAGGAGATCTATTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P10978 |
Definition |
sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum |
Align length |
198 |
Score (bit) |
114.0 |
E-value |
3.0e-25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5AVU6 |
Definition |
tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
179 |
Score (bit) |
122.0 |
E-value |
9.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912434|Adiantum capillus-veneris mRNA, clone: YMU001_000019_E04. (530 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis... 122 9e-27 tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis... 121 2e-26 tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis... 121 3e-26 tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis... 121 3e-26 tr|A5B5N4|A5B5N4_VITVI Putative uncharacterized protein OS=Vitis... 121 3e-26 tr|A5BK92|A5BK92_VITVI Putative uncharacterized protein OS=Vitis... 120 4e-26 tr|A5AM64|A5AM64_VITVI Putative uncharacterized protein OS=Vitis... 120 4e-26 tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis... 120 6e-26 tr|A5AMG2|A5AMG2_VITVI Putative uncharacterized protein OS=Vitis... 119 7e-26 tr|A5BD56|A5BD56_VITVI Putative uncharacterized protein OS=Vitis... 119 1e-25 tr|A5BIC7|A5BIC7_VITVI Putative uncharacterized protein OS=Vitis... 119 1e-25 tr|A5BJ32|A5BJ32_VITVI Putative uncharacterized protein OS=Vitis... 118 2e-25 tr|A5B1S3|A5B1S3_VITVI Putative uncharacterized protein OS=Vitis... 118 2e-25 tr|A5AQV5|A5AQV5_VITVI Putative uncharacterized protein OS=Vitis... 117 5e-25 tr|A5ARK1|A5ARK1_VITVI Putative uncharacterized protein OS=Vitis... 116 6e-25 tr|A5BJQ3|A5BJQ3_VITVI Putative uncharacterized protein OS=Vitis... 116 8e-25 tr|A5BFU1|A5BFU1_VITVI Putative uncharacterized protein OS=Vitis... 115 1e-24 tr|A5B6M5|A5B6M5_VITVI Putative uncharacterized protein OS=Vitis... 115 1e-24 tr|A5BBW7|A5BBW7_VITVI Putative uncharacterized protein OS=Vitis... 113 7e-24 tr|A5BA89|A5BA89_VITVI Putative uncharacterized protein OS=Vitis... 113 7e-24 tr|A5B0E4|A5B0E4_VITVI Putative uncharacterized protein OS=Vitis... 113 7e-24 tr|A5C9A6|A5C9A6_VITVI Putative uncharacterized protein OS=Vitis... 112 1e-23 tr|A5BGX3|A5BGX3_VITVI Putative uncharacterized protein OS=Vitis... 112 2e-23 tr|A5BM25|A5BM25_VITVI Putative uncharacterized protein OS=Vitis... 111 2e-23 tr|A5B377|A5B377_VITVI Putative uncharacterized protein OS=Vitis... 110 3e-23 tr|A5C844|A5C844_VITVI Putative uncharacterized protein OS=Vitis... 108 2e-22 tr|A5AK46|A5AK46_VITVI Putative uncharacterized protein OS=Vitis... 107 3e-22 tr|A5BWL7|A5BWL7_VITVI Putative uncharacterized protein OS=Vitis... 107 4e-22 tr|A5B2G6|A5B2G6_VITVI Putative uncharacterized protein OS=Vitis... 106 8e-22 tr|Q9AU17|Q9AU17_SOLCI Polyprotein-like OS=Solanum chilense PE=4... 105 1e-21
>tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024659 PE=4 SV=1 Length = 1287
Score = 122 bits (307), Expect = 9e-27 Identities = 67/179 (37%), Positives = 100/179 (55%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 596 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCISYVHIDSDARSKLDAKSKICFFIGYG 654
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNES-KYHSKPERVEEIRRVVFQEDG----PARARQ 184 + + GYR WD ++RK+IRS +V FNE Y + V ++ + ++ + Sbjct: 655 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSSVVSDVTEIDQKKSEFVNLDELTKS 713
Query: 183 NVRAQEEQGQDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 V+ E+ ++ + VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 714 TVQKGGEEDKENVNSQVDLSTPVVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 772
>tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035336 PE=4 SV=1 Length = 1244
Score = 121 bits (304), Expect = 2e-26 Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 559 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCXSYVHIDSDARSKLDAKSKICFFIGYG 617
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQ 184 + + GYR WD ++RK+IRS +V FNE + V + Q+ Sbjct: 618 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTES 676
Query: 183 NVRAQEEQGQDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 V+ E+ ++ + VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 677 TVQKGGEEDKENVNSQVDLSTPVVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 735
>tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001479 PE=4 SV=1 Length = 1246
Score = 121 bits (303), Expect = 3e-26 Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 585 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYG 643
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQ 184 + + GYR WD ++RK+IRS +V FNE + V + Q+ Sbjct: 644 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTES 702
Query: 183 NVRAQEEQGQDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 V+ E+ ++ + VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 703 TVQKGGEEDKENVNSQVDLSTPVVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 761
>tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040966 PE=4 SV=1 Length = 1212
Score = 121 bits (303), Expect = 3e-26 Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 539 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYG 597
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQ 184 + + GYR WD ++RK+IRS +V FNE + V + Q+ Sbjct: 598 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTES 656
Query: 183 NVRAQEEQGQDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 V+ E+ ++ + VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 657 TVQKGGEEDKENVNSQVDLSTPXVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 715
>tr|A5B5N4|A5B5N4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005765 PE=4 SV=1 Length = 1261
Score = 121 bits (303), Expect = 3e-26 Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 576 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYG 634
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQ 184 + + GYR WD ++RK+IRS +V FNE + V + Q+ Sbjct: 635 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTES 693
Query: 183 NVRAQEEQGQDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 V+ E+ ++ + VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 694 TVQKGGEEDKENVNSQVDLSTPIVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 752
>tr|A5BK92|A5BK92_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023139 PE=4 SV=1 Length = 1222
Score = 120 bits (301), Expect = 4e-26 Identities = 69/174 (39%), Positives = 97/174 (55%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 563 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCXSYVHIDSDARSKLDAKSKICFFIGYG 621
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDGPARARQNVRAQ 169 + + GYR WD ++RK+IRS +V FNE + K V++ G ++NV +Q Sbjct: 622 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMY-KDSTVQK---------GGEEDKENVNSQ 670
Query: 168 EEQGQDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 + VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 671 VD-----------LSTPVVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 713
>tr|A5AM64|A5AM64_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037436 PE=4 SV=1 Length = 1183
Score = 120 bits (301), Expect = 4e-26 Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 563 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCISYVHIDSDARSKLDAKSKICFFIGYG 621
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNES-KYHSKPERVEEIRRVVFQEDG----PARARQ 184 + + GYR WD ++RK+IRS +V FNE Y + V ++ + ++ + Sbjct: 622 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSSVVSDVTEIDQKKSEFVNLDELTKS 680
Query: 183 NVRAQEEQGQDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 V+ E+ ++ + VRRS R RPP R+ +NY++LTD EP CY E Sbjct: 681 TVQKGGEEDKENVNSQVDLSTPVVEVRRSSRNXRPPQRYSPVLNYLLLTDGGEPECYDE 739
>tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032634 PE=4 SV=1 Length = 1298
Score = 120 bits (300), Expect = 6e-26 Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 613 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYG 671
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQ 184 + + GYR WD ++RK+IRS +V FNE + V + Q+ Sbjct: 672 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRLTVTSXVTEIDQKKSEFVNLDELTES 730
Query: 183 NVRAQEEQGQDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 V+ + E+ ++ + VRRS R RPP R+ +NY++LTD EP CY E Sbjct: 731 TVQKRGEEDKENVNSKVDLRTPVVEVRRSSRNIRPPQRYSPVLNYLLLTDGGEPECYNE 789
>tr|A5AMG2|A5AMG2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018063 PE=4 SV=1 Length = 1294
Score = 119 bits (299), Expect = 7e-26 Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS V + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 546 NRGPS-VPMEFRLPEEVWSGKEVKFSHLKVFGCISYVHIDFDSRSKLDAKSKICFFIGYG 604
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNES-KYHSKPERVEEIRRVVFQEDGPARARQNVRA 172 + + GYR WD ++RK+IRS +V FNE Y + V ++ + ++ + + + Sbjct: 605 GNEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKYRSSIVSDVTEIDQKKSEFVNLDELIES 664
Query: 171 QEEQG----QDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 ++G ++ + V RS R RPP R+ +NY++LTD EP CY E Sbjct: 665 TVQKGGEEDKENVNSQVNLSTPVVEVHRSSRNIRPPQRYSPVLNYLLLTDGGEPECYDE 723
>tr|A5BD56|A5BD56_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028342 PE=4 SV=1 Length = 1252
Score = 119 bits (298), Expect = 1e-25 Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 5/179 (2%) Frame = -3
Query: 528 NRSPSKVLQKDSVSEMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYG 349 NR PS + + + E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG Sbjct: 384 NRGPS-IPMEFRLPEEVWSGKEMKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYG 442
Query: 348 NSGEMGYRLWDPESRKVIRSSDVHFNES-KYHSKPERVEEIRRVVFQEDGPARARQNVRA 172 + + GYR WD ++RK+IRS +V FNE Y + V ++ + ++ + + + Sbjct: 443 DE-KFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVVSDVTEIDQKKSEFVKLDELTES 501
Query: 171 QEEQG----QDRLXXXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 ++G ++ + VRRS R RPP R+ +NY++LTD EP CY E Sbjct: 502 TVQKGGKEDKENVNSQVDLSTPIAEVRRSSRNIRPPKRYSPGLNYLLLTDGGEPECYDE 560
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