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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912448
Clone id YMU001_000019_E09
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000019_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTGGGCCAAACTCACAACTGTGAGTAGCGTTTTACTATTAGCATAATAACATAACATAT
TACATCCCGTCCATGTTCAACACGAGCCATGGAGCTCATACACAACAGATACTGCCACAA
TCCAACCATGGACAACCAAAAAGAAACGGTTACATAACCTCGAAGGGTGCCACCAAGACT
ATCATGACTTCCACTAACGACAGCCTCACCCTCTAGGGAACCCCTGAACAACATAAACTC
CCAAGCATACAAGGCAAGTACATCCGGCTTTTACATGGAGCCGTAACTATACAGTATGAC
CAAAGAACCACGACCATACACAGGCTTTTTGCCAGGAAGCCAATAACCTACACAACACCA
AACCCACGGACATGGGACTCCACAGCAAGGCCCAACAATATGCAACCAAACCCTCCACAA
TCTTCGCAACCGAGCAAAAATTCCACCAGATCGAACCACTGTAGTTGAGAAAACCTCGCA
GCACCAAGACCGAACAAGGACACCAACACACGAACTAGAGCAGTAGAGGTTGTCACAC
■■Homology search results ■■ -
sp_hit_id Q8ST70
Definition sp|Q8ST70|Y503_ENCCU UPF0328 protein ECU05_0030/ECU10_1870 OS=Encephalitozoon cuniculi
Align length 120
Score (bit) 31.6
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912448|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_E09.
         (538 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8ST70|Y503_ENCCU UPF0328 protein ECU05_0030/ECU10_1870 OS=En...    32   2.5  
sp|Q89AA4|CYOB_BUCBP Ubiquinol oxidase subunit 1 OS=Buchnera aph...    31   3.4  
sp|P0AAS4|YBBJ_SHIFL Inner membrane protein ybbJ OS=Shigella fle...    30   7.5  
sp|P0AAS3|YBBJ_ECOLI Inner membrane protein ybbJ OS=Escherichia ...    30   7.5  
sp|Q8NXF6|MNHA1_STAAW Na(+)/H(+) antiporter subunit A1 OS=Staphy...    30   7.5  
sp|Q9ZNG6|MNHA1_STAAU Na(+)/H(+) antiporter subunit A1 OS=Staphy...    30   7.5  
sp|Q6GAX4|MNHA1_STAAS Na(+)/H(+) antiporter subunit A1 OS=Staphy...    30   7.5  
sp|Q6GID6|MNHA1_STAAR Na(+)/H(+) antiporter subunit A1 OS=Staphy...    30   7.5  
sp|P60675|MNHA1_STAAN Na(+)/H(+) antiporter subunit A1 OS=Staphy...    30   7.5  
sp|P60674|MNHA1_STAAM Na(+)/H(+) antiporter subunit A1 OS=Staphy...    30   7.5  
sp|Q5HHD3|MNHA1_STAAC Na(+)/H(+) antiporter subunit A1 OS=Staphy...    30   7.5  
sp|P54826|GAS1_HUMAN Growth arrest-specific protein 1 OS=Homo sa...    30   7.5  
sp|Q02105|C1QC_MOUSE Complement C1q subcomponent subunit C OS=Mu...    30   9.8  
sp|Q06671|ATG23_YEAST Autophagy-related protein 23 OS=Saccharomy...    30   9.8  
sp|A7A1V1|ATG23_YEAS7 Autophagy-related protein 23 OS=Saccharomy...    30   9.8  

>sp|Q8ST70|Y503_ENCCU UPF0328 protein ECU05_0030/ECU10_1870
           OS=Encephalitozoon cuniculi GN=ECU05_0030 PE=3 SV=1
          Length = 489

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
 Frame = +3

Query: 138 KKKRLHNLEGCHQDYHDFH*RQPHPLGNP*TT*TP--KHTRQVHPAFTWSRNYTV*PKNH 311
           KKK+ ++ EGCH      H   P P      T  P   H    HP  T + N    P   
Sbjct: 100 KKKKKNHTEGCHT-----HEANPEPNTKHTETEPPIISHCPPPHPGPTATPNLLPCP--- 151

Query: 312 DHTQAFCQEANNLHNTKPTDMGLHSKAQQYATKPSTIFATEQKFHQIEPL*LRKPRSTKT 491
           + T +FCQ   +   + P ++   S   ++ +K  T     Q      P+  + PR T T
Sbjct: 152 NPTSSFCQNTRD-SPSLPPNVQTWSIFPKHPSKDVTAQVKSQSVSHRAPITYQPPRPTTT 210


>sp|Q89AA4|CYOB_BUCBP Ubiquinol oxidase subunit 1 OS=Buchnera
           aphidicola subsp. Baizongia pistaciae GN=cyoB PE=3 SV=1
          Length = 659

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -1

Query: 421 IVEGLVAYCWALL--WSPMSVGLVLCRLLASWQKACVWSWFFG 299
           I+ G+V  C+A +  W P   G +L      W K   W WFFG
Sbjct: 427 IIGGVVFGCFAGITYWFPKLFGFMLSE---KWGKRAFWCWFFG 466


>sp|P0AAS4|YBBJ_SHIFL Inner membrane protein ybbJ OS=Shigella
           flexneri GN=ybbJ PE=3 SV=2
          Length = 152

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -1

Query: 490 VLVLRGFLNYSGSIWWNFCSVAKIVEGLVAYCWALLWSPMSVGLVLCRLLASWQKACVWS 311
           +L+    L  +G + W+   VA ++ GLV +   L W    V   +  LLA+W     W 
Sbjct: 19  LLLAAEMLGGNGYLLWS--GVAAVITGLVVWLVPLGWEWQGVMFAILTLLAAW---LWWK 73

Query: 310 W 308
           W
Sbjct: 74  W 74


>sp|P0AAS3|YBBJ_ECOLI Inner membrane protein ybbJ OS=Escherichia
           coli (strain K12) GN=ybbJ PE=1 SV=2
          Length = 152

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -1

Query: 490 VLVLRGFLNYSGSIWWNFCSVAKIVEGLVAYCWALLWSPMSVGLVLCRLLASWQKACVWS 311
           +L+    L  +G + W+   VA ++ GLV +   L W    V   +  LLA+W     W 
Sbjct: 19  LLLAAEMLGGNGYLLWS--GVAAVITGLVVWLVPLGWEWQGVMFAILTLLAAW---LWWK 73

Query: 310 W 308
           W
Sbjct: 74  W 74


>sp|Q8NXF6|MNHA1_STAAW Na(+)/H(+) antiporter subunit A1
           OS=Staphylococcus aureus (strain MW2) GN=mnhA1 PE=3 SV=1
          Length = 801

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 321 VYGRGSLVILYSYGSM*KPDVLALYAWEFMLFRGSLEG 208
           + G GSLV+LYS G + K + L  +    +LF G++ G
Sbjct: 87  ISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLG 124


>sp|Q9ZNG6|MNHA1_STAAU Na(+)/H(+) antiporter subunit A1
           OS=Staphylococcus aureus GN=mnhA1 PE=1 SV=1
          Length = 801

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 321 VYGRGSLVILYSYGSM*KPDVLALYAWEFMLFRGSLEG 208
           + G GSLV+LYS G + K + L  +    +LF G++ G
Sbjct: 87  ISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLG 124


>sp|Q6GAX4|MNHA1_STAAS Na(+)/H(+) antiporter subunit A1
           OS=Staphylococcus aureus (strain MSSA476) GN=mnhA1 PE=3
           SV=1
          Length = 801

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 321 VYGRGSLVILYSYGSM*KPDVLALYAWEFMLFRGSLEG 208
           + G GSLV+LYS G + K + L  +    +LF G++ G
Sbjct: 87  ISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLG 124


>sp|Q6GID6|MNHA1_STAAR Na(+)/H(+) antiporter subunit A1
           OS=Staphylococcus aureus (strain MRSA252) GN=mnhA1 PE=3
           SV=1
          Length = 801

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 321 VYGRGSLVILYSYGSM*KPDVLALYAWEFMLFRGSLEG 208
           + G GSLV+LYS G + K + L  +    +LF G++ G
Sbjct: 87  ISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLG 124


>sp|P60675|MNHA1_STAAN Na(+)/H(+) antiporter subunit A1
           OS=Staphylococcus aureus (strain N315) GN=mnhA1 PE=1
           SV=1
          Length = 801

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 321 VYGRGSLVILYSYGSM*KPDVLALYAWEFMLFRGSLEG 208
           + G GSLV+LYS G + K + L  +    +LF G++ G
Sbjct: 87  ISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLG 124


>sp|P60674|MNHA1_STAAM Na(+)/H(+) antiporter subunit A1
           OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
           GN=mnhA1 PE=3 SV=1
          Length = 801

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 321 VYGRGSLVILYSYGSM*KPDVLALYAWEFMLFRGSLEG 208
           + G GSLV+LYS G + K + L  +    +LF G++ G
Sbjct: 87  ISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLG 124
tr_hit_id Q7XK97
Definition tr|Q7XK97|Q7XK97_ORYSJ OSJNBb0020J19.13 protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica
Align length 87
Score (bit) 35.0
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912448|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_E09.
         (538 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7XK97|Q7XK97_ORYSJ OSJNBb0020J19.13 protein (Putative unchar...    35   2.5  
tr|A9WMW1|A9WMW1_RENSM Hypothetical membrane protein OS=Renibact...    35   3.3  
tr|A9VF71|A9VF71_BACWK Putative uncharacterized protein OS=Bacil...    35   3.3  
tr|B6N9J0|B6N9J0_BRAFL Putative uncharacterized protein OS=Branc...    35   3.3  
tr|A8FD00|A8FD00_BACP2 ABC superfamily ATP binding cassette tran...    34   4.3  
tr|A2Q8I6|A2Q8I6_ASPNC Contig An01c0160, complete genome. OS=Asp...    34   5.6  
tr|Q016Y8|Q016Y8_OSTTA Homology to unknown gene OS=Ostreococcus ...    33   7.3  
tr|Q5G1D0|Q5G1D0_9HYME Rhodopsin (Fragment) OS=Leptanilla sp. D2...    33   7.3  
tr|Q7S415|Q7S415_NEUCR Predicted protein OS=Neurospora crassa GN...    33   7.3  
tr|A2VWX0|A2VWX0_9BURK Putative uncharacterized protein OS=Burkh...    33   9.3  
tr|B8J2I6|B8J2I6_DESDE Na+/solute symporter OS=Desulfovibrio des...    33   9.5  
tr|B6SWC0|B6SWC0_MAIZE Putative uncharacterized protein OS=Zea m...    33   9.5  
tr|B2VWW2|B2VWW2_PYRTR Predicted protein OS=Pyrenophora tritici-...    33   9.5  

>tr|Q7XK97|Q7XK97_ORYSJ OSJNBb0020J19.13 protein (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=OSJNBb0020J19.13 PE=4 SV=2
          Length = 358

 Score = 35.0 bits (79), Expect = 2.5
 Identities = 25/87 (28%), Positives = 37/87 (42%)
 Frame = -3

Query: 413 GFGCILLGLAVESHVRXXXXXXXXXFLAKSLCMVVVLWSYCIVTAPCKSRMYLPCMLGSL 234
           G G I+L   V  HV           L   LC + ++ S   V+ P K  +++  MLG L
Sbjct: 253 GLGVIVLAWLVAPHVGKKAAVICLHMLLGGLCALTIIISLRFVSFP-KDPIWIYAMLGDL 311

Query: 233 CCSGVP*RVRLSLVEVMIVLVAPFEVM 153
            C  VP    L + +    L+   E+M
Sbjct: 312 VCVLVPGFWSLGITDPQYTLLMRMEIM 338


>tr|A9WMW1|A9WMW1_RENSM Hypothetical membrane protein
           OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM
           20767 / IFO 15589) GN=RSal33209_1686 PE=4 SV=1
          Length = 282

 Score = 34.7 bits (78), Expect = 3.3
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
 Frame = -1

Query: 526 LLL*FVCWCPCSVLVLRGFL--------NYSGSIWWNFCS----VAKIVEGLVAYCWALL 383
           +LL F+   P +VLVL GFL         + G  W N  S    VA +   + A    L 
Sbjct: 1   MLLGFMILTPLAVLVLAGFLIVNGVNMMRHEGRSWGNLLSLIAGVALLTLPVFAVLLVLT 60

Query: 382 WSPMSVGLVLCRLLASWQKACVWSWFFGHTV*L-RLHVKAGCTCLVCLGVYVVQG 221
           W P+++GL             V+  F  + V   R+  +     +V LG  ++ G
Sbjct: 61  WQPIAIGLAALLFFLCSYFGVVFVVFLVYAVVYGRMRYQRSPDAVVVLGSQIING 115


>tr|A9VF71|A9VF71_BACWK Putative uncharacterized protein OS=Bacillus
           weihenstephanensis (strain KBAB4) GN=BcerKBAB4_2227 PE=4
           SV=1
          Length = 296

 Score = 34.7 bits (78), Expect = 3.3
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -1

Query: 472 FLNYSGSIWWNFCSVAKI--VEGLVAYCWALLWSPMSVGLVLCRLLASWQKACVWSWF 305
           F NY+   WW+F  +A I  + G   + W L W  MS  ++   +L      C+ ++F
Sbjct: 206 FFNYTAQTWWSFIGLAFIATILGQTIFNWLLKW--MSATVISMSILGETIGTCILAYF 261


>tr|B6N9J0|B6N9J0_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_126631 PE=4 SV=1
          Length = 1548

 Score = 34.7 bits (78), Expect = 3.3
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = -1

Query: 514  FVCWCPCSVLVLRGFLNYSGSIWWNFCSVAKIVEGLVAYCWALLW--SPMSVGLVLCRLL 341
            FVC     +L        +GS+W+   S   +V G+V  C A+ W  S + + LVL  LL
Sbjct: 1472 FVCASTMDIL--------NGSLWYERLSRYAVVVGMVLACLAVAWRFSALEMSLVLVALL 1523

Query: 340  ASWQKACVWSW 308
             + Q A  + W
Sbjct: 1524 LTAQLADHYRW 1534


>tr|A8FD00|A8FD00_BACP2 ABC superfamily ATP binding cassette
           transporter, ABC protein OS=Bacillus pumilus (strain
           SAFR-032) GN=ylmA PE=3 SV=1
          Length = 259

 Score = 34.3 bits (77), Expect = 4.3
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 67  PSMFNTSHGAHTQQILPQSNHGQPKRNGYITSKGATKTIMTS 192
           P+M  T+H  H ++ILP   H    +NG +  +G TK +MTS
Sbjct: 195 PTMLYTTH--HAEEILPVFQHTLLLKNGSVFDQGKTKEMMTS 234


>tr|A2Q8I6|A2Q8I6_ASPNC Contig An01c0160, complete genome.
            OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
            GN=An01g04470 PE=3 SV=1
          Length = 1288

 Score = 33.9 bits (76), Expect = 5.6
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 220  TPEQHKLPSIQGKYI--RLLHGAVTIQYDQRTTTIHRLFARKPITYTTPNP 366
            TP QH LP + G+Y   +    A+  +  Q     H+   +KP+T   P+P
Sbjct: 991  TPSQHALPRLNGEYSPEKTALSAINSEGPQTLYECHKCHLKKPVTQAQPSP 1041


>tr|Q016Y8|Q016Y8_OSTTA Homology to unknown gene OS=Ostreococcus
           tauri GN=Ot06g02640 PE=4 SV=1
          Length = 2061

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 28/107 (26%), Positives = 39/107 (36%)
 Frame = +1

Query: 46  NNITYYIPSMFNTSHGAHTQQILPQSNHGQPKRNGYITSKGATKTIMTSTNDSLTL*GTP 225
           NN  +  P   N      T Q+   S  G  K+  +  S       +   N  L L G P
Sbjct: 268 NNSWFGYPEDTNPLSSRPTLQLGSISKAGVKKQQSFAPSVELRVVRLDRGNAKLNLQGDP 327

Query: 226 EQHKLPSIQGKYIRLLHGAVTIQYDQRTTTIHRLFARKPITYTTPNP 366
           E  KL ++QGK +    G V +       T      ++P T    NP
Sbjct: 328 EPRKLRNVQGKAVISSAGRVEMDLVMIPETRQTPPTKRPTTMLAKNP 374


>tr|Q5G1D0|Q5G1D0_9HYME Rhodopsin (Fragment) OS=Leptanilla sp. D233
           GN=LW-Rh PE=4 SV=1
          Length = 152

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = -1

Query: 496 CSVLVLRGFLNYSGSIWW----NFCSVAKIVEGLVAYCWALLWSPMSVGLVLCRLLASWQ 329
           C +  L G L   GSIW     +F     IV+GL A        PM++G VL R+L  W 
Sbjct: 91  CELYALFGSLFGCGSIWTMTMISFDRYNVIVKGLSA-------KPMTIGGVLTRILGIWL 143

Query: 328 KACVWS 311
            + +W+
Sbjct: 144 FSLIWT 149


>tr|Q7S415|Q7S415_NEUCR Predicted protein OS=Neurospora crassa
           GN=NCU02320 PE=4 SV=2
          Length = 925

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 10/97 (10%)
 Frame = +1

Query: 130 GQPKRNGYITSKGATKTIMTSTNDSLTL*GTPEQHKLPSIQGKYIRLLHGAVTIQY---D 300
           G  K+ G +  KG       + + + T    P+     ++QG YI + HG  T+ Y    
Sbjct: 392 GSEKQGGLVEEKGEANEGRPTESPTPTTPLNPD-----TVQGLYIPVKHGERTVAYVPVS 446

Query: 301 QRTTTIHRLFARKPIT-------YTTPNPRTWDSTAR 390
             +TT        P+T       ++ P+ RTWD   R
Sbjct: 447 PTSTTCSEKGLESPVTRITSVIFFSPPSLRTWDRDVR 483


>tr|A2VWX0|A2VWX0_9BURK Putative uncharacterized protein
           OS=Burkholderia cenocepacia PC184 GN=BCPG_02532 PE=4
           SV=1
          Length = 407

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 9/56 (16%)
 Frame = +3

Query: 51  HNILHPVHVQHEPWS-------SYTTDTATIQPWTTKKKRLHN--LEGCHQDYHDF 191
           H+++H ++ +  PW+        + T   TI PWT ++  LH+  + G   D  +F
Sbjct: 126 HDLIHLMYFKKTPWAYHLMMALCWVTRPGTINPWTRRRMHLHHHKVSGGESDLEEF 181