BP912451 |
Clone id |
YMU001_000019_F10 |
Library |
YMU01 |
Length |
590 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000019_F10. |
Accession |
BP912451 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTGAAAAATGGACAACGGTACCAAACTCAGGTGGCCATTAAGAAAAGTTATGTACAAGGC CCTTTCCATTTTGCAGTGGTCCTCATTGCTCAGAAACTTAGTTTACAAGGCTATAATACA CAATTTTGGCTAGCTTGGTTTGCCCCAGATGATCTGGCTTTGTTACATTTACATTGTTTT ACCTTGAAAGGTGAAGGATTGGATATAAAATTGCCAACCCACTTTTTGCAGCTCACATTC TCATTCCACTGCATTACACTGCTTTTGTGCCTTCATTCCAAAAGCATGGATGACATTTTG ACAACTATGGGCTCGGGTGCTTTCATGCCGCTCTTGGACTCCTTTGCCTGATGTCTCCGA ACGAGAAATCCTCTGACTGCGGCTTGTATTTTCATCGTAGCCCCCGCTTTGTAAATCTTT TGTATTTGCTTCTCTCTTTCAATCCTAACAGCTAGTTCCAAGCCCCTTGAACCAATTTTG TAAAGAGTTAAAGTTTCCAGAAGCTCTCTAAAAGGGACCCCTTTTCTTTCAACATGAAGG GTTAACACTTCCCACTCAATCCTTGCATACCATTGTGGAGCTGCGTTGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A2SKA3 |
Definition |
sp|A2SKA3|Y3039_METPP UPF0234 protein Mpe_A3039 OS=Methylibium petroleiphilum (strain PM1) |
Align length |
76 |
Score (bit) |
36.6 |
E-value |
0.096 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TL69 |
Definition |
tr|A9TL69|A9TL69_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
72 |
Score (bit) |
85.1 |
E-value |
3.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912451|Adiantum capillus-veneris mRNA, clone: YMU001_000019_F10. (590 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TL69|A9TL69_PHYPA Predicted protein OS=Physcomitrella paten... 85 3e-15 tr|A4RQQ5|A4RQQ5_OSTLU VIC family transporter: calcium ion chann... 64 8e-09 tr|Q01GU7|Q01GU7_OSTTA Sodium channel (ISS) OS=Ostreococcus taur... 61 4e-08 tr|A4HTB9|A4HTB9_LEIIN Putative uncharacterized protein OS=Leish... 36 1.9 tr|Q2TXH6|Q2TXH6_ASPOR Predicted protein OS=Aspergillus oryzae G... 35 2.4 tr|B8NVM6|B8NVM6_ASPFL Putative uncharacterized protein OS=Asper... 35 2.4 tr|Q0PAQ6|Q0PAQ6_CAMJE Putative acyltransferase family protein O... 35 3.2 tr|A1VYX2|A1VYX2_CAMJJ Alginate O-acetyltransferase AlgI OS=Camp... 35 3.2 tr|B1VGH0|B1VGH0_CORU7 DNA primase OS=Corynebacterium urealyticu... 35 4.1 tr|Q8FNH5|Q8FNH5_COREF Putative DNA primase DnaG OS=Corynebacter... 34 5.4 tr|A8XT19|A8XT19_CAEBR Putative uncharacterized protein OS=Caeno... 34 5.4 tr|Q8NND6|Q8NND6_CORGL DNA primase (Bacterial type) OS=Corynebac... 33 9.2 tr|Q4W584|Q4W584_NEIMB Polysialic acid capsule biosynthesis prot... 33 9.2 tr|A4QFX6|A4QFX6_CORGB Putative uncharacterized protein OS=Coryn... 33 9.2 tr|Q83TU5|Q83TU5_NEIME Sialyltransferase (SiaD) (Fragment) OS=Ne... 33 9.2 tr|Q51281|Q51281_NEIME SiaD protein OS=Neisseria meningitidis GN... 33 9.2 tr|B4M5B3|B4M5B3_DROVI GJ11084 OS=Drosophila virilis GN=GJ11084 ... 33 9.2
>tr|A9TL69|A9TL69_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_94200 PE=4 SV=1 Length = 1226
Score = 85.1 bits (209), Expect = 3e-15 Identities = 41/72 (56%), Positives = 56/72 (77%) Frame = -1
Query: 569 YARIEWEVLTLHVERKGVPFRELLETLTLYKIGSRGLELAVRIEREKQIQKIYKAGATMK 390 Y I++EV HV KG+PFR LETL LYKIGS+GL L++RIEREKQ+++I++ GA + Sbjct: 1109 YRFIQYEVYNFHVYGKGIPFRNFLETLVLYKIGSQGLILSLRIEREKQLKQIFRNGAAIV 1168
Query: 389 IQAAVRGFLVRR 354 IQ+ +R FLV+R Sbjct: 1169 IQSHIRRFLVQR 1180
>tr|A4RQQ5|A4RQQ5_OSTLU VIC family transporter: calcium ion channel OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_13647 PE=3 SV=1 Length = 1546
Score = 63.5 bits (153), Expect = 8e-09 Identities = 30/77 (38%), Positives = 49/77 (63%) Frame = -1
Query: 584 AAPQWYARIEWEVLTLHVERKGVPFRELLETLTLYKIGSRGLELAVRIEREKQIQKIYKA 405 AA W RI +E +++HV +G+PF LLE+L K+G+ L LA R+ R+K+++ + Sbjct: 1455 AAALWRRRIMYESISIHVPGRGIPFTPLLESLLATKLGAAALSLAERLARQKRLRDVEAW 1514
Query: 404 GATMKIQAAVRGFLVRR 354 GA + Q+ +RG + RR Sbjct: 1515 GAAVVAQSYIRGHITRR 1531
>tr|Q01GU7|Q01GU7_OSTTA Sodium channel (ISS) OS=Ostreococcus tauri GN=Ot01g01360 PE=3 SV=1 Length = 1485
Score = 61.2 bits (147), Expect = 4e-08 Identities = 34/90 (37%), Positives = 54/90 (60%) Frame = -1
Query: 587 NAAPQWYARIEWEVLTLHVERKGVPFRELLETLTLYKIGSRGLELAVRIEREKQIQKIYK 408 +AA W RI +E + + +GVPF +LLE+L K+G+ L L R+ R ++++ I Sbjct: 1374 HAASLWRRRIAYEAIVVREPGRGVPFTQLLESLLATKLGASALALEARLTRRRRLRDIDH 1433
Query: 407 AGATMKIQAAVRGFLVRRHQAKESKSGMKA 318 A + QA VRGF+VRR + + +S +KA Sbjct: 1434 WAAAVVTQAHVRGFIVRR-RLRIERSRLKA 1462
>tr|A4HTB9|A4HTB9_LEIIN Putative uncharacterized protein OS=Leishmania infantum GN=LinJ07.1000 PE=4 SV=1 Length = 2034
Score = 35.8 bits (81), Expect = 1.9 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +2
Query: 41 RKVMYKALSILQWSSLLRNLVYKAIIHNFG*LGLPQMIWLCYIYIVLP*KVKD 199 ++V+++A SS LR + A+ H G LP M+W +Y +LP +KD Sbjct: 1432 QEVVWRASGAAGVSSALRYFQHAAVAHRVGRAALPVMMWSWQLYSLLPVVIKD 1484
>tr|Q2TXH6|Q2TXH6_ASPOR Predicted protein OS=Aspergillus oryzae GN=AO090010000140 PE=4 SV=1 Length = 284
Score = 35.4 bits (80), Expect = 2.4 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = -1
Query: 272 RH-KSSVMQWNENVSCK-KWVGNFISNPSPFKVKQCKCNKARSSGANQASQNCVL*PCKL 99 RH K WN + CK KW GN+ SN + + +CKC K N+A ++C P Sbjct: 108 RHCKPGDWDWN-SCRCKGKWCGNYDSNCNNWSWNKCKCKKV----CNEADRHCK--PGDW 160
Query: 98 SF*AMRTTAKWKG 60 + + R KW G Sbjct: 161 DWNSCRCKGKWCG 173
Score = 33.9 bits (76), Expect = 7.1 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -1
Query: 272 RH-KSSVMQWNENVSCK-KWVGNFISNPSPFKVKQCKCNKARSSGANQASQNCVL*PCKL 99 RH K WN + CK KW GN+ SN + + +CKC K N+A +C P Sbjct: 153 RHCKPGDWDWN-SCRCKGKWCGNYDSNCNNWSWNKCKCKKV----CNEADCHCK--PSDC 205
Query: 98 SF*AMRTTAKWKG 60 + + R +W G Sbjct: 206 DWNSCRCKGRWCG 218
>tr|B8NVM6|B8NVM6_ASPFL Putative uncharacterized protein OS=Aspergillus flavus NRRL3357 GN=AFLA_117130 PE=4 SV=1 Length = 284
Score = 35.4 bits (80), Expect = 2.4 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = -1
Query: 272 RH-KSSVMQWNENVSCK-KWVGNFISNPSPFKVKQCKCNKARSSGANQASQNCVL*PCKL 99 RH K WN + CK KW GN+ SN + + +CKC K N+A ++C P Sbjct: 108 RHCKPGDWDWN-SCRCKGKWCGNYDSNCNNWSWNKCKCKKV----CNEADRHCK--PGDW 160
Query: 98 SF*AMRTTAKWKG 60 + + R KW G Sbjct: 161 DWNSCRCKGKWCG 173
Score = 35.0 bits (79), Expect = 3.2 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = -1
Query: 272 RH-KSSVMQWNENVSCK-KWVGNFISNPSPFKVKQCKCNKARSSGANQASQNCVL*PCKL 99 RH K WN + CK KW GN+ SN + + +CKC K N+A ++C P Sbjct: 153 RHCKPGDWDWN-SCRCKGKWCGNYDSNCNNWSWNKCKCKKV----CNEADRHCK--PSDW 205
Query: 98 SF*AMRTTAKWKG 60 + + R +W G Sbjct: 206 DWNSCRCKGRWCG 218
>tr|Q0PAQ6|Q0PAQ6_CAMJE Putative acyltransferase family protein OS=Campylobacter jejuni GN=Cj0611c PE=4 SV=1 Length = 458
Score = 35.0 bits (79), Expect = 3.2 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = +1
Query: 61 PFHFAVVLIAQKLSLQGY-NTQFWLAWFAPDDLALLHLHCFTLKGEGLDIKLPTHFLQLT 237 P A +LIA LS + NT ++ W + ++ +H TL L K+P LT Sbjct: 298 PRTVANILIAFILSGMWHGNTLAFIVWGLLHGIGIVFIHLLTLSKFSLQ-KIPALGRFLT 356
Query: 238 FSFHCITLLLCLHSKSMDDIL 300 F F C T + +SK+++D + Sbjct: 357 FQFVCFTWIFFYYSKNLEDAI 377
>tr|A1VYX2|A1VYX2_CAMJJ Alginate O-acetyltransferase AlgI OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=algI PE=4 SV=1 Length = 458
Score = 35.0 bits (79), Expect = 3.2 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = +1
Query: 61 PFHFAVVLIAQKLSLQGY-NTQFWLAWFAPDDLALLHLHCFTLKGEGLDIKLPTHFLQLT 237 P A +LIA LS + NT ++ W + ++ +H TL L K+P LT Sbjct: 298 PRTVANILIAFILSGMWHGNTLAFIVWGLLHGIGIVFIHLLTLSKFSLQ-KIPALGRFLT 356
Query: 238 FSFHCITLLLCLHSKSMDDIL 300 F F C T + +SK+++D + Sbjct: 357 FQFVCFTWIFFYYSKNLEDAI 377
>tr|B1VGH0|B1VGH0_CORU7 DNA primase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=cu1317 PE=4 SV=1 Length = 670
Score = 34.7 bits (78), Expect = 4.1 Identities = 17/36 (47%), Positives = 24/36 (66%) Frame = -1
Query: 569 YARIEWEVLTLHVERKGVPFRELLETLTLYKIGSRG 462 YA + W+ LT H+ RKG F+E LE L ++GS+G Sbjct: 167 YAPLGWDTLTKHLLRKGFEFQE-LEAAGLSRMGSKG 201
>tr|Q8FNH5|Q8FNH5_COREF Putative DNA primase DnaG OS=Corynebacterium efficiens GN=CE2169 PE=4 SV=1 Length = 645
Score = 34.3 bits (77), Expect = 5.4 Identities = 18/36 (50%), Positives = 22/36 (61%) Frame = -1
Query: 569 YARIEWEVLTLHVERKGVPFRELLETLTLYKIGSRG 462 YA W+ LT H+ +KG FRE LE L K+G RG Sbjct: 175 YAPAGWDTLTKHLLKKGFEFRE-LEAAGLSKMGRRG 209
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