BP912455 |
Clone id |
YMU001_000019_G02 |
Library |
YMU01 |
Length |
462 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000019_G02. |
Accession |
BP912455 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3687Contig1 |
Sequence |
CTTTGACAAACAGGTAACTAGTTTCCCAAACCTGAACACCCTAGGCATGTCCTCTGTACA TCCCAAAACACAAGTCAAGAGTTCCATCACACAATGTATCTCACCCACCAGCTTCAACAC TGCCAATGAAGTTTCTTTAAGGAAGGACCACGGCACCACACGCTGTTTGACATTTCTGTG AACAGATAGACAGCGACCTTGTGGAAACTGGGCAAACACCGCTGCAACAGCTCCTCTCAC CATGTCGATGGGTTGGTCTTGTTGCCTTTTCCAACCCCTAAAGCTTCCCATTGCATGTCA ACGGCACGTATACCATCTAGCTCATTGTGCCTGGAATACTGGCACCTATCATATGGAGGC CTTGCCATAGACGTATTTAAGTCAGAGCCCATGGACGCATACTGTAAATTACCAGCCTGA TATCCTAGCACCTCAAGATCCCTTCTGCTGGAACGCACCTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P03365 |
Definition |
sp|P03365|POL_MMTVB Pol polyprotein OS=Mouse mammary tumor virus (strain BR6) |
Align length |
78 |
Score (bit) |
31.6 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A6GB09 |
Definition |
tr|A6GB09|A6GB09_9DELT Serine/threonine kinase family protein OS=Plesiocystis pacifica SIR-1 |
Align length |
55 |
Score (bit) |
35.4 |
E-value |
1.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912455|Adiantum capillus-veneris mRNA, clone: YMU001_000019_G02. (462 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A6GB09|A6GB09_9DELT Serine/threonine kinase family protein OS... 35 1.4 tr|Q18HX5|Q18HX5_HALWD Putative uncharacterized protein OS=Haloq... 34 4.1 tr|A1CFN1|A1CFN1_ASPCL Putative uncharacterized protein OS=Asper... 33 5.4 tr|B0JNV0|B0JNV0_MICAN Ferric uptake regulation protein OS=Micro... 33 7.0 tr|Q6ISY1|Q6ISY1_MICAE Ferric uptake regulator (Fur protein) OS=... 33 7.0 tr|B7JZK5|B7JZK5_SYNP8 Ferric uptake regulator, Fur family OS=Sy... 33 7.0 tr|B4BUX8|B4BUX8_9CHRO Ferric uptake regulator, Fur family OS=Cy... 33 7.0 tr|A8WEV7|A8WEV7_MICAE Fur OS=Microcystis aeruginosa XW01 PE=4 SV=1 33 7.0 tr|B1WQG9|B1WQG9_CYAA5 Ferric uptake regulation protein OS=Cyano... 33 9.1 tr|A3IU10|A3IU10_9CHRO Ferric uptake regulation protein OS=Cyano... 33 9.1
>tr|A6GB09|A6GB09_9DELT Serine/threonine kinase family protein OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_13310 PE=4 SV=1 Length = 499
Score = 35.4 bits (80), Expect = 1.4 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Frame = -3
Query: 298 TCNGKL*GLEKATRPTHRHGERSCCSGVCPVSTRSLSICSQKCQT------ACGA 152 TC G+ G + TRP+ R CC+G+ S R S + C T CGA Sbjct: 443 TCGGRTSGSRRRTRPSRSRSARRCCAGIERWSRRWSSTSRRACSTRRTGPGRCGA 497
>tr|Q18HX5|Q18HX5_HALWD Putative uncharacterized protein OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ2282A PE=4 SV=1 Length = 390
Score = 33.9 bits (76), Expect = 4.1 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = -2
Query: 302 VDMQWEALGVGKGNKTNPSTW*EELLQRCLPSFHKVAVYLFTEMSNSVWCRGPSLKKL 129 VD+ ALG G G+ +P+ W +E ++R +P +AV F S+ R P L L Sbjct: 206 VDLSRGALGFGLGSSLSPADWADESVERQVPDGDPIAV--FETDRRSLLIRAPGLTPL 261
>tr|A1CFN1|A1CFN1_ASPCL Putative uncharacterized protein OS=Aspergillus clavatus GN=ACLA_093790 PE=4 SV=1 Length = 434
Score = 33.5 bits (75), Expect = 5.4 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +2
Query: 158 TRCLTFL*TDRQRPCGNWANTAATAPLTMSMGWSCCLFQPLKLPIACQRHVYHLAHCAWN 337 TR +F+ D P NWA A P + M ++ + +P A H YH W Sbjct: 85 TRLPSFIQNDILNPYINWAKRVARFPTDVVMVTHLLIYMTISVPSAIWLHYYHF---TWG 141
Query: 338 TGTYH 352 G H Sbjct: 142 HGLLH 146
>tr|B0JNV0|B0JNV0_MICAN Ferric uptake regulation protein OS=Microcystis aeruginosa (strain NIES-843) GN=fur PE=4 SV=1 Length = 183
Score = 33.1 bits (74), Expect = 7.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1
Query: 25 PKPEHPRHVLCTSQNTSQEFHHTMYLTHQLQHCQ*SFFKEG 147 P P H H++C N + EF++ L H L+ C+ KEG Sbjct: 91 PYPHHHHHLVCIQCNKTIEFNNDSILKHSLKQCE----KEG 127
>tr|Q6ISY1|Q6ISY1_MICAE Ferric uptake regulator (Fur protein) OS=Microcystis aeruginosa PCC 7806 GN=fur PE=4 SV=1 Length = 183
Score = 33.1 bits (74), Expect = 7.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1
Query: 25 PKPEHPRHVLCTSQNTSQEFHHTMYLTHQLQHCQ*SFFKEG 147 P P H H++C N + EF++ L H L+ C+ KEG Sbjct: 91 PYPHHHHHLVCIQCNKTIEFNNDSILKHSLKQCE----KEG 127
>tr|B7JZK5|B7JZK5_SYNP8 Ferric uptake regulator, Fur family OS=Synechococcus sp. (strain PCC 8801 / RF-1) GN=PCC8801_0870 PE=4 SV=1 Length = 169
Score = 33.1 bits (74), Expect = 7.0 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1
Query: 25 PKPEHPRHVLCTSQNTSQEFHHTMYLTHQLQHCQ*SFFKEG 147 P P H H++C N + EF + L H L+ C+ KEG Sbjct: 91 PSPNHHHHMVCIQCNKTIEFKNDSILKHSLKQCE----KEG 127
>tr|B4BUX8|B4BUX8_9CHRO Ferric uptake regulator, Fur family OS=Cyanothece sp. PCC 8802 GN=Cyan8802DRAFT_0595 PE=4 SV=1 Length = 169
Score = 33.1 bits (74), Expect = 7.0 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1
Query: 25 PKPEHPRHVLCTSQNTSQEFHHTMYLTHQLQHCQ*SFFKEG 147 P P H H++C N + EF + L H L+ C+ KEG Sbjct: 91 PSPNHHHHMVCIQCNKTIEFKNDSILKHSLKQCE----KEG 127
>tr|A8WEV7|A8WEV7_MICAE Fur OS=Microcystis aeruginosa XW01 PE=4 SV=1 Length = 183
Score = 33.1 bits (74), Expect = 7.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1
Query: 25 PKPEHPRHVLCTSQNTSQEFHHTMYLTHQLQHCQ*SFFKEG 147 P P H H++C N + EF++ L H L+ C+ KEG Sbjct: 91 PYPHHHHHLVCIQCNKTIEFNNDSILKHSLKQCE----KEG 127
>tr|B1WQG9|B1WQG9_CYAA5 Ferric uptake regulation protein OS=Cyanothece (strain ATCC 51142) GN=fur1 PE=4 SV=1 Length = 177
Score = 32.7 bits (73), Expect = 9.1 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1
Query: 25 PKPEHPRHVLCTSQNTSQEFHHTMYLTHQLQHCQ*SFFKEG 147 P P H H++C N + EF + L H L+ C KEG Sbjct: 91 PHPNHHHHMVCIQCNKTTEFKNDSILKHSLKQCD----KEG 127
>tr|A3IU10|A3IU10_9CHRO Ferric uptake regulation protein OS=Cyanothece sp. CCY 0110 GN=CY0110_20615 PE=4 SV=1 Length = 179
Score = 32.7 bits (73), Expect = 9.1 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1
Query: 25 PKPEHPRHVLCTSQNTSQEFHHTMYLTHQLQHCQ*SFFKEG 147 P P H H++C N + EF + L H L+ C KEG Sbjct: 91 PHPNHHHHMVCIQCNKTTEFKNDSILKHSLKQCD----KEG 127
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