BP912460 |
Clone id |
YMU001_000019_G07 |
Library |
YMU01 |
Length |
351 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000019_G07. |
Accession |
BP912460 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1236Contig1 |
Sequence |
CTCTTCAGTGAAGTCACCAATACACTGCTTCGAAACTCTGGATGCACCAATGCGATCCTC CAACCAGTACCTGAAATAGTAATCAGAAGTCGCCATAATTACATTTGCAAGATGGTCTTG TTTGCTGATCTTGACAAAGAAATCTAGGAAGCTTAGCAGCGCCTTCTGACTAGTCTCATC ACTTTGCCAGCGCTGCAAAGCATTGGCCTCATCTAAGATAACTGTAGGCACTTTAGTAGT ACCTGCCTTGCGCTTTGTCAAATAGTCCGCCATCGCTTGGTGGAATTCAACGGTGTCCTT CTTGTAGAGCTCAATGCTCAGCATATTCCACTCAAACTTCAACTGCACATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UZE8 |
Definition |
sp|Q9UZE8|Y1200_PYRAB Uncharacterized ATP-binding protein PYRAB12000 OS=Pyrococcus abyssi |
Align length |
54 |
Score (bit) |
38.5 |
E-value |
0.01 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912460|Adiantum capillus-veneris mRNA, clone: YMU001_000019_G07. (351 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9UZE8|Y1200_PYRAB Uncharacterized ATP-binding protein PYRAB1... 39 0.010 sp|Q9V050|Y948_PYRAB Uncharacterized ATP-binding protein PYRAB09... 36 0.051 sp|Q60388|Y075_METJA Uncharacterized ATP-binding protein MJ0075 ... 34 0.20 sp|Q58476|Y1076_METJA Uncharacterized ATP-binding protein MJ1076... 33 0.33 sp|Q58042|Y625_METJA Uncharacterized ATP-binding protein MJ0625 ... 33 0.57 sp|Q60285|Y3526_METJA Uncharacterized ATP-binding protein MJECL2... 33 0.57 sp|Q59053|Y1659_METJA Uncharacterized ATP-binding protein MJ1659... 32 0.74 sp|O24474|TPSD2_ABIGR Myrcene synthase, chloroplastic OS=Abies g... 32 0.74 sp|O58276|Y541_PYRHO Uncharacterized ATP-binding protein PH0541 ... 32 0.97 sp|Q58412|Y1006_METJA Uncharacterized ATP-binding protein MJ1006... 32 0.97 sp|Q58697|Y1301_METJA Uncharacterized ATP-binding protein MJ1301... 32 1.3 sp|Q58416|Y1010_METJA Uncharacterized ATP-binding protein MJ1010... 32 1.3 sp|Q57881|Y439_METJA Uncharacterized ATP-binding protein MJ0439 ... 31 2.2 sp|Q58049|Y632_METJA Uncharacterized ATP-binding protein MJ0632 ... 30 3.7 sp|Q60380|Y074_METJA Uncharacterized ATP-binding protein MJ0074 ... 30 3.7 sp|Q9V103|Y626_PYRAB Uncharacterized ATP-binding protein PYRAB06... 30 4.8 sp|Q980G6|THII_SULSO Probable thiamine biosynthesis protein thiI... 30 4.8 sp|Q8SM04|MATK_PENHE Maturase K OS=Penstemon heterophyllus GN=ma... 29 8.2
>sp|Q9UZE8|Y1200_PYRAB Uncharacterized ATP-binding protein PYRAB12000 OS=Pyrococcus abyssi GN=PYRAB12000 PE=3 SV=1 Length = 326
Score = 38.5 bits (88), Expect = 0.010 Identities = 19/54 (35%), Positives = 33/54 (61%) Frame = -1
Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSDYYF 73 ++P +ILDE + + D+ + +FFV+++K+ HLA+V +ATSD F Sbjct: 118 RIPVLILDELQVIGDLRIDDL---LIYKLFNFFVRLTKELHLAHVFVATSDSLF 168
>sp|Q9V050|Y948_PYRAB Uncharacterized ATP-binding protein PYRAB09480 OS=Pyrococcus abyssi GN=PYRAB09480 PE=3 SV=1 Length = 339
Score = 36.2 bits (82), Expect = 0.051 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = -1
Query: 252 RKAGTTKVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSDYYF 73 RKAG K P +ILDE + + D + + +FF+ ++K+ HL++V + TSD F Sbjct: 131 RKAG--KRPILILDELQVIGDLKVDGS---LIYELFNFFIHLTKESHLSHVFVVTSDSLF 185
>sp|Q60388|Y075_METJA Uncharacterized ATP-binding protein MJ0075 OS=Methanocaldococcus jannaschii GN=MJ0075 PE=3 SV=1 Length = 365
Score = 34.3 bits (77), Expect = 0.20 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = -1
Query: 228 PTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSDYYFRYWLEDRI 49 P +I+DE LQR + +++ + + +FFV+++K+ H+ + +SD F ++ DR Sbjct: 150 PVIIIDE---LQRLKGLKSNGELIDDLFNFFVRLTKELHITHCFCLSSDSLFIEYVYDRA 206
Query: 48 G-ASRVSKQCIGDFTEE 1 R + DF +E Sbjct: 207 ELRGRADYILVDDFDKE 223
>sp|Q58476|Y1076_METJA Uncharacterized ATP-binding protein MJ1076 OS=Methanocaldococcus jannaschii GN=MJ1076 PE=3 SV=1 Length = 337
Score = 33.5 bits (75), Expect = 0.33 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = -1
Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFL-DFFVKISKQDHLANVIMATSDYYF 73 K P +++DE L+ + S K+LL+ L + FV ++K +HL +VI TSD F Sbjct: 127 KRPVLVIDELQKLKNIYFN--SGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLF 179
>sp|Q58042|Y625_METJA Uncharacterized ATP-binding protein MJ0625 OS=Methanocaldococcus jannaschii GN=MJ0625 PE=3 SV=1 Length = 336
Score = 32.7 bits (73), Expect = 0.57 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = -1
Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFL-DFFVKISKQDHLANVIMATSDYYF 73 K P +I+DE L+ + K+LL+ L + FV ++K +HL +VI TSD F Sbjct: 127 KKPVLIIDELQKLKNIYFN--GGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLF 179
>sp|Q60285|Y3526_METJA Uncharacterized ATP-binding protein MJECL26 OS=Methanocaldococcus jannaschii GN=MJECL26 PE=3 SV=1 Length = 343
Score = 32.7 bits (73), Expect = 0.57 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = -1
Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFL-DFFVKISKQDHLANVIMATSDYYF 73 K P +I+DE L+ + K+LL+ L + FV ++K +HL +VI TSD F Sbjct: 131 KKPVLIIDELQKLKNIYFN--GGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLF 183
>sp|Q59053|Y1659_METJA Uncharacterized ATP-binding protein MJ1659 OS=Methanocaldococcus jannaschii GN=MJ1659 PE=3 SV=1 Length = 361
Score = 32.3 bits (72), Expect = 0.74 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Frame = -1
Query: 267 DYLTK-----RKAGTTKVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLAN 103 +YLTK +K G K P +I+DE LQ+ + + + +FF+ ++K+ HL + Sbjct: 136 EYLTKIFEDIKKKG--KQPILIIDE---LQKIGDLKINGFLIYELFNFFIDLTKEKHLCH 190
Query: 102 VIMATSDYYF 73 V+ +SD F Sbjct: 191 VLCLSSDSLF 200
>sp|O24474|TPSD2_ABIGR Myrcene synthase, chloroplastic OS=Abies grandis GN=ag2 PE=1 SV=1 Length = 627
Score = 32.3 bits (72), Expect = 0.74 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1
Query: 156 LSFLDFFVKISKQDHLANVIMATSDYYFRYWLEDRIGASRVS 31 L +D ++ H N I + DY FRYW E+ IG R S Sbjct: 127 LWIVDSVERLGIARHFKNEITSALDYVFRYWEENGIGCGRDS 168
>sp|O58276|Y541_PYRHO Uncharacterized ATP-binding protein PH0541 OS=Pyrococcus horikoshii GN=PH0541 PE=3 SV=1 Length = 321
Score = 32.0 bits (71), Expect = 0.97 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = -1
Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSDYYF 73 K+P ++ DE LQ + + + + +F + +SK+ HLA+V TSD F Sbjct: 130 KMPILVFDE---LQVIKDLKVNGSLIYQLFNFLIHLSKEAHLAHVFAVTSDSLF 180
>sp|Q58412|Y1006_METJA Uncharacterized ATP-binding protein MJ1006 OS=Methanocaldococcus jannaschii GN=MJ1006 PE=3 SV=1 Length = 359
Score = 32.0 bits (71), Expect = 0.97 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Frame = -1
Query: 234 KVPTVILDEANALQR--WQSDETSQKALLSFL-DFFVKISKQDHLANVIMATSDYYF 73 K P +I+DE L+ + + K+LL+ L + FV ++K HL +VI TSD F Sbjct: 145 KKPILIIDELQKLKSIYFNGEGKGDKSLLNELFNLFVHLTKVRHLCHVICLTSDTLF 201
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6C3N2 |
Definition |
tr|Q6C3N2|Q6C3N2_YARLI YALI0E33429p OS=Yarrowia lipolytica |
Align length |
109 |
Score (bit) |
51.2 |
E-value |
2.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912460|Adiantum capillus-veneris mRNA, clone: YMU001_000019_G07. (351 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6C3N2|Q6C3N2_YARLI YALI0E33429p OS=Yarrowia lipolytica GN=YA... 51 2e-05 tr|A8P0K0|A8P0K0_COPC7 Putative uncharacterized protein OS=Copri... 41 0.026 tr|A0EA00|A0EA00_PARTE Chromosome undetermined scaffold_85, whol... 35 1.8 tr|Q0PC78|Q0PC78_CAMJE Putative uncharacterized protein OS=Campy... 35 2.4 tr|A1VXD9|A1VXD9_CAMJJ Putative uncharacterized protein OS=Campy... 35 2.4 tr|Q4HEI2|Q4HEI2_CAMCO Putative uncharacterized protein OS=Campy... 35 2.4 tr|A3ZKQ0|A3ZKQ0_CAMJE Putative uncharacterized protein OS=Campy... 35 2.4 tr|A3ZFM8|A3ZFM8_CAMJE Putative uncharacterized protein OS=Campy... 35 2.4 tr|A3YKW2|A3YKW2_CAMJE Putative uncharacterized protein OS=Campy... 35 2.4 tr|B8IS78|B8IS78_METNO DNA-directed RNA polymerase, beta subunit... 34 4.1 tr|Q8IAN6|Q8IAN6_PLAF7 Putative uncharacterized protein MAL8P1.1... 34 4.1 tr|A7RUX2|A7RUX2_NEMVE Predicted protein OS=Nematostella vectens... 34 4.1 tr|Q3K5B3|Q3K5B3_PSEPF CheA Signal Transduction Histidine Kinase... 33 7.0 tr|B0DX92|B0DX92_LACBS Predicted protein OS=Laccaria bicolor (st... 33 7.0 tr|A5EW14|A5EW14_DICNV Exopolyphosphatase OS=Dichelobacter nodos... 33 9.1
>tr|Q6C3N2|Q6C3N2_YARLI YALI0E33429p OS=Yarrowia lipolytica GN=YALI0E33429g PE=4 SV=1 Length = 650
Score = 51.2 bits (121), Expect = 2e-05 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Frame = -1
Query: 345 QLKFEWNMLSIELYKKDTVEFHQAMADYLTKRKA---GTTKVPTVILDEANALQRWQSDE 175 Q+K L++++ +D E + D + +R G+ +VP I DEA+ L DE Sbjct: 295 QVKDNGGKLALKMLDQD--ELLRKTKDEIARRSGLTMGSKRVPVFIFDEAHRLPTLIDDE 352
Query: 174 TSQKALLSFLDFFVKISKQDHLANVIMATSDYYFRYWLEDRIGASRVSK 28 K LL D F+ ++KQD L +VI TSD ++ WL I S+ SK Sbjct: 353 DCLKTLL---DSFLVLTKQDRLCHVIQCTSDAFYMLWLR-AINVSQHSK 397
>tr|A8P0K0|A8P0K0_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_10330 PE=4 SV=1 Length = 831
Score = 41.2 bits (95), Expect = 0.026 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = -1
Query: 261 LTKRKAGTTKVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSD 82 L +RK +VP + DEA+ L S + + + LD + ++KQD L +V+ ATSD Sbjct: 281 LNRRK----RVPVIFFDEAHKLPHLIP---SAQTMQTILDSTLVLTKQDRLCHVVHATSD 333
Query: 81 YYFRYWLEDRIGASRVSKQ-CIGDFTE 4 +++ WL R+G K IGD ++ Sbjct: 334 PFYQGWL-SRVGVLWYCKMIAIGDLSK 359
>tr|A0EA00|A0EA00_PARTE Chromosome undetermined scaffold_85, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00024848001 PE=4 SV=1 Length = 888
Score = 35.0 bits (79), Expect = 1.8 Identities = 26/107 (24%), Positives = 44/107 (41%) Frame = -1
Query: 339 KFEWNMLSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDETSQKA 160 K E + L ELY + + +Y+ K V+ E N +R D ++ Sbjct: 367 KDEQDRLFAELYVFMMEQMQTTLGEYIQNNKEDDIHEDLVLTFEQNIRER---DRVFKRL 423
Query: 159 LLSFLDFFVKISKQDHLANVIMATSDYYFRYWLEDRIGASRVSKQCI 19 S L+ F +++K+ N + YY L D+ AS +K C+ Sbjct: 424 KESQLEKFQRLAKEYETINQVSQALKYYTNMVLVDKTSASAFAKYCL 470
>tr|Q0PC78|Q0PC78_CAMJE Putative uncharacterized protein OS=Campylobacter jejuni GN=Cj0055c PE=4 SV=1 Length = 274
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = -1
Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172 KFE+N L + KKD EF+ M K K P + D A +W D T Sbjct: 60 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 115
Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70 ++K +L F FV SK HL I+ +D +++ Sbjct: 116 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 146
>tr|A1VXD9|A1VXD9_CAMJJ Putative uncharacterized protein OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=CJJ81176_0092 PE=4 SV=1 Length = 262
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = -1
Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172 KFE+N L + KKD EF+ M K K P + D A +W D T Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103
Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70 ++K +L F FV SK HL I+ +D +++ Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134
>tr|Q4HEI2|Q4HEI2_CAMCO Putative uncharacterized protein OS=Campylobacter coli RM2228 GN=CCO0090 PE=4 SV=1 Length = 262
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = -1
Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172 KFE+N L + KKD EF+ M K K P + D A +W D T Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103
Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70 ++K +L F FV SK HL I+ +D +++ Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134
>tr|A3ZKQ0|A3ZKQ0_CAMJE Putative uncharacterized protein OS=Campylobacter jejuni subsp. jejuni 84-25 GN=CJJ8425_0086 PE=4 SV=1 Length = 262
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = -1
Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172 KFE+N L + KKD EF+ M K K P + D A +W D T Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103
Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70 ++K +L F FV SK HL I+ +D +++ Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134
>tr|A3ZFM8|A3ZFM8_CAMJE Putative uncharacterized protein OS=Campylobacter jejuni subsp. jejuni HB93-13 GN=CJJHB9313_0073 PE=4 SV=1 Length = 262
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = -1
Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172 KFE+N L + KKD EF+ M K K P + D A +W D T Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103
Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70 ++K +L F FV SK HL I+ +D +++ Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134
>tr|A3YKW2|A3YKW2_CAMJE Putative uncharacterized protein OS=Campylobacter jejuni subsp. jejuni CF93-6 GN=CJJCF936_0079 PE=4 SV=1 Length = 262
Score = 34.7 bits (78), Expect = 2.4 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Frame = -1
Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172 KFE+N L + KKD EF+ M K K P + D A +W D T Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103
Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70 ++K +L F FV SK HL I+ +D +++ Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134
>tr|B8IS78|B8IS78_METNO DNA-directed RNA polymerase, beta subunit OS=Methylobacterium nodulans ORS 2060 GN=Mnod_1901 PE=4 SV=1 Length = 1374
Score = 33.9 bits (76), Expect = 4.1 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = -1
Query: 306 YKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDETSQKALLSFLDFFVKI 127 +KKDTV + +ADY + V ++ E A+Q+ Q DE+ ++ FLD K+ Sbjct: 998 FKKDTVLTREGLADYPRSQWWQFAVVDDRLMTEIEAMQK-QYDESKKRLEQRFLDKVEKL 1056
Query: 126 SKQDHLANVIM 94 + D L +M Sbjct: 1057 QRGDELPPGVM 1067
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