BP912460
Clone id YMU001_000019_G07
Library
Length 351
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000019_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTCTTCAGTGAAGTCACCAATACACTGCTTCGAAACTCTGGATGCACCAATGCGATCCTC
CAACCAGTACCTGAAATAGTAATCAGAAGTCGCCATAATTACATTTGCAAGATGGTCTTG
TTTGCTGATCTTGACAAAGAAATCTAGGAAGCTTAGCAGCGCCTTCTGACTAGTCTCATC
ACTTTGCCAGCGCTGCAAAGCATTGGCCTCATCTAAGATAACTGTAGGCACTTTAGTAGT
ACCTGCCTTGCGCTTTGTCAAATAGTCCGCCATCGCTTGGTGGAATTCAACGGTGTCCTT
CTTGTAGAGCTCAATGCTCAGCATATTCCACTCAAACTTCAACTGCACATT
■■Homology search results ■■ -
sp_hit_id Q9UZE8
Definition sp|Q9UZE8|Y1200_PYRAB Uncharacterized ATP-binding protein PYRAB12000 OS=Pyrococcus abyssi
Align length 54
Score (bit) 38.5
E-value 0.01
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912460|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_G07.
(351 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UZE8|Y1200_PYRAB Uncharacterized ATP-binding protein PYRAB1... 39 0.010
sp|Q9V050|Y948_PYRAB Uncharacterized ATP-binding protein PYRAB09... 36 0.051
sp|Q60388|Y075_METJA Uncharacterized ATP-binding protein MJ0075 ... 34 0.20
sp|Q58476|Y1076_METJA Uncharacterized ATP-binding protein MJ1076... 33 0.33
sp|Q58042|Y625_METJA Uncharacterized ATP-binding protein MJ0625 ... 33 0.57
sp|Q60285|Y3526_METJA Uncharacterized ATP-binding protein MJECL2... 33 0.57
sp|Q59053|Y1659_METJA Uncharacterized ATP-binding protein MJ1659... 32 0.74
sp|O24474|TPSD2_ABIGR Myrcene synthase, chloroplastic OS=Abies g... 32 0.74
sp|O58276|Y541_PYRHO Uncharacterized ATP-binding protein PH0541 ... 32 0.97
sp|Q58412|Y1006_METJA Uncharacterized ATP-binding protein MJ1006... 32 0.97
sp|Q58697|Y1301_METJA Uncharacterized ATP-binding protein MJ1301... 32 1.3
sp|Q58416|Y1010_METJA Uncharacterized ATP-binding protein MJ1010... 32 1.3
sp|Q57881|Y439_METJA Uncharacterized ATP-binding protein MJ0439 ... 31 2.2
sp|Q58049|Y632_METJA Uncharacterized ATP-binding protein MJ0632 ... 30 3.7
sp|Q60380|Y074_METJA Uncharacterized ATP-binding protein MJ0074 ... 30 3.7
sp|Q9V103|Y626_PYRAB Uncharacterized ATP-binding protein PYRAB06... 30 4.8
sp|Q980G6|THII_SULSO Probable thiamine biosynthesis protein thiI... 30 4.8
sp|Q8SM04|MATK_PENHE Maturase K OS=Penstemon heterophyllus GN=ma... 29 8.2

>sp|Q9UZE8|Y1200_PYRAB Uncharacterized ATP-binding protein
PYRAB12000 OS=Pyrococcus abyssi GN=PYRAB12000 PE=3 SV=1
Length = 326

Score = 38.5 bits (88), Expect = 0.010
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = -1

Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSDYYF 73
++P +ILDE + + D+ + +FFV+++K+ HLA+V +ATSD F
Sbjct: 118 RIPVLILDELQVIGDLRIDDL---LIYKLFNFFVRLTKELHLAHVFVATSDSLF 168


>sp|Q9V050|Y948_PYRAB Uncharacterized ATP-binding protein PYRAB09480
OS=Pyrococcus abyssi GN=PYRAB09480 PE=3 SV=1
Length = 339

Score = 36.2 bits (82), Expect = 0.051
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = -1

Query: 252 RKAGTTKVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSDYYF 73
RKAG K P +ILDE + + D + + +FF+ ++K+ HL++V + TSD F
Sbjct: 131 RKAG--KRPILILDELQVIGDLKVDGS---LIYELFNFFIHLTKESHLSHVFVVTSDSLF 185


>sp|Q60388|Y075_METJA Uncharacterized ATP-binding protein MJ0075
OS=Methanocaldococcus jannaschii GN=MJ0075 PE=3 SV=1
Length = 365

Score = 34.3 bits (77), Expect = 0.20
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -1

Query: 228 PTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSDYYFRYWLEDRI 49
P +I+DE LQR + +++ + + +FFV+++K+ H+ + +SD F ++ DR
Sbjct: 150 PVIIIDE---LQRLKGLKSNGELIDDLFNFFVRLTKELHITHCFCLSSDSLFIEYVYDRA 206

Query: 48 G-ASRVSKQCIGDFTEE 1
R + DF +E
Sbjct: 207 ELRGRADYILVDDFDKE 223


>sp|Q58476|Y1076_METJA Uncharacterized ATP-binding protein MJ1076
OS=Methanocaldococcus jannaschii GN=MJ1076 PE=3 SV=1
Length = 337

Score = 33.5 bits (75), Expect = 0.33
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = -1

Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFL-DFFVKISKQDHLANVIMATSDYYF 73
K P +++DE L+ + S K+LL+ L + FV ++K +HL +VI TSD F
Sbjct: 127 KRPVLVIDELQKLKNIYFN--SGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLF 179


>sp|Q58042|Y625_METJA Uncharacterized ATP-binding protein MJ0625
OS=Methanocaldococcus jannaschii GN=MJ0625 PE=3 SV=1
Length = 336

Score = 32.7 bits (73), Expect = 0.57
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -1

Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFL-DFFVKISKQDHLANVIMATSDYYF 73
K P +I+DE L+ + K+LL+ L + FV ++K +HL +VI TSD F
Sbjct: 127 KKPVLIIDELQKLKNIYFN--GGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLF 179


>sp|Q60285|Y3526_METJA Uncharacterized ATP-binding protein MJECL26
OS=Methanocaldococcus jannaschii GN=MJECL26 PE=3 SV=1
Length = 343

Score = 32.7 bits (73), Expect = 0.57
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -1

Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFL-DFFVKISKQDHLANVIMATSDYYF 73
K P +I+DE L+ + K+LL+ L + FV ++K +HL +VI TSD F
Sbjct: 131 KKPVLIIDELQKLKNIYFN--GGKSLLNELFNLFVSLTKMEHLCHVICLTSDTLF 183


>sp|Q59053|Y1659_METJA Uncharacterized ATP-binding protein MJ1659
OS=Methanocaldococcus jannaschii GN=MJ1659 PE=3 SV=1
Length = 361

Score = 32.3 bits (72), Expect = 0.74
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -1

Query: 267 DYLTK-----RKAGTTKVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLAN 103
+YLTK +K G K P +I+DE LQ+ + + + +FF+ ++K+ HL +
Sbjct: 136 EYLTKIFEDIKKKG--KQPILIIDE---LQKIGDLKINGFLIYELFNFFIDLTKEKHLCH 190

Query: 102 VIMATSDYYF 73
V+ +SD F
Sbjct: 191 VLCLSSDSLF 200


>sp|O24474|TPSD2_ABIGR Myrcene synthase, chloroplastic OS=Abies
grandis GN=ag2 PE=1 SV=1
Length = 627

Score = 32.3 bits (72), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1

Query: 156 LSFLDFFVKISKQDHLANVIMATSDYYFRYWLEDRIGASRVS 31
L +D ++ H N I + DY FRYW E+ IG R S
Sbjct: 127 LWIVDSVERLGIARHFKNEITSALDYVFRYWEENGIGCGRDS 168


>sp|O58276|Y541_PYRHO Uncharacterized ATP-binding protein PH0541
OS=Pyrococcus horikoshii GN=PH0541 PE=3 SV=1
Length = 321

Score = 32.0 bits (71), Expect = 0.97
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -1

Query: 234 KVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSDYYF 73
K+P ++ DE LQ + + + + +F + +SK+ HLA+V TSD F
Sbjct: 130 KMPILVFDE---LQVIKDLKVNGSLIYQLFNFLIHLSKEAHLAHVFAVTSDSLF 180


>sp|Q58412|Y1006_METJA Uncharacterized ATP-binding protein MJ1006
OS=Methanocaldococcus jannaschii GN=MJ1006 PE=3 SV=1
Length = 359

Score = 32.0 bits (71), Expect = 0.97
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = -1

Query: 234 KVPTVILDEANALQR--WQSDETSQKALLSFL-DFFVKISKQDHLANVIMATSDYYF 73
K P +I+DE L+ + + K+LL+ L + FV ++K HL +VI TSD F
Sbjct: 145 KKPILIIDELQKLKSIYFNGEGKGDKSLLNELFNLFVHLTKVRHLCHVICLTSDTLF 201


tr_hit_id Q6C3N2
Definition tr|Q6C3N2|Q6C3N2_YARLI YALI0E33429p OS=Yarrowia lipolytica
Align length 109
Score (bit) 51.2
E-value 2.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912460|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_G07.
(351 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6C3N2|Q6C3N2_YARLI YALI0E33429p OS=Yarrowia lipolytica GN=YA... 51 2e-05
tr|A8P0K0|A8P0K0_COPC7 Putative uncharacterized protein OS=Copri... 41 0.026
tr|A0EA00|A0EA00_PARTE Chromosome undetermined scaffold_85, whol... 35 1.8
tr|Q0PC78|Q0PC78_CAMJE Putative uncharacterized protein OS=Campy... 35 2.4
tr|A1VXD9|A1VXD9_CAMJJ Putative uncharacterized protein OS=Campy... 35 2.4
tr|Q4HEI2|Q4HEI2_CAMCO Putative uncharacterized protein OS=Campy... 35 2.4
tr|A3ZKQ0|A3ZKQ0_CAMJE Putative uncharacterized protein OS=Campy... 35 2.4
tr|A3ZFM8|A3ZFM8_CAMJE Putative uncharacterized protein OS=Campy... 35 2.4
tr|A3YKW2|A3YKW2_CAMJE Putative uncharacterized protein OS=Campy... 35 2.4
tr|B8IS78|B8IS78_METNO DNA-directed RNA polymerase, beta subunit... 34 4.1
tr|Q8IAN6|Q8IAN6_PLAF7 Putative uncharacterized protein MAL8P1.1... 34 4.1
tr|A7RUX2|A7RUX2_NEMVE Predicted protein OS=Nematostella vectens... 34 4.1
tr|Q3K5B3|Q3K5B3_PSEPF CheA Signal Transduction Histidine Kinase... 33 7.0
tr|B0DX92|B0DX92_LACBS Predicted protein OS=Laccaria bicolor (st... 33 7.0
tr|A5EW14|A5EW14_DICNV Exopolyphosphatase OS=Dichelobacter nodos... 33 9.1

>tr|Q6C3N2|Q6C3N2_YARLI YALI0E33429p OS=Yarrowia lipolytica
GN=YALI0E33429g PE=4 SV=1
Length = 650

Score = 51.2 bits (121), Expect = 2e-05
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = -1

Query: 345 QLKFEWNMLSIELYKKDTVEFHQAMADYLTKRKA---GTTKVPTVILDEANALQRWQSDE 175
Q+K L++++ +D E + D + +R G+ +VP I DEA+ L DE
Sbjct: 295 QVKDNGGKLALKMLDQD--ELLRKTKDEIARRSGLTMGSKRVPVFIFDEAHRLPTLIDDE 352

Query: 174 TSQKALLSFLDFFVKISKQDHLANVIMATSDYYFRYWLEDRIGASRVSK 28
K LL D F+ ++KQD L +VI TSD ++ WL I S+ SK
Sbjct: 353 DCLKTLL---DSFLVLTKQDRLCHVIQCTSDAFYMLWLR-AINVSQHSK 397


>tr|A8P0K0|A8P0K0_COPC7 Putative uncharacterized protein
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=CC1G_10330 PE=4 SV=1
Length = 831

Score = 41.2 bits (95), Expect = 0.026
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = -1

Query: 261 LTKRKAGTTKVPTVILDEANALQRWQSDETSQKALLSFLDFFVKISKQDHLANVIMATSD 82
L +RK +VP + DEA+ L S + + + LD + ++KQD L +V+ ATSD
Sbjct: 281 LNRRK----RVPVIFFDEAHKLPHLIP---SAQTMQTILDSTLVLTKQDRLCHVVHATSD 333

Query: 81 YYFRYWLEDRIGASRVSKQ-CIGDFTE 4
+++ WL R+G K IGD ++
Sbjct: 334 PFYQGWL-SRVGVLWYCKMIAIGDLSK 359


>tr|A0EA00|A0EA00_PARTE Chromosome undetermined scaffold_85, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00024848001 PE=4 SV=1
Length = 888

Score = 35.0 bits (79), Expect = 1.8
Identities = 26/107 (24%), Positives = 44/107 (41%)
Frame = -1

Query: 339 KFEWNMLSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDETSQKA 160
K E + L ELY + + +Y+ K V+ E N +R D ++
Sbjct: 367 KDEQDRLFAELYVFMMEQMQTTLGEYIQNNKEDDIHEDLVLTFEQNIRER---DRVFKRL 423

Query: 159 LLSFLDFFVKISKQDHLANVIMATSDYYFRYWLEDRIGASRVSKQCI 19
S L+ F +++K+ N + YY L D+ AS +K C+
Sbjct: 424 KESQLEKFQRLAKEYETINQVSQALKYYTNMVLVDKTSASAFAKYCL 470


>tr|Q0PC78|Q0PC78_CAMJE Putative uncharacterized protein
OS=Campylobacter jejuni GN=Cj0055c PE=4 SV=1
Length = 274

Score = 34.7 bits (78), Expect = 2.4
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -1

Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172
KFE+N L + KKD EF+ M K K P + D A +W D T
Sbjct: 60 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 115

Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70
++K +L F FV SK HL I+ +D +++
Sbjct: 116 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 146


>tr|A1VXD9|A1VXD9_CAMJJ Putative uncharacterized protein
OS=Campylobacter jejuni subsp. jejuni serotype O:23/36
(strain 81-176) GN=CJJ81176_0092 PE=4 SV=1
Length = 262

Score = 34.7 bits (78), Expect = 2.4
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -1

Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172
KFE+N L + KKD EF+ M K K P + D A +W D T
Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103

Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70
++K +L F FV SK HL I+ +D +++
Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134


>tr|Q4HEI2|Q4HEI2_CAMCO Putative uncharacterized protein
OS=Campylobacter coli RM2228 GN=CCO0090 PE=4 SV=1
Length = 262

Score = 34.7 bits (78), Expect = 2.4
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -1

Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172
KFE+N L + KKD EF+ M K K P + D A +W D T
Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103

Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70
++K +L F FV SK HL I+ +D +++
Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134


>tr|A3ZKQ0|A3ZKQ0_CAMJE Putative uncharacterized protein
OS=Campylobacter jejuni subsp. jejuni 84-25
GN=CJJ8425_0086 PE=4 SV=1
Length = 262

Score = 34.7 bits (78), Expect = 2.4
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -1

Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172
KFE+N L + KKD EF+ M K K P + D A +W D T
Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103

Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70
++K +L F FV SK HL I+ +D +++
Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134


>tr|A3ZFM8|A3ZFM8_CAMJE Putative uncharacterized protein
OS=Campylobacter jejuni subsp. jejuni HB93-13
GN=CJJHB9313_0073 PE=4 SV=1
Length = 262

Score = 34.7 bits (78), Expect = 2.4
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -1

Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172
KFE+N L + KKD EF+ M K K P + D A +W D T
Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103

Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70
++K +L F FV SK HL I+ +D +++
Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134


>tr|A3YKW2|A3YKW2_CAMJE Putative uncharacterized protein
OS=Campylobacter jejuni subsp. jejuni CF93-6
GN=CJJCF936_0079 PE=4 SV=1
Length = 262

Score = 34.7 bits (78), Expect = 2.4
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -1

Query: 339 KFEWNM----LSIELYKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDET 172
KFE+N L + KKD EF+ M K K P + D A +W D T
Sbjct: 48 KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSP--LKDFNPAYTKW--DPT 103

Query: 171 SQKALLSFLDFFVKISKQDHLANVIMATSDYYFR 70
++K +L F FV SK HL I+ +D +++
Sbjct: 104 TEKMMLGF---FVSYSKMFHLGYDIIKKADEFYK 134


>tr|B8IS78|B8IS78_METNO DNA-directed RNA polymerase, beta subunit
OS=Methylobacterium nodulans ORS 2060 GN=Mnod_1901 PE=4
SV=1
Length = 1374

Score = 33.9 bits (76), Expect = 4.1
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = -1

Query: 306 YKKDTVEFHQAMADYLTKRKAGTTKVPTVILDEANALQRWQSDETSQKALLSFLDFFVKI 127
+KKDTV + +ADY + V ++ E A+Q+ Q DE+ ++ FLD K+
Sbjct: 998 FKKDTVLTREGLADYPRSQWWQFAVVDDRLMTEIEAMQK-QYDESKKRLEQRFLDKVEKL 1056

Query: 126 SKQDHLANVIM 94
+ D L +M
Sbjct: 1057 QRGDELPPGVM 1067