| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912464|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_E01.
(396 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q38793|RBS_AEGTA Ribulose bisphosphate carboxylase small chai... 31 1.7
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 31 1.7
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 31 2.2
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 30 2.9
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 30 2.9
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 30 3.7
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 30 3.7
sp|Q6J9G0|STYK1_HUMAN Tyrosine protein-kinase STYK1 OS=Homo sapi... 30 4.9
sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=G... 29 8.3
sp|P12569|FUS_CDVO Fusion glycoprotein F0 OS=Canine distemper vi... 29 8.3
>sp|Q38793|RBS_AEGTA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1
Length = 175
Score = 31.2 bits (69), Expect = 1.7
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 271 GKFLGTVSQKEWAIRCQQVHPLESRKKQTFVDFLSPLSPQVL 396
G LG+VS IRC QV P+E KK + +L PLS + L
Sbjct: 33 GASLGSVSNGG-RIRCMQVWPIEGIKKFETLSYLPPLSTEGL 73
>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
Length = 174
Score = 31.2 bits (69), Expect = 1.7
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 280 LGTVSQKEWAIRCQQVHPLESRKKQTFVDFLSPLSPQVL 396
LG+VS IRC QV P+E KK + +L PLS + L
Sbjct: 35 LGSVSNGG-RIRCMQVWPIEGIKKFETLSYLPPLSTEAL 72
>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
Length = 177
Score = 30.8 bits (68), Expect = 2.2
Identities = 26/84 (30%), Positives = 36/84 (42%)
Frame = +1
Query: 145 SSTAPICRCRLQQTNNIASQRANPIAQPR*SQFM*APGLQPVGKFLGTVSQKEWAIRCQQ 324
+STA + R Q+N +A P R S P + K L T+ + C Q
Sbjct: 7 ASTAAVARAGPAQSNMVA-----PFNGLRSSVAF--PATRKANKNLSTLPSNGGKVSCMQ 59
Query: 325 VHPLESRKKQTFVDFLSPLSPQVL 396
V P E KK + +L PLS + L
Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDL 83
>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 174
Score = 30.4 bits (67), Expect = 2.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 310 IRCQQVHPLESRKKQTFVDFLSPLSPQVL 396
IRC QV P+E KK + +L PLS + L
Sbjct: 44 IRCMQVWPIEGIKKFETLSYLPPLSTEAL 72
>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
Length = 175
Score = 30.4 bits (67), Expect = 2.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 310 IRCQQVHPLESRKKQTFVDFLSPLSPQVL 396
IRC QV P+E KK + +L PLS + L
Sbjct: 45 IRCMQVWPIEGIKKFETLSYLPPLSTEAL 73
>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177
Score = 30.0 bits (66), Expect = 3.7
Identities = 26/84 (30%), Positives = 35/84 (41%)
Frame = +1
Query: 145 SSTAPICRCRLQQTNNIASQRANPIAQPR*SQFM*APGLQPVGKFLGTVSQKEWAIRCQQ 324
+STA + R QTN +A P R S P + L T+ + C Q
Sbjct: 7 ASTAAVARVGPAQTNMVA-----PFNGLRSSVAF--PATRKANNDLSTLPSNGGRVSCMQ 59
Query: 325 VHPLESRKKQTFVDFLSPLSPQVL 396
V P E KK + +L PLS + L
Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDL 83
>sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small chain
SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2
Length = 173
Score = 30.0 bits (66), Expect = 3.7
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +1
Query: 148 STAPICRCRLQQTNNIASQRA--NPIAQPR*SQFM*APGLQPVGKFLGTVSQKEWAIRCQ 321
STA + R R QTN + + + +A P + L T+ + C
Sbjct: 4 STAAVARVRPAQTNMVGAFNGCRSSVA---------FPATRKANNDLSTLPSSGGRVSCM 54
Query: 322 QVHPLESRKKQTFVDFLSPLSPQVL 396
QV P E KK + +L PLS + L
Sbjct: 55 QVWPPEGLKKFETLSYLPPLSVEDL 79
>sp|Q6J9G0|STYK1_HUMAN Tyrosine protein-kinase STYK1 OS=Homo sapiens
GN=STYK1 PE=2 SV=3
Length = 422
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 155 PPYVVVAYNKPTTSLLNVLIR*PSQGRASSCEHQVCNLLASSW 283
PPY V P TS+L L R R SSC H + +++ S W
Sbjct: 325 PPYPEV----PPTSILEHLQRRKIMKRPSSCTHTMYSIMKSCW 363
>sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=Gp5
PE=2 SV=1
Length = 567
Score = 28.9 bits (63), Expect = 8.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -3
Query: 340 ILRGALVGNVLPILFGKPF--PGTCQQVANLVLT*TGSTLAGLSD 212
+LR AL+ VLP+L +PF P TC+ V +G ++A +++
Sbjct: 1 MLRSALLSAVLPLLRAQPFPCPKTCKCVVRDAAQCSGGSVAHIAE 45
>sp|P12569|FUS_CDVO Fusion glycoprotein F0 OS=Canine distemper virus
(strain Onderstepoort) GN=F PE=1 SV=1
Length = 662
Score = 28.9 bits (63), Expect = 8.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 287 VPRNLPTGCKPGAHMNWLYLGWAIGLAR*EAMLLVCCRRQRH 162
+ R P G+H WL L W +G+ A L +C + Q H
Sbjct: 102 IERRQPNAINSGSHCTWLVL-WCLGM----ASLFLCSKAQIH 138
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| Report |
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