BP912468
Clone id YMU001_000019_G11
Library
Length 633
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000019_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAAATTACTAGTGGGAAACCTCAGAATAAGGAAACCCCACATTTTGTATCATACACAAGA
TATGCCAAGCTTATAGTGAACAGGGTATAATGCCCAAGTTTATAATGAACATCTGTGAAA
AGGGCATTGGCATACAAAGATGGGTCCATCTCTTGTAGAGAGAGACAATCATAAAGGGAC
TGATGCAAAGATTGTAAAAAGGAAAAGGCCTATGCACGTGTGCACACACACAGCTAATCC
TTGATTGGACACACCTCTCTTTGATCAGCTTTTGAATGTCTGACAGACACAACAAAAGCC
TGTAGCAGTTAATTAACTGCCTTCCCTCTATAGCATGAAACATGCCATTGTCCAAACCCC
TCTGAGGCCTTGTTAGCAAAAACGTGGGCCATGGGCACACTCACCGCTATCGTGAACAAT
GTTATCAAGGGCAGCTCCATTGAGTAGAAAGTGCATCACACTTTCTCCTATCCTTCCCCC
GGAGACACGCTGTCCACTTCCTCTGCCAATTCCACTGCAAGATCCTCTTTTCCCTTTTTC
CTGGAAACACGCCGGTGCTTTTTAAGAACCAGTCGTGGTTCTGCCTGCTTTACACCCAAA
GCCCCCACCTTGTACCTCATTTCACTCTCTCTC
■■Homology search results ■■ -
sp_hit_id A2BZ72
Definition sp|A2BZ72|SPEE_PROM5 Spermidine synthase OS=Prochlorococcus marinus (strain MIT 9515)
Align length 34
Score (bit) 34.3
E-value 0.55
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912468|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_G11.
(633 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A2BZ72|SPEE_PROM5 Spermidine synthase OS=Prochlorococcus mari... 34 0.55
sp|Q8YUA3|RSGA1_ANASP Putative ribosome biogenesis GTPase rsgA 1... 32 3.5
sp|P20810|ICAL_HUMAN Calpastatin OS=Homo sapiens GN=CAST PE=1 SV=4 30 7.9

>sp|A2BZ72|SPEE_PROM5 Spermidine synthase OS=Prochlorococcus marinus
(strain MIT 9515) GN=speE PE=3 SV=1
Length = 283

Score = 34.3 bits (77), Expect = 0.55
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2

Query: 200 FLQSLHQSLYDCLSLQEMDPSLYANALFTDVHYK 99
+++ + YDC+ + DPS ++N LFTD YK
Sbjct: 143 WVEKAKNNFYDCIFIDCSDPSEFSNLLFTDTFYK 176


>sp|Q8YUA3|RSGA1_ANASP Putative ribosome biogenesis GTPase rsgA 1
OS=Anabaena sp. (strain PCC 7120) GN=rsgA1 PE=3 SV=1
Length = 370

Score = 31.6 bits (70), Expect = 3.5
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -2

Query: 629 ESEMRYKVGALGVKQAEPRLVLKKHRRVSRK---KGKEDLAVE 510
ES ++ K G Q EP+L KK+RR SR+ +G +DL E
Sbjct: 326 ESTLKLKTKGKGQSQYEPKLESKKYRRTSRRTQVQGLQDLYQE 368


>sp|P20810|ICAL_HUMAN Calpastatin OS=Homo sapiens GN=CAST PE=1 SV=4
Length = 708

Score = 30.4 bits (67), Expect = 7.9
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2

Query: 602 ALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVDSVSPGE 474
+LG +QAEP L L+ + V K KE+ +E E D P E
Sbjct: 297 SLGTRQAEPELDLRSIKEVDEAKAKEE-KLEKCGEDDETIPSE 338


tr_hit_id B6UB87
Definition tr|B6UB87|B6UB87_MAIZE EMB1688 OS=Zea mays
Align length 49
Score (bit) 63.5
E-value 1.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912468|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_G11.
(633 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6UB87|B6UB87_MAIZE EMB1688 OS=Zea mays PE=2 SV=1 64 1e-08
tr|B4G0W5|B4G0W5_MAIZE Putative uncharacterized protein OS=Zea m... 64 1e-08
tr|Q7XVB6|Q7XVB6_ORYSJ OSJNBa0072D21.6 protein OS=Oryza sativa s... 62 4e-08
tr|Q01LJ5|Q01LJ5_ORYSA OSIGBa0092E09.3 protein OS=Oryza sativa G... 62 4e-08
tr|A3AT46|A3AT46_ORYSJ Putative uncharacterized protein OS=Oryza... 62 4e-08
tr|A2XSN6|A2XSN6_ORYSI Putative uncharacterized protein OS=Oryza... 62 4e-08
tr|Q4V399|Q4V399_ARATH At1g67440 OS=Arabidopsis thaliana PE=2 SV=1 59 3e-07
tr|O64802|O64802_ARATH T1F15.10 protein OS=Arabidopsis thaliana ... 59 3e-07
tr|A9RXD5|A9RXD5_PHYPA Predicted protein OS=Physcomitrella paten... 57 9e-07
tr|A7QP87|A7QP87_VITVI Chromosome chr1 scaffold_136, whole genom... 55 5e-06
tr|B7FK05|B7FK05_MEDTR Putative uncharacterized protein OS=Medic... 52 4e-05
tr|Q0JDR9|Q0JDR9_ORYSJ Os04g0381600 protein OS=Oryza sativa subs... 49 2e-04
tr|Q572L9|Q572L9_PHYIN Putative uncharacterized protein OS=Phyto... 36 1.7
tr|Q572D5|Q572D5_PHYIN Putative uncharacterized protein OS=Phyto... 36 1.7
tr|O64799|O64799_ARATH T1F15.7 protein (Putative uncharacterized... 36 1.7
tr|B2J3J5|B2J3J5_NOSP7 Ribosome small subunit-dependent GTPase A... 35 2.9
tr|B1WVR0|B1WVR0_CYAA5 Putative uncharacterized protein OS=Cyano... 35 2.9
tr|B4VWJ5|B4VWJ5_9CYAN Ribosome small subunit-dependent GTPase A... 35 3.7
tr|A9T848|A9T848_PHYPA Predicted protein (Fragment) OS=Physcomit... 35 3.7
tr|Q87623|Q87623_SIVCZ Virion infectivity factor OS=Simian immun... 35 4.9
tr|A0ZLK1|A0ZLK1_NODSP Ribosome-associated GTPase OS=Nodularia s... 35 4.9
tr|Q114R1|Q114R1_TRIEI Ribosome small subunit-dependent GTPase A... 34 8.3
tr|Q9ST94|Q9ST94_ORYSA CAA30373.1 protein OS=Oryza sativa GN=q30... 34 8.3
tr|Q7XST1|Q7XST1_ORYSJ OSJNBa0039K24.25 protein OS=Oryza sativa ... 34 8.3
tr|Q0J8S3|Q0J8S3_ORYSJ Os04g0690300 protein OS=Oryza sativa subs... 34 8.3
tr|Q00RM3|Q00RM3_ORYSA H0814G11.17 protein OS=Oryza sativa GN=H0... 34 8.3
tr|B8ARV2|B8ARV2_ORYSI Putative uncharacterized protein OS=Oryza... 34 8.3

>tr|B6UB87|B6UB87_MAIZE EMB1688 OS=Zea mays PE=2 SV=1
Length = 453

Score = 63.5 bits (153), Expect = 1e-08
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVDSV 486
RE ++RYK G +GVKQAEPRL LKKHRRVSRKK + + E+ ++VD +
Sbjct: 391 REGDVRYKTGVIGVKQAEPRLELKKHRRVSRKKINQSILDEIEDDVDDL 439


>tr|B4G0W5|B4G0W5_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 453

Score = 63.5 bits (153), Expect = 1e-08
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVDSV 486
RE ++RYK G +GVKQAEPRL LKKHRRVSRKK + + E+ ++VD +
Sbjct: 391 REGDVRYKTGVMGVKQAEPRLELKKHRRVSRKKINQSILDEIEDDVDDL 439


>tr|Q7XVB6|Q7XVB6_ORYSJ OSJNBa0072D21.6 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0072D21.6 PE=4 SV=2
Length = 366

Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVD 492
RE ++RYK G +GVKQAEPRL LKKHRRVSRKK + + ++ +E+D
Sbjct: 317 REGDVRYKTGVMGVKQAEPRLQLKKHRRVSRKKINQSILDDIDDELD 363


>tr|Q01LJ5|Q01LJ5_ORYSA OSIGBa0092E09.3 protein OS=Oryza sativa
GN=OSIGBa0092E09.3 PE=4 SV=1
Length = 377

Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVD 492
RE ++RYK G +GVKQAEPRL LKKHRRVSRKK + + ++ +E+D
Sbjct: 317 REGDVRYKTGVMGVKQAEPRLQLKKHRRVSRKKINQSILDDIDDELD 363


>tr|A3AT46|A3AT46_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_013968 PE=4 SV=1
Length = 378

Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVD 492
RE ++RYK G +GVKQAEPRL LKKHRRVSRKK + + ++ +E+D
Sbjct: 329 REGDVRYKTGVMGVKQAEPRLQLKKHRRVSRKKINQSILDDIDDELD 375


>tr|A2XSN6|A2XSN6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_15622 PE=4 SV=1
Length = 377

Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVD 492
RE ++RYK G +GVKQAEPRL LKKHRRVSRKK + + ++ +E+D
Sbjct: 317 REGDVRYKTGVMGVKQAEPRLQLKKHRRVSRKKINQSILDDIDDELD 363


>tr|Q4V399|Q4V399_ARATH At1g67440 OS=Arabidopsis thaliana PE=2 SV=1
Length = 433

Score = 58.5 bits (140), Expect = 3e-07
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVDSVS 483
RE ++RYKVG +GVK AEPRL+ KKHRR SRKK K+ + EL E D S
Sbjct: 364 REDDVRYKVGDMGVKHAEPRLMPKKHRRESRKKTKQTMISELDEFEDEDS 413


>tr|O64802|O64802_ARATH T1F15.10 protein OS=Arabidopsis thaliana
GN=T1F15.10 PE=4 SV=1
Length = 450

Score = 58.5 bits (140), Expect = 3e-07
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVDSVS 483
RE ++RYKVG +GVK AEPRL+ KKHRR SRKK K+ + EL E D S
Sbjct: 381 REDDVRYKVGDMGVKHAEPRLMPKKHRRESRKKTKQTMISELDEFEDEDS 430


>tr|A9RXD5|A9RXD5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_179062 PE=4 SV=1
Length = 385

Score = 57.0 bits (136), Expect = 9e-07
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVELAEEVD 492
RES++RYKVGA GVKQAEPRL K+HRR SRK ++ L +L E+++
Sbjct: 327 RESDVRYKVGASGVKQAEPRLQTKRHRRQSRKTVRQSLDEKLWEKME 373


>tr|A7QP87|A7QP87_VITVI Chromosome chr1 scaffold_136, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002842001
PE=4 SV=1
Length = 483

Score = 54.7 bits (130), Expect = 5e-06
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -2

Query: 632 RESEMRYKVGALGVKQAEPRLVLKKHRRVSRKKGKEDLAVEL--AEEVDSVSPGEG 471
RE ++RYK G +GVKQAEPRL KKHRR SRK+ + + EL ++ DS+ EG
Sbjct: 416 REGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQSILDELDDLDDDDSLLDAEG 471