BP912471
Clone id YMU001_000019_H02
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000019_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCCATGTGTGCTCCTCGTGGTCAATGTAGTAGAAACCAACTACATAGTCCCCATCTGGGA
TGCCGCCAAAGTAATACCTTTTACAAATCTCATGTGCTTTAGCTAGTAGTTTCTGCAACC
CTTGTCGAGTTAGCGGAGCCTTCTTGTTGACTGCTTCCGGCGCCCCCTTTTTCCTAAACC
AATCAAATATGTTCTTTTGTTGGGATTCGAACCTCTTCAAGCTATCATCTGTTATGGCGT
TGTCTTTGAGGGTGATGACCCTAAAGGGACCCACCATCCCCCCTCTCCATTACCTGTCAG
CGACACAGAGCCGTAAAAGGGCCTCACAAAGCCCTTGTAAATATTGTCTCTCATTACTTG
TACAACATACATCCCTATTTGGACGGCAAATTTTTCCAGCCACATCTTTGCCAATGTGCC
ATCCTTTCCATCGATGAGACAAAGAATTTTCCAGTTGAGGCTATCATGTTGTGCTATCTC
CACATCATCCTCAAAGTCCACCTTTGTGCCCCATGCT
■■Homology search results ■■ -
sp_hit_id Q7S055
Definition sp|Q7S055|ATG11_NEUCR Autophagy-related protein 11 OS=Neurospora crassa
Align length 116
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912471|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_H02.
(517 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7S055|ATG11_NEUCR Autophagy-related protein 11 OS=Neurospora... 32 1.4
sp|P27475|YOPT_YEREN Cysteine protease yopT OS=Yersinia enteroco... 32 1.8
sp|A7I2T7|MNMC_CAMHC tRNA 5-methylaminomethyl-2-thiouridine bios... 32 2.3
sp|Q93RN4|YOPT_YERPS Cysteine protease yopT OS=Yersinia pseudotu... 30 5.2
sp|O68703|YOPT_YERPE Cysteine protease yopT OS=Yersinia pestis G... 30 5.2
sp|Q8TCJ2|STT3B_HUMAN Dolichyl-diphosphooligosaccharide--protein... 30 8.8

>sp|Q7S055|ATG11_NEUCR Autophagy-related protein 11 OS=Neurospora
crassa GN=atg-11 PE=3 SV=1
Length = 1300

Score = 32.3 bits (72), Expect = 1.4
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = -2

Query: 498 DFEDDVEIAQHDSLNWKILCLIDGKDGTLAKMWLEKFAVQIGMYVVQVMRDNIYKGFVRP 319
D E+D D L W ++ ++ K G + L K V V+ M D +G +
Sbjct: 1105 DDENDNPFDLSDGLRWYLIEAVEDKPGAPSTPGLAKSTVAANN--VEAMADMRTQGHISK 1162

Query: 318 FYGSVSLTGNGEGGWWVPLG-SSPSKTTP*QMIA*RGSNPNKRT--YLIGLGKRGR 160
G LTG G PLG SKT + + R S +++T ++IG RGR
Sbjct: 1163 ARG---LTGRG----GTPLGIEGVSKTLSKSLESRRSSTGSRKTLPFVIGASSRGR 1211


>sp|P27475|YOPT_YEREN Cysteine protease yopT OS=Yersinia
enterocolitica GN=yopT PE=3 SV=2
Length = 322

Score = 32.0 bits (71), Expect = 1.8
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Frame = -1

Query: 334 GLCEALLRLCV---------ADR*WRGGMVGPFRVITLKD-NAITDDSLKRFESQQKNIF 185
G+CEAL + D+ + GG G F++ TL + D K Q +
Sbjct: 137 GVCEALCAHWIWSHAQGQSLFDQLYVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTL 196

Query: 184 DWFRKKGAPEAVNKKAPLTR 125
DWF+KKG E + ++ L R
Sbjct: 197 DWFKKKGISERMIERHCLLR 216


>sp|A7I2T7|MNMC_CAMHC tRNA 5-methylaminomethyl-2-thiouridine
biosynthesis bifunctional protein mnmC OS=Campylobacter
hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 /
CH001A) GN=mnmC PE=3 SV=1
Length = 667

Score = 31.6 bits (70), Expect = 2.3
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = -1

Query: 247 KDNAITDDSLKRFESQQKN-IFDWFRKKGAPEA---VNKKAPLTRQGLQKLLAKAHEICK 80
K+ A DD LKRFE+ K+ IFD F +K P A + A L + + + +K I
Sbjct: 322 KEFAYNDDILKRFETHDKSEIFD-FNRKDLPYASIFIKNAALLRPRKICEFFSKKLNIKF 380

Query: 79 RYYFGGI--PDGDYVVGF 32
Y F +G Y+V F
Sbjct: 381 GYEFSDFVESNGGYIVNF 398


>sp|Q93RN4|YOPT_YERPS Cysteine protease yopT OS=Yersinia
pseudotuberculosis GN=yopT PE=1 SV=2
Length = 322

Score = 30.4 bits (67), Expect = 5.2
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
Frame = -1

Query: 334 GLCEALLRLCVA---------DR*WRGGMVGPFRVITLKD-NAITDDSLKRFESQQKNIF 185
G+CEAL + D+ + GG G F++ TL + D K Q +
Sbjct: 137 GVCEALCAHWIRSHAQGQSLFDQLYVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTL 196

Query: 184 DWFRKKGAPEAVNKKAPLTR 125
DWF+K G E + ++ L R
Sbjct: 197 DWFKKNGISERMIERHCLLR 216


>sp|O68703|YOPT_YERPE Cysteine protease yopT OS=Yersinia pestis
GN=yopT PE=1 SV=1
Length = 322

Score = 30.4 bits (67), Expect = 5.2
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
Frame = -1

Query: 334 GLCEALLRLCVA---------DR*WRGGMVGPFRVITLKD-NAITDDSLKRFESQQKNIF 185
G+CEAL + D+ + GG G F++ TL + D K Q +
Sbjct: 137 GVCEALCAHWIRSHAQGQSLFDQLYVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTL 196

Query: 184 DWFRKKGAPEAVNKKAPLTR 125
DWF+K G E + ++ L R
Sbjct: 197 DWFKKNGISERMIERHCLLR 216


>sp|Q8TCJ2|STT3B_HUMAN Dolichyl-diphosphooligosaccharide--protein
glycosyltransferase subunit STT3B OS=Homo sapiens
GN=STT3B PE=1 SV=1
Length = 826

Score = 29.6 bits (65), Expect = 8.8
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2

Query: 278 PPSPLPVSDTEP*KGLTKPL*ILSLITCTTYIPIWTANFSSHIFA 412
PP P P + GL++P SL++ T W A FSS +FA
Sbjct: 50 PPKPAPAGLSG---GLSQPAGWQSLLSFTILFLAWLAGFSSRLFA 91


tr_hit_id Q4KJY9
Definition tr|Q4KJY9|Q4KJY9_PSEF5 3'(2'),5'-bisphosphate nucleotidase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Align length 83
Score (bit) 33.5
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912471|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_H02.
(517 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4KJY9|Q4KJY9_PSEF5 3'(2'),5'-bisphosphate nucleotidase OS=Ps... 33 6.5
tr|B6KGN5|B6KGN5_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.3

>tr|Q4KJY9|Q4KJY9_PSEF5 3'(2'),5'-bisphosphate nucleotidase
OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
GN=cysQ PE=4 SV=1
Length = 269

Score = 33.5 bits (75), Expect = 6.5
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -2

Query: 492 EDDVEIAQHDSLNWKILCLIDGKDGTLAKM-WLEKFAVQIGMYVVQVMRDNIYKGFV-RP 319
E+D +I Q +W+ L+D DGT + E+F V I + + + + G V P
Sbjct: 62 EEDADIPQATRASWQRWWLVDPLDGTKEFISGSEEFTVNIAL----IEQGRVVFGVVSMP 117

Query: 318 FYGSVSLTGNGEGGWWVPLGSSP 250
G L G G G W V G +P
Sbjct: 118 TSGRCYLGGAGLGAWRVDRGQAP 140


>tr|B6KGN5|B6KGN5_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_046000 PE=4 SV=1
Length = 310

Score = 33.1 bits (74), Expect = 8.3
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
Frame = +3

Query: 60 MPP--K*YLLQISCALASSFCNPCRVSGAFLLTASGAPFFLNQSNMFFCWDSNLFKLSSV 233
+PP K Y Q + ++ SF +P +F A +P + S + +SS
Sbjct: 32 IPPCEKSYFRQPTSPISPSFSSPSSSPVSFSSVAP-SPGCAHPIRSVLTSPSAVTSISSS 90

Query: 234 MALSLRVMTLKGPTIPPLHYLSATQSRKRASQSPCKYCLSLLVQHTSLFGRQIFPATSLP 413
+ R+ T G +PP + ++T + +S S + SL R FP +S+P
Sbjct: 91 SSSPARLGTSFGAPLPPRQFYNSTCISRFSSLSSRLHLASL---------RSSFPVSSVP 141

Query: 414 MCHPFHR*DK-EFSS*GYHVVLSPHHPQSPP 503
C P + SS LSP P++PP
Sbjct: 142 RCSPPCPSSRVSASSPSCSSSLSPASPRNPP 172