BP912504
Clone id YMU001_000019_B05
Library
Length 299
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000019_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTAACTAGAGATACAACAGATGACTTATAGATAAAAGAGCACAAGGGAAGCCAATCAAT
CCATTGTATACTGACCACCCACTGATATGATAAGATGCAAAGTTTAGAAGCTGACACCTC
ACATTGGCAACACAAGTCAGCTACAACTATGACGCTATCATAAGGGTGGCCACTGGCATG
CTGCCATTCGTATATACCCACAGTAACACAACTCTTTCCATTTGAATGNTGGTGGGTTGT
AATGATGTACACTACCCCTTGAGGCAGGCAGGTCAAGAATTCACTCTATCACTGCAAGT
■■Homology search results ■■ -
sp_hit_id Q5RD88
Definition sp|Q5RD88|JHD3A_PONAB JmjC domain-containing histone demethylation protein 3A OS=Pongo abelii
Align length 30
Score (bit) 28.9
E-value 8.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912504|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_B05.
(299 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5RD88|JHD3A_PONAB JmjC domain-containing histone demethylati... 29 8.4
sp|O75164|JHD3A_HUMAN JmjC domain-containing histone demethylati... 29 8.4
sp|Q9NXG6|EGLX_HUMAN Putative HIF-prolyl hydroxylase PH-4 OS=Hom... 29 8.4

>sp|Q5RD88|JHD3A_PONAB JmjC domain-containing histone demethylation
protein 3A OS=Pongo abelii GN=JMJD2A PE=2 SV=1
Length = 1064

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3

Query: 285 SEFLTCLPQGVVYIITTHXHSNGKSCVTVG 196
SE L+C QG ++T H ++ G VTVG
Sbjct: 528 SEPLSCRAQGQTGVLTVHSYAKGDGRVTVG 557


>sp|O75164|JHD3A_HUMAN JmjC domain-containing histone demethylation
protein 3A OS=Homo sapiens GN=JMJD2A PE=1 SV=1
Length = 1064

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3

Query: 285 SEFLTCLPQGVVYIITTHXHSNGKSCVTVG 196
SE L+C QG ++T H ++ G VTVG
Sbjct: 528 SEPLSCRAQGQTGVLTVHSYAKGDGRVTVG 557


>sp|Q9NXG6|EGLX_HUMAN Putative HIF-prolyl hydroxylase PH-4 OS=Homo
sapiens GN=PH4 PE=2 SV=2
Length = 502

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +3

Query: 108 KLTPHIGNTSQ-LQL*RYHKGGHWHAAI---RIYPQ 203
+L+P I S+ LQ+ RY +GGH+HA + +YP+
Sbjct: 302 RLSPEIVELSEPLQVVRYGEGGHYHAHVDSGPVYPE 337


tr_hit_id Q96XA2
Definition tr|Q96XA2|Q96XA2_SULTO Putative uncharacterized protein ST2611 OS=Sulfolobus tokodaii
Align length 58
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912504|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_B05.
(299 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q96XA2|Q96XA2_SULTO Putative uncharacterized protein ST2611 O... 34 4.1
tr|P95863|P95863_SULSO Orf c06016 protein (Peptidase, putative) ... 34 4.1

>tr|Q96XA2|Q96XA2_SULTO Putative uncharacterized protein ST2611
OS=Sulfolobus tokodaii GN=ST2611 PE=4 SV=1
Length = 599

Score = 33.9 bits (76), Expect = 4.1
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1

Query: 218 ERVVLLWVYTNGSMPVATLMIAS*L*LTCVANVRCQLLNFASYHISGWSVYNGLIGFP 45
E + LW T+G+ P+ M++ + VR LN+A YHIS YNG++ P
Sbjct: 501 EGQLFLWYGTSGAAPMTAAMVS-------LPGVRFGALNYALYHIS----YNGIVVSP 547


>tr|P95863|P95863_SULSO Orf c06016 protein (Peptidase, putative)
OS=Sulfolobus solfataricus GN=orf c06016 PE=4 SV=1
Length = 606

Score = 33.9 bits (76), Expect = 4.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1

Query: 209 VLLWVYTNGSMPVATLMIAS*L*LTCVANVRCQLLNFASYHISGWSVYNGLIGFP 45
+ +W T+G+ P+ M+A +A R LNFA YHIS Y G+I P
Sbjct: 510 LFVWYGTSGAAPMTAAMVA-------LAGTRLGALNFALYHIS----YQGIIESP 553