BP912511 |
Clone id |
YMU001_000019_C12 |
Library |
YMU01 |
Length |
545 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000019_C12. |
Accession |
BP912511 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL515Contig1 |
Sequence |
CACCCAAACCAAGTCAAAACTGTAGCATCAACTTCATTGTTGGCAAATGAGTCACTGTAA GCAGCCATGCCAAGGGGCTGTAGCACAGAAATACTCCATCCCTTTTACTTGAAACTCAAA TCAGCATCCTTCTCTTCATGGGGCGCTTGCTCCTAGCACTTGCATCATCATCATTGTCAG CTTGCCCTTCACTGTCATCCTCACCAGCCCCCAGCTCAATTGTTAATTCGCATGGTTCAG ATGAAGTGCGACCTCTATTTCGAGAATTTTTCCTAATGGGAGTAGAAGGGGCCTGAGAAG CCATAGCCTGCTGACTCCTCTTGGGCATAAGCTCTGCCCCTTGTACCACCATCTCCTTCA TCAAAATCCAGTCTTTGAAGTCAAATCTAAAGACAAATTGAGTATTCACAACTTGTTGCT GTTCTTCAACTCCCTGAGGCCTCCCTGCCCTTTCAGCAGCAGTAGGAGCATACCTGAATG CCACAAACTGCTTTCCATCCTGTATTGTAATTTGGGCACGACCATCTTTCACCAAAAATG AGAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q566X8 |
Definition |
sp|Q566X8|DMX1B_DANRE Diencephalon/mesencephalon homeobox protein 1-B OS=Danio rerio |
Align length |
75 |
Score (bit) |
37.0 |
E-value |
0.062 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TPF3 |
Definition |
tr|A9TPF3|A9TPF3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
142 |
Score (bit) |
87.8 |
E-value |
3.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912511|Adiantum capillus-veneris mRNA, clone: YMU001_000019_C12. (545 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TPF3|A9TPF3_PHYPA Predicted protein (Fragment) OS=Physcomit... 88 3e-16 tr|B6TF46|B6TF46_MAIZE Putative uncharacterized protein OS=Zea m... 85 3e-15 tr|B4FSE7|B4FSE7_MAIZE Putative uncharacterized protein OS=Zea m... 85 3e-15 tr|B4FDX3|B4FDX3_MAIZE Putative uncharacterized protein OS=Zea m... 85 3e-15 tr|A7PVV4|A7PVV4_VITVI Chromosome chr8 scaffold_34, whole genome... 79 2e-13 tr|A7NZZ7|A7NZZ7_VITVI Chromosome chr6 scaffold_3, whole genome ... 77 6e-13 tr|Q9C689|Q9C689_ARATH Putative uncharacterized protein F23H24.4... 76 1e-12 tr|B8AJA9|B8AJA9_ORYSI Putative uncharacterized protein OS=Oryza... 73 9e-12 tr|Q69XQ4|Q69XQ4_ORYSJ Os06g0618000 protein OS=Oryza sativa subs... 68 3e-10 tr|B8B4M1|B8B4M1_ORYSI Putative uncharacterized protein OS=Oryza... 68 3e-10 tr|Q7EXY7|Q7EXY7_ORYSJ Os08g0510900 protein OS=Oryza sativa subs... 66 1e-09 tr|B8BCB8|B8BCB8_ORYSI Putative uncharacterized protein OS=Oryza... 66 1e-09 tr|B6V8G0|B6V8G0_HELAN COG5125-like protein OS=Helianthus annuus... 66 1e-09 tr|A3BUR1|A3BUR1_ORYSJ Putative uncharacterized protein OS=Oryza... 66 1e-09 tr|Q9LT44|Q9LT44_ARATH Arabidopsis thaliana genomic DNA, chromos... 63 9e-09 tr|A3A434|A3A434_ORYSJ Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|Q6K3M6|Q6K3M6_ORYSJ Putative uncharacterized protein OSJNBb00... 55 2e-06 tr|A8J9Q8|A8J9Q8_CHLRE Predicted protein OS=Chlamydomonas reinha... 40 0.11 tr|B8B6H7|B8B6H7_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.68 tr|A7SJ31|A7SJ31_NEMVE Predicted protein (Fragment) OS=Nematoste... 37 0.89 tr|A2ET83|A2ET83_TRIVA F/Y-rich N-terminus family protein OS=Tri... 36 1.5 tr|A5B992|A5B992_VITVI Putative uncharacterized protein OS=Vitis... 35 2.0 tr|Q69LA7|Q69LA7_ORYSJ Putative uncharacterized protein B1026C12... 35 3.4 tr|A3BFP3|A3BFP3_ORYSJ Putative uncharacterized protein OS=Oryza... 35 3.4 tr|B4PWL7|B4PWL7_DROYA GE16055 OS=Drosophila yakuba GN=GE16055 P... 35 3.4 tr|A7RIG0|A7RIG0_NEMVE Predicted protein OS=Nematostella vectens... 35 3.4 tr|Q7XNP4|Q7XNP4_ORYSJ OSJNBa0045O17.1 protein (Putative unchara... 34 4.4 tr|Q7QIA2|Q7QIA2_ANOGA AGAP006745-PB OS=Anopheles gambiae GN=AGA... 34 4.4 tr|Q22GD4|Q22GD4_TETTH Putative uncharacterized protein OS=Tetra... 34 4.4 tr|Q2GVM0|Q2GVM0_CHAGB Putative uncharacterized protein OS=Chaet... 34 4.4
>tr|A9TPF3|A9TPF3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148594 PE=4 SV=1 Length = 321
Score = 87.8 bits (216), Expect = 3e-16 Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 4/142 (2%) Frame = -2
Query: 544 LSFLVKDGRAQITI-QDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDW 368 LSFL+KDGRA IT +DG VA + AP++ +R + QV NTQFVFR+D+ W Sbjct: 197 LSFLIKDGRAAITYDKDGTHLVAPKNAPSSHDR--------QSGQVTNTQFVFRYDWTCW 248
Query: 367 ILMKEMVVQGAELMPKRSQ--QAMASQAPSTPIRKNSRNRGRTSSEPCELTIELGAGEDD 194 M+E + GAELMP R + + STPIRK+SRNRGR S A + Sbjct: 249 QTMQEKLEAGAELMPDRQSTLDPLLQPSQSTPIRKHSRNRGRESR---------NANNPE 299
Query: 193 SEGQADNDDDASAR-SKRPMKR 131 ++G +DA R SKR R Sbjct: 300 NDGDDVEPEDAGQRHSKRARGR 321
>tr|B6TF46|B6TF46_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 352
Score = 84.7 bits (208), Expect = 3e-15 Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 11/109 (10%) Frame = -2
Query: 544 LSFLVKDGRAQITIQDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDWI 365 LSFLVKDGR +IT+ D V R AP A+ A +V + FVFRFDFKDW Sbjct: 224 LSFLVKDGRVEITVDDSGHIVRPRNAPAASAIASG--------EVSYSHFVFRFDFKDWK 275
Query: 364 LMKEMVVQGAELMPKRSQQA-----------MASQAPSTPIRKNSRNRG 251 LMKE+V +G EL+P R+ Q+ + ++A TPIRK +RNRG Sbjct: 276 LMKEVVTEGEELLPHRTSQSNLCNEENDQPNLEARAQITPIRKLTRNRG 324
>tr|B4FSE7|B4FSE7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 352
Score = 84.7 bits (208), Expect = 3e-15 Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 11/109 (10%) Frame = -2
Query: 544 LSFLVKDGRAQITIQDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDWI 365 LSFLVKDGR +IT+ D V R AP A+ A +V + FVFRFDFKDW Sbjct: 224 LSFLVKDGRVEITVDDSGHIVRPRNAPAASAIASG--------EVSYSHFVFRFDFKDWK 275
Query: 364 LMKEMVVQGAELMPKRSQQA-----------MASQAPSTPIRKNSRNRG 251 LMKE+V +G EL+P R+ Q+ + ++A TPIRK +RNRG Sbjct: 276 LMKEVVTEGEELLPHRTSQSNLCNEENDQPNLEARAQITPIRKLTRNRG 324
>tr|B4FDX3|B4FDX3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 396
Score = 84.7 bits (208), Expect = 3e-15 Identities = 59/139 (42%), Positives = 68/139 (48%), Gaps = 14/139 (10%) Frame = -2
Query: 544 LSFLVKDGRAQITIQD-GKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDW 368 LSFLVKDGR +I + D G FV R AP A+ A VV FVFRFDFKDW Sbjct: 235 LSFLVKDGRVEIKVNDQGHHFVYPRNAPVASAVASG--------DVVYNHFVFRFDFKDW 286
Query: 367 ILMKEMVVQGAELMPKRSQQAMAS-------------QAPSTPIRKNSRNRGRTSSEPCE 227 LMK +V +G ELMP RS Q +A+ PST IRK RNRG + Sbjct: 287 KLMKGVVPEGEELMPHRSSQTIANTGGNNPTQSEAPLATPSTTIRKLCRNRGLILQDELI 346
Query: 226 LTIELGAGEDDSEGQADND 170 T G E + ND Sbjct: 347 ATGAYGVMEQEMLAMGTND 365
>tr|A7PVV4|A7PVV4_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025372001 PE=4 SV=1 Length = 380
Score = 78.6 bits (192), Expect = 2e-13 Identities = 56/137 (40%), Positives = 70/137 (51%), Gaps = 15/137 (10%) Frame = -2
Query: 544 LSFLVKDGRAQITIQD-GKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDW 368 LSFLVKDGRA+IT+ G V+ R AP A +V FVFRFDFKDW Sbjct: 241 LSFLVKDGRAEITVDGRGCHLVSPRNAPAA--------NAVVSGEVCYNHFVFRFDFKDW 292
Query: 367 ILMKEMVVQGAELMPKR--------------SQQAMASQAPSTPIRKNSRNRGRTSSEPC 230 LM V G ELMP+R +++ A+ AP+TPIRK SRNRG E Sbjct: 293 KLMATSVGAGEELMPQRNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQE-- 350
Query: 229 ELTIELGAGEDDSEGQA 179 + +E DD+ +A Sbjct: 351 QAVVEDSPESDDAGTRA 367
>tr|A7NZZ7|A7NZZ7_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024708001 PE=4 SV=1 Length = 377
Score = 77.0 bits (188), Expect = 6e-13 Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 14/150 (9%) Frame = -2
Query: 544 LSFLVKDGRAQITI-QDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDW 368 LSFLVKDGRA++ + ++G V+ + AP A+ R +VV + FVFRFDFKDW Sbjct: 242 LSFLVKDGRAEVVVDENGSHLVSPKNAPAASSVVAR--------EVVYSHFVFRFDFKDW 293
Query: 367 ILMKEMVVQGAELMP--KRSQQAMASQA-----------PSTPIRKNSRNRGRTSSEPCE 227 LM ++V G ELMP RS+ ASQA +TPI+K SRN G E Sbjct: 294 KLMMDLVPAGEELMPHRDRSKGLNASQAGLAPNDYQDTLHATPIKKFSRNCGLVIQE--- 350
Query: 226 LTIELGAGEDDSEGQADNDDDASARSKRPM 137 +L ED D D A R KR + Sbjct: 351 ---QLVVKED-----PDTGDAAGRRCKRKL 372
>tr|Q9C689|Q9C689_ARATH Putative uncharacterized protein F23H24.4 (Putative uncharacterized protein At1g51130) OS=Arabidopsis thaliana GN=At1g51130 PE=2 SV=1 Length = 403
Score = 75.9 bits (185), Expect = 1e-12 Identities = 58/156 (37%), Positives = 69/156 (44%), Gaps = 16/156 (10%) Frame = -2
Query: 544 LSFLVKDGRAQITI-QDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDW 368 LSFL KDGR +I + + G F R AP A V +V+ FVFR DFKDW Sbjct: 267 LSFLAKDGRVEIIVDKSGSHFAMPRNAPDA--------NVVMSGEVIYNHFVFRLDFKDW 318
Query: 367 ILMKEMVVQGAELMPKRSQQAMASQAP---------------STPIRKNSRNRGRTSSEP 233 LM EMV G ELMP R +S P +TPIRK SRNRG E Sbjct: 319 KLMSEMVPLGEELMPHRQTAVASSSCPAASAPASADFTQDTQTTPIRKLSRNRGLVVQE- 377
Query: 232 CELTIELGAGEDDSEGQADNDDDASARSKRPMKRRM 125 E +E D D ++R KRR+ Sbjct: 378 -ETVVE------------DTPDKEGDGTRRRCKRRL 400
>tr|B8AJA9|B8AJA9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06217 PE=4 SV=1 Length = 360
Score = 73.2 bits (178), Expect = 9e-12 Identities = 48/111 (43%), Positives = 59/111 (53%), Gaps = 13/111 (11%) Frame = -2
Query: 544 LSFLVKDGRAQITIQDGKQFVAF-RYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDW 368 LSFLVKDGR I I D + + R AP A+ A +V + FVFRFDFKDW Sbjct: 226 LSFLVKDGRVAINIDDNGHHIVYPRNAPAASAIASG--------EVSYSHFVFRFDFKDW 277
Query: 367 ILMKEMVVQGAELMPKRSQQAMASQ------------APSTPIRKNSRNRG 251 LM+E+V G ELMP R+ + + A TPIRK +RNRG Sbjct: 278 KLMQEVVPDGEELMPHRNPENIPCAEDHDQADPPELCAQRTPIRKLTRNRG 328
>tr|Q69XQ4|Q69XQ4_ORYSJ Os06g0618000 protein OS=Oryza sativa subsp. japonica GN=P0012B02.6 PE=2 SV=1 Length = 399
Score = 68.2 bits (165), Expect = 3e-10 Identities = 49/126 (38%), Positives = 59/126 (46%), Gaps = 28/126 (22%) Frame = -2
Query: 544 LSFLVKDGRAQITIQDGKQFVAF-RYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDW 368 LSFLVKDGR +I++ D + + R AP A+ +VV FVFRFDFKDW Sbjct: 236 LSFLVKDGRVEISVNDEDHHLVYPRNAPAASAITSG--------KVVYNHFVFRFDFKDW 287
Query: 367 ILMKEMVVQGAELMPKR---------------------------SQQAMASQAPSTPIRK 269 LMK+MVV G ELM R + A+ A ST IRK Sbjct: 288 KLMKDMVVDGEELMQHRPPAPQVGTHGSSTTTTTTTTGGANEGPETETPAAPAHSTAIRK 347
Query: 268 NSRNRG 251 RNRG Sbjct: 348 LCRNRG 353
>tr|B8B4M1|B8B4M1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23710 PE=4 SV=1 Length = 401
Score = 68.2 bits (165), Expect = 3e-10 Identities = 49/126 (38%), Positives = 59/126 (46%), Gaps = 28/126 (22%) Frame = -2
Query: 544 LSFLVKDGRAQITIQDGKQFVAF-RYAPTAAERAGRPQGVEEQQQVVNTQFVFRFDFKDW 368 LSFLVKDGR +I++ D + + R AP A+ +VV FVFRFDFKDW Sbjct: 238 LSFLVKDGRVEISVNDEDHHLVYPRNAPAASAITSG--------KVVYNHFVFRFDFKDW 289
Query: 367 ILMKEMVVQGAELMPKR---------------------------SQQAMASQAPSTPIRK 269 LMK+MVV G ELM R + A+ A ST IRK Sbjct: 290 KLMKDMVVDGEELMQHRPPAPQVGTHGSSTTTTTTTTGGANEGPETETPAAPAHSTAIRK 349
Query: 268 NSRNRG 251 RNRG Sbjct: 350 LCRNRG 355
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