BP912519 |
Clone id |
YMU001_000019_C10 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000019_C10. |
Accession |
BP912519 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCCATAAGTCGATCATCGCCCATTTTTCGCACAAACTTTTCCATTTAGACCTTTCTGAGC CAGCCAGCATACTGGAGGATCCTGTTCTATCCCTACTCTTTTCTACCATATTGAAGTCGC CAACCAACAATCACTCACCTTCAAGAGGAGTATCTCCAAGATGCATCCATAGTTTAGCTA CGTCTTTTGCATTGCAAGGGCCGTACACATTCACAATGGTAAAGGGATGCCCTTCCCATC TGATTCTAATCCCCAGGATATTGCCGAATGGGTGGTTTAGAATCAACTTCGGCTTCAATT ATCTGTCCACAATGCTGAGGATGCCACTGAAGGCGTTACTTCCTTCTCCATTGAATACTA GTTTCTTTCCTAGCGCCTGCTTTCTCTTGCTATGGACATCTAAGTGGTGTTCCTGGATGG CCCAGCAGTTGACTGCCTTCTCCTTTTTTATTTCCTCCCAGAATAAGGTACTCTTCTTAC GGGTTTTCAACCCCTTTACGTTCCAAGATTGGATAGTGAGAGACTCCATCATTAATTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P14381 |
Definition |
sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis |
Align length |
92 |
Score (bit) |
40.8 |
E-value |
0.004 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q76IL5 |
Definition |
tr|Q76IL5|Q76IL5_DANRE Pol-like protein OS=Danio rerio |
Align length |
180 |
Score (bit) |
55.1 |
E-value |
2.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912519|Adiantum capillus-veneris mRNA, clone: YMU001_000019_C10. (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q76IL5|Q76IL5_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 55 2e-06 tr|Q76IL3|Q76IL3_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 49 1e-04 tr|A5AGI5|A5AGI5_VITVI Putative uncharacterized protein OS=Vitis... 47 8e-04 tr|A5BXF3|A5BXF3_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004 tr|Q76IM7|Q76IM7_FUGRU Pol-like protein OS=Fugu rubripes GN=ORF2... 44 0.005 tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 P... 44 0.005 tr|A5Z0F6|A5Z0F6_PIG Endonuclease/reverse transcriptase OS=Sus s... 44 0.005 tr|A5CBN4|A5CBN4_VITVI Putative uncharacterized protein OS=Vitis... 44 0.007 tr|B6KZJ9|B6KZJ9_BRAFL Putative uncharacterized protein (Fragmen... 42 0.016 tr|A5C6T3|A5C6T3_VITVI Putative uncharacterized protein OS=Vitis... 42 0.027 tr|O62658|O62658_CANFA Canis familiaris LINE-1 element ORF2 OS=C... 42 0.027 tr|A5BG45|A5BG45_VITVI Putative uncharacterized protein OS=Vitis... 41 0.035 tr|Q8TE30|Q8TE30_HUMAN Putative uncharacterized protein OS=Homo ... 41 0.035 tr|O00378|O00378_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 41 0.035 tr|O00375|O00375_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 41 0.035 tr|O00372|O00372_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 41 0.035 tr|O00368|O00368_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 41 0.035 tr|O00362|O00362_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 41 0.035 tr|A8VWX8|A8VWX8_9BACI Exodeoxyribonuclease III OS=Bacillus sele... 40 0.060 tr|Q1L835|Q1L835_BOVIN Endonuclease reverse transcriptase OS=Bos... 40 0.060 tr|O00370|O00370_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 40 0.060 tr|Q91Z89|Q91Z89_MOUSE PORF2 OS=Mus musculus domesticus GN=L1Md-... 40 0.078 tr|A9SVI1|A9SVI1_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.078 tr|A5CBJ9|A5CBJ9_VITVI Putative uncharacterized protein OS=Vitis... 40 0.078 tr|A3QS90|A3QS90_PANTR Endonuclease/reverse transcriptase OS=Pan... 40 0.078 tr|O00360|O00360_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 40 0.078 tr|Q76IK6|Q76IK6_CIOIN Pol-like protein OS=Ciona intestinalis GN... 40 0.10 tr|Q894D8|Q894D8_CLOTE Exodeoxyribonuclease III OS=Clostridium t... 39 0.13 tr|Q8LJX1|Q8LJX1_SORBI Putative reverse transcriptase OS=Sorghum... 39 0.13 tr|O00363|O00363_HUMAN Putative p150 OS=Homo sapiens PE=4 SV=1 39 0.13
>tr|Q76IL5|Q76IL5_DANRE Pol-like protein OS=Danio rerio GN=ORF2 PE=4 SV=1 Length = 1233
Score = 55.1 bits (131), Expect = 2e-06 Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 7/180 (3%) Frame = -2
Query: 520 LTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHHLDVHSK---RKQALGKKLVFN 350 L S+N +GL + K E+ K ++ + +QE + H+ +K G + N Sbjct: 17 LNCVSFNARGLMGKDKFEKIREKCKNKEVIG---LQETNWKEHAMNDFKKLWQGDIIYNN 73
Query: 349 GEGSNAFSGILSIVDR*LK--PKLILNHPFGNILGIRIRWEGHPFTIVNVYGPCNAKDVA 176 G+G + G+ ++ + + +++ +G L I + +EGH I N++ P KD Sbjct: 74 GDGKSG-RGVAFLIRKDVLNFKRIVYRDNYGKCLVIEVNYEGHELIIANIHAPTEDKD-K 131
Query: 175 KLWMHLGDTPLEG--E*LLVGDFNMVEKSRDRTGSSSMLAGSERSKWKSLCEKWAMIDLW 2 K + + + L+G E +++GDFN V + +D + R + L ++ ++ID+W Sbjct: 132 KEYFEVLNKVLKGFKEIIMMGDFNTVFRKQDMADGMVFKSDIGRKQLNELIKENSLIDIW 191
>tr|Q76IL3|Q76IL3_DANRE Pol-like protein OS=Danio rerio GN=ORF2 PE=4 SV=1 Length = 1279
Score = 49.3 bits (116), Expect = 1e-04 Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 9/187 (4%) Frame = -2
Query: 535 LMMESLTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHH-----LDVHSKRKQAL 371 L++ L S+N +GL +K E+ K+E+ + +QE + +D++ K Sbjct: 9 LLLMVLNCVSFNARGLMDLRKFKNVKEKCKREEII---ILQETNWKNEVMDIYKKEWD-- 63
Query: 370 GKKLVFNGEGSNAFSGILSIVDR*L--KPKLILNHPFGNILGIRIRWEGHPFTIVNVYGP 197 G NG+ + A G+ ++ + K+I G + + I++EG +VNV+ P Sbjct: 64 GDFYYSNGD-TKAGRGVAILIKKNALQMSKVIYKDKQGKCMILEIKYEGKDIILVNVHAP 122
Query: 196 CNAKDVAKLWMHLGDTPLEG--E*LLVGDFNMVEKSRDRTGSSSMLAGSERSKWKSLCEK 23 N + K + ++ L+ + ++ GDFN V +D T + + R + KSL E+ Sbjct: 123 -NEESEKKSFFNILRRFLKNYKQIIVCGDFNTVFSRQDITEGMVFKSDTGRKELKSLIEE 181
Query: 22 WAMIDLW 2 MID+W Sbjct: 182 KGMIDIW 188
>tr|A5AGI5|A5AGI5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044009 PE=4 SV=1 Length = 1290
Score = 46.6 bits (109), Expect = 8e-04 Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 9/181 (4%) Frame = -2
Query: 520 LTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHHLDVHSK---RKQALGKKLVFN 350 L + SWNV+G K + I+ ++A + I E + ++ R + L + Sbjct: 269 LRLVSWNVRGANDSSKRKVIKAMIRSQRA-DLVCIPETKIQTMTEGVVRSLGSXRFLDWG 327
Query: 349 GEGSNAF-SGILSIVDR*LKPKLILNHPFGNI-LGIRIR--WEGHPFTIVNVYGPCNAKD 182 G+ GIL D+ + +L GN + R++ +G + VYGPCN K+ Sbjct: 328 XMGAQGLXGGILVCXDK--RSLELLEMEVGNFFISCRLKNVEDGVVWIFTGVYGPCNRKE 385
Query: 181 VAKLWMHLGDTP--LEGE*LLVGDFNMVEKSRDRTGSSSMLAGSERSKWKSLCEKWAMID 8 +LW LG E L GDFN+ RDR+ S L G+ R ++ + + A+ID Sbjct: 386 REELWEELGAIRGIWEEPWCLGGDFNVTLSQRDRSRQGS-LNGAMR-RFAQVVDDLALID 443
Query: 7 L 5 L Sbjct: 444 L 444
>tr|A5BXF3|A5BXF3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033119 PE=4 SV=1 Length = 1190
Score = 44.3 bits (103), Expect = 0.004 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 13/170 (7%) Frame = -2
Query: 520 LTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHHLDVHSK---RKQALGKKLVFN 350 + + SWNV+G K + I+ ++A + IQE + ++ R G+ L + Sbjct: 3 IKLVSWNVRGANDSSKRKVIKAMIRSQRA-DLVCIQETKIQTMTEGVVRSLGSGRFLDWG 61
Query: 349 GEGSNAFSG-ILSIVDR*LKPKLILNHPFGNI-LGIRIRWEGHP--FTIVNVYGPCNAKD 182 G+ +G IL D+ + +L GN + +++ + +T VYGPCN K+ Sbjct: 62 AMGAQGSAGGILVCWDK--RSLELLEMEVGNYSISCKLKTVENDVVWTFTGVYGPCNRKE 119
Query: 181 VAKLWMHLG------DTPLEGE*LLVGDFNMVEKSRDRTGSSSMLAGSER 50 LW LG D P + GDFN+ RDR+ S+ R Sbjct: 120 RELLWEELGAIKGIWDEPW----CIGGDFNVTLSQRDRSRQGSLNGAMRR 165
>tr|Q76IM7|Q76IM7_FUGRU Pol-like protein OS=Fugu rubripes GN=ORF2 PE=4 SV=1 Length = 1234
Score = 43.9 bits (102), Expect = 0.005 Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 12/188 (6%) Frame = -2
Query: 529 MESLTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHHLDVHSK---RKQALGKKL 359 M + + + N+ G + +K L ++ K K V+ +QE H + +++ K+ G+ L Sbjct: 1 MHTFRVGTLNINGARDERKRALVFDTTKI-KRVDVMFLQETHSNRNNEADWEKEWEGQAL 59
Query: 358 VFNGEGSNAFSGILSIVDR*LKPK-LILNHPF-GNILGIRIRWEGHPFTIVNVYGPCNA- 188 + + G+ + R P L + H G L ++ R + H +N+Y P N Sbjct: 60 L--SHNTTLSGGVGLLFSRGFTPSSLEVEHVVRGRCLMVKARLQNHSLVFINIYAPTNGT 117
Query: 187 ------KDVAKLWMHLGDTPLEGE*LLVGDFNMVEKSRDRTGSSSMLAGSERSKWKSLCE 26 K V + GD L LVGDFN E DR + LA S S ++ Sbjct: 118 EKELSRKKVGTVLNGCGDDLL----FLVGDFNCTESFLDRDHADPHLA-SFLSLTETAGY 172
Query: 25 KWAMIDLW 2 ++D+W Sbjct: 173 SHGLVDVW 180
>tr|Q76IM1|Q76IM1_DANRE Pol-like protein OS=Danio rerio GN=ORF2 PE=4 SV=1 Length = 1329
Score = 43.9 bits (102), Expect = 0.005 Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 10/160 (6%) Frame = -2
Query: 535 LMMESLTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHHLDVHSKRKQALG-KKL 359 L M L I S N+ G + KK +E IK EK ++ +QE H D + A L Sbjct: 32 LAMGELNIASLNINGAREGKKRFYLFEMIK-EKKIDVLFVQETHSDALNACDWAREYNGL 90
Query: 358 VFNGEGSNAFSGILSIVDR*LKP-----KLILNHPFGNILGIRIRWEGHPFTIVNVYGPC 194 S+ G+ + + P + I+N G +L IR ++E F ++VY P Sbjct: 91 PILSHLSSVSGGVAVLFSKNFIPCSYQVEEIIN---GRLLKIRAQFENSVFVFISVYVPT 147
Query: 193 NAKD----VAKLWMHLGDTPLEGE*LLVGDFNMVEKSRDR 86 A + + L L + E +L GDFN E S DR Sbjct: 148 RAIERMCFLETLSNVLANCNTEDVLILGGDFNCTESSLDR 187
>tr|A5Z0F6|A5Z0F6_PIG Endonuclease/reverse transcriptase OS=Sus scrofa PE=4 SV=1 Length = 1272
Score = 43.9 bits (102), Expect = 0.005 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 7/180 (3%) Frame = -2
Query: 520 LTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHHL---DVHSKRKQALGKKLVFN 350 L+I + NV GL K E IK++K C +QE HL D + + + GK VF+ Sbjct: 7 LSIITLNVNGLNAPIKRHRVAEWIKRQKPSIC-CLQETHLRTKDTYRLKVKGWGK--VFH 63
Query: 349 GEGSNAFSGILSIVDR*L--KPKLILNHPFGNILGIRIRWEGHPFTIVNVYGPCNAKDVA 176 + +G+ +++ + K K I G+ L I+ +G TI+N+Y P N Sbjct: 64 ANRHDRKAGVATLISDKIDFKTKDIKKDKEGHYLMIKGSIQGEDVTIINIYAP-NIGAPR 122
Query: 175 KLWMHLGDT--PLEGE*LLVGDFNMVEKSRDRTGSSSMLAGSERSKWKSLCEKWAMIDLW 2 + L D ++ ++VGD N S DR SS K EK +ID++ Sbjct: 123 YIQQILTDIKGDIDENTIIVGDLNTPLTSMDR--SSRQKTNKATEILKETIEKLDLIDIF 180
>tr|A5CBN4|A5CBN4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022123 PE=4 SV=1 Length = 1420
Score = 43.5 bits (101), Expect = 0.007 Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 13/185 (7%) Frame = -2
Query: 520 LTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHHLDVHSK---RKQALGKKLVFN 350 L + SWNV+G K + I+ ++A + IQE + + R + L + Sbjct: 711 LRLVSWNVRGANDSSKRKVIKAMIRSQRA-DLVCIQETKIQTMTXGVVRSLGSXRFLDWG 769
Query: 349 GEGSNAFSG-ILSIVDR*LKPKLILNHPFGNI-LGIRIR--WEGHPFTIVNVYGPCNAKD 182 G+ +G IL D+ + +L GN + R++ +G + VYG CN K+ Sbjct: 770 AMGAQGSAGGILVCWDK--RSLELLEMEVGNFSISCRLKNVEDGLVWIFTGVYGSCNRKE 827
Query: 181 VAKLWMHLG------DTPLEGE*LLVGDFNMVEKSRDRTGSSSMLAGSERSKWKSLCEKW 20 LW LG D P L GDFN+ RDR+ S L G+ R ++ + + Sbjct: 828 REALWEELGAIRGIWDEPW----CLGGDFNVTLSQRDRSRQGS-LNGAMR-RFAQVVDDL 881
Query: 19 AMIDL 5 A+IDL Sbjct: 882 ALIDL 886
>tr|B6KZJ9|B6KZJ9_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_199990 PE=4 SV=1 Length = 278
Score = 42.4 bits (98), Expect = 0.016 Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 17/191 (8%) Frame = -2
Query: 523 SLTIQSWNVKGLKTRKKSTLFWEEIKKEKAVNCWAIQEHHLDVHSKRKQALGKKL---VF 353 +L++ S NV+GL + K + I ++KA + +QE H + + L K+ F Sbjct: 5 NLSLISLNVRGLLEKNKRSSILSYINRQKA-DVIFLQETHFT--NDTRYVLTKEWQGPCF 61
Query: 352 NGEGSNAFSGILSIVDR*LKPKL--ILNH-----PFGNILGIRIRWEGHPFTIVNVYGPC 194 GSN G+ ++ KP L +L+ G L + EG +VN+Y P Sbjct: 62 QSFGSNCSRGLAILI----KPTLNFVLHDCNSVDSDGRTLVLNCIIEGVELCLVNIYAPN 117
Query: 193 NAKD------VAKLWMHLGDTPLEGE*LLVGDFNMVEKSR-DRTGSSSMLAGSERSKWKS 35 K+ A +W++ D P+ L GD N V+ D+ G + A + K+ Sbjct: 118 KTKERNDFFKKASIWLNCHD-PINL--LCGGDMNCVQNPLVDKKGGRADTALRSVTAMKN 174
Query: 34 LCEKWAMIDLW 2 LC K M D W Sbjct: 175 LCSKLDMCDAW 185
>tr|A5C6T3|A5C6T3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030454 PE=4 SV=1 Length = 1101
Score = 41.6 bits (96), Expect = 0.027 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Frame = -2
Query: 235 EGHPFTIVNVYGPCNAKDVAKLWMHLGDTP--LEGE*LLVGDFNMVEKSRDRTGSSSMLA 62 +G + VYGPCN K+ +LW LG E L GDFN+ RDR+ S L Sbjct: 133 DGVVWIFTGVYGPCNRKEREELWEELGAIRGIWEEPWCLGGDFNVTLSQRDRSRQGS-LN 191
Query: 61 GSERSKWKSLCEKWAMIDL 5 G+ R ++ + + A+IDL Sbjct: 192 GAMR-RFAQVVDDLALIDL 209
|