BP912525
Clone id YMU001_000019_D08
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000019_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACAACGCATACGAAGCTTTCTTTTATCTGCTGCTTTATAAATGAGAGCCACCATGTGTTC
GTGAATGAGATGAGCAGTCTCTGGTGCTCATCTTTGCATTTTAGGCTTGGCATGGGAATC
CTGTCTCTTATGGTGGACAACGTCTTCACCACTGGCAAAGCTGGAGATAGAAGAAGCAAG
CACATGAGGCCTTTTCAATGTAAGTGCAGATGGAGTAGATTATGCCATGTGTCTTGGCGA
GCTAAGATGAGGTTGTTGTCCCTGGAGAGTAGCGATATTTCAGAGCTTTGGGCATTCAGG
CTTTAATGAGAAAGGTCGAAAACAGGCTCCAAGGCCTCGTAATTATCAACCGATGTCGAG
GCCAAAAATTTAGACTTCATCAACTGTCTGCCTGTGCTCTTTGCTCTGTTTGCTCTACAA
TAGGGAAAGAAGAGTTGTACTAAGTCTAAGAAACCAAAGTAGTTGTACAAGTGTCTAACA
AAGGAATGCTTTTCTGTTCAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6UY70
Definition sp|Q6UY70|L_GTOVV RNA-directed RNA polymerase OS=Guanarito virus (isolate Human/Venezuela/NH-95551/1990)
Align length 71
Score (bit) 30.8
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912525|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_D08.
(499 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6UY70|L_GTOVV RNA-directed RNA polymerase OS=Guanarito virus... 31 3.7
sp|P81282|CSPG2_BOVIN Versican core protein OS=Bos taurus GN=VCA... 30 8.2

>sp|Q6UY70|L_GTOVV RNA-directed RNA polymerase OS=Guanarito virus
(isolate Human/Venezuela/NH-95551/1990) GN=L PE=3 SV=1
Length = 2198

Score = 30.8 bits (68), Expect = 3.7
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1

Query: 22 FICCFINESHHVFVNEMSSLWCSSLHFRLGMGILSLMVDNVFTTGKAGDRRSKHM-RPFQ 198
FI ++N++HH+ + ++ C S L + +VD V + G D HM R F+
Sbjct: 637 FIMAYVNQAHHIQLMSKLAVECKSASDVLIQRLSVKIVDMVLSDGSDPD---MHMTRKFK 693

Query: 199 CKCRWSRLCHV 231
S LCH+
Sbjct: 694 FVLNVSYLCHL 704


>sp|P81282|CSPG2_BOVIN Versican core protein OS=Bos taurus GN=VCAN
PE=1 SV=2
Length = 3381

Score = 29.6 bits (65), Expect = 8.2
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = -2

Query: 252 PHLSSPRHMA*STPSALTLKRPHVLASSISSFASGEDVVH-----HKRQDSHAKPKMQR* 88
P P +T S RP + + F+SGE + H+ + + +
Sbjct: 1457 PTAMQPNESKETTESLEITWRPEIYPETAEPFSSGEPDIFPTASIHEGEATEGPDSITEK 1516

Query: 87 APETAHLIHEH 55
PE HL+HEH
Sbjct: 1517 NPELDHLVHEH 1527


tr_hit_id B4WC73
Definition tr|B4WC73|B4WC73_9CAUL Putative uncharacterized protein OS=Brevundimonas sp. BAL3
Align length 58
Score (bit) 33.5
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912525|Adiantum capillus-veneris mRNA, clone:
YMU001_000019_D08.
(499 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4WC73|B4WC73_9CAUL Putative uncharacterized protein OS=Brevu... 33 5.7
tr|Q5TP02|Q5TP02_ANOGA AGAP009955-PA OS=Anopheles gambiae GN=AGA... 33 9.7

>tr|B4WC73|B4WC73_9CAUL Putative uncharacterized protein
OS=Brevundimonas sp. BAL3 GN=BBAL3_3285 PE=4 SV=1
Length = 370

Score = 33.5 bits (75), Expect = 5.7
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2

Query: 107 LAWESCLLWWTTSSPLAKLEIEEAST*GLFNVSADGVDYAMCLGELR*GCCPWRVAIF 280
+AW LLWWT P+A + EE + DGVDY L ++ W V +F
Sbjct: 215 IAWGVLLLWWTGLLPMASIRPEELAG------VVDGVDYGRILVQVV-DAAYWPVTLF 265


>tr|Q5TP02|Q5TP02_ANOGA AGAP009955-PA OS=Anopheles gambiae
GN=AGAP009955 PE=4 SV=1
Length = 202

Score = 32.7 bits (73), Expect = 9.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2

Query: 189 PHVLASSISSFASGEDVVHHKRQDSHAKPKMQR*APETAHLIHEHMVALIYKAA 28
PH LAS + S+A+ E + HH H L+H H AL++ A
Sbjct: 59 PHSLASDLESYAASEALAHHHAHADH-------------ELVHHHPEALLHSLA 99