BP912527
Clone id YMU001_000020_A02
Library
Length 390
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTCATAGGAAACTATCCAAGAGACCTTAAAGATCTATCCGACGAGGAGAGTTGAACTCAA
AACCTGTTATTCAAGAGGGAAATGGCAGAGAGGGAGAGAGAGAGATTAGGAATGGTTGAT
CATATATCTGCATTTTGTAAAGAATAATCAGCAGCTTCACTTCATAGCGATCGATCTTGG
AAGTCCTTACGTGGGGTACACCCCCTTCAACCCTATACATACTTAAGGTTGCTCACATGC
AAATCTTGCATATAAGCATCAGGGCCCTGCTTTGTTTTGCAATATTTAGCTCTCTCACAA
TTTGCTTTCTGCAGAGTCTGGGATGCCAGTATCCCTACTTTTCTGCTCTACCGACCGGGA
AGCCATGACCACATCCTTTCTGGAGATGGA
■■Homology search results ■■ -
sp_hit_id Q8IUD2
Definition sp|Q8IUD2|RB6I2_HUMAN ELKS/RAB6-interacting/CAST family member 1 OS=Homo sapiens
Align length 62
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912527|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_A02.
(390 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8IUD2|RB6I2_HUMAN ELKS/RAB6-interacting/CAST family member 1... 31 2.2
sp|A6NMU1|O52A4_HUMAN Putative olfactory receptor 52A4 OS=Homo s... 29 8.4

>sp|Q8IUD2|RB6I2_HUMAN ELKS/RAB6-interacting/CAST family member 1
OS=Homo sapiens GN=ERC1 PE=1 SV=1
Length = 1116

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1

Query: 4 IGNYPRDLKDLSDEES*TQNLLFKREMAERERERLGMVDHISAFCKE*SAASLHSDRSWK 183
I NY +DLKDL ++ S L + +++E+E L + +H S+ +++ L D K
Sbjct: 647 IDNYKKDLKDLKEKVS-----LLQGDLSEKEASLLDLKEHASSL----ASSGLKKDSRLK 697

Query: 184 SL 189
+L
Sbjct: 698 TL 699


>sp|A6NMU1|O52A4_HUMAN Putative olfactory receptor 52A4 OS=Homo
sapiens GN=OR52A4 PE=5 SV=1
Length = 304

Score = 28.9 bits (63), Expect = 8.4
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +3

Query: 222 LKVAHMQILHISIRA---LLCFAIFSSLTICFLQSLGCQYPYFSALPTGKP*PHPFWRW 389
LKV + I HI + LL F I L + C Y +LPTG P P + W
Sbjct: 240 LKVFNTCIPHIYVFFQFYLLAFFFIFYSQIWILYPIICTYHLVQSLPTGPTIPQPLYLW 298


tr_hit_id A9UZ53
Definition tr|A9UZ53|A9UZ53_MONBE Predicted protein OS=Monosiga brevicollis
Align length 39
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912527|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_A02.
(390 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9UZ53|A9UZ53_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.2
tr|A8P1H1|A8P1H1_COPC7 Predicted protein OS=Coprinopsis cinerea ... 33 7.1

>tr|A9UZ53|A9UZ53_MONBE Predicted protein OS=Monosiga brevicollis
GN=MBCDH23 PE=4 SV=1
Length = 4117

Score = 33.9 bits (76), Expect = 4.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2

Query: 308 KANCERAKYCKTKQGPDAYMQDLHVSNLKYV*G*RGCTP 192
K + + Y T +GP++Y +DL V NL Y G GC P
Sbjct: 1859 KTSSSSSSYSLTIRGPNSYARDLDVKNLFYYNGVCGCLP 1897


>tr|A8P1H1|A8P1H1_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05575 PE=4
SV=1
Length = 500

Score = 33.1 bits (74), Expect = 7.1
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1

Query: 61 NLLFKREMAERER-ERLGMVDHISAFCKE*SAASLHSDRSWKSLRGVHPLQPYTYLRLL 234
+L+ E ++R+ E+L V + SA CK ++++ R W +L G H + P TY +L
Sbjct: 18 HLVSAGETSDRDHNEKLKDVVNASAVCKTWREHTVNAKRVWAALAGAHKVSPSTYGSIL 76