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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912545
Clone id YMU001_000020_B09
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCCTGGCGCTGAAGAAAGAAAGGATCCTTGTCAGCTCGCTAAGACAATTCTAGGATCATT
ATTTAGCGGCCTGAAAGAAGTGGTTGTCGATTGTGAAGAGAAGTGCAAGAAAAACATTAC
AAGGCAGATGAAAGAGACAGCTGCAAAGGCAGTGGAGGTGCCCAAATGGAAAGCAGTCAC
TAGCGCTGAACTGTCTATGTTAGAAGATGAAGAAGGTATAGAAGAAAGGAAATTATCTGA
TGTGGATCAGCTAAATAAATTGGTGAAGGGATCTGCATTAGCTACCTCATCAAAGGAAGA
GGGGAGAAGCTCTTATGGCGATTGGGATGATTATGAGCGTCACCAGGCTAGCGCAAAGCA
ACACTGGAAGACAATGCAATCGTATTTAACAGCTGCAACTGCAGCCTATGCGTCATCGGA
TTTTCATAAAGCAGAACTTCTAACAGAGAAGGGCAATATATACAAACAATTATCTATGGA
A
■■Homology search results ■■ -
sp_hit_id P0AFM8
Definition sp|P0AFM8|PSPA_SHIFL Phage shock protein A OS=Shigella flexneri
Align length 129
Score (bit) 35.4
E-value 0.14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912545|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_B09.
         (481 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0AFM8|PSPA_SHIFL Phage shock protein A OS=Shigella flexneri ...    35   0.14 
sp|P0AFM6|PSPA_ECOLI Phage shock protein A OS=Escherichia coli (...    35   0.14 
sp|P0AFM7|PSPA_ECO57 Phage shock protein A OS=Escherichia coli O...    35   0.14 
sp|P07197|NFM_HUMAN Neurofilament medium polypeptide OS=Homo sap...    33   0.68 
sp|Q7ZYG5|MK16B_XENLA Protein MAK16 homolog B OS=Xenopus laevis ...    33   0.89 
sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate...    33   0.89 
sp|Q65NQ9|CWLO_BACLD Peptidoglycan DL-endopeptidase cwlO OS=Baci...    33   0.89 
sp|P49916|DNLI3_HUMAN DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1 ...    32   2.0  
sp|Q8YXY3|SYI_ANASP Isoleucyl-tRNA synthetase OS=Anabaena sp. (s...    30   4.4  
sp|P0C1B0|FKBP4_EMENI FK506-binding protein 4 OS=Emericella nidu...    30   4.4  
sp|Q2UN37|FKBP4_ASPOR FK506-binding protein 4 OS=Aspergillus ory...    30   4.4  
sp|O14164|EIF3C_SCHPO Eukaryotic translation initiation factor 3...    30   4.4  
sp|Q54CV3|CCD93_DICDI Coiled-coil domain-containing protein 93 h...    30   4.4  
sp|Q5R822|NUP93_PONAB Nuclear pore complex protein Nup93 OS=Pong...    30   5.7  
sp|A5FE91|Y3464_FLAJ1 Putative reductase Fjoh_3464 OS=Flavobacte...    30   7.5  
sp|Q1LIB8|TATB_RALME Sec-independent protein translocase protein...    30   7.5  
sp|A9BJE0|SYA_PETMO Alanyl-tRNA synthetase OS=Petrotoga mobilis ...    30   7.5  
sp|Q11W68|Y1071_CYTH3 Putative reductase CHU_1071 OS=Cytophaga h...    29   9.8  
sp|Q2KHP8|TYW1_XENLA tRNA wybutosine-synthesizing protein 1 homo...    29   9.8  
sp|A3PAV8|SYI_PROM0 Isoleucyl-tRNA synthetase OS=Prochlorococcus...    29   9.8  
sp|P62691|GAK19_HUMAN HERV-K_4p16.1 provirus ancestral Gag polyp...    29   9.8  
sp|Q9H943|CJ068_HUMAN Uncharacterized protein C10orf68 OS=Homo s...    29   9.8  

>sp|P0AFM8|PSPA_SHIFL Phage shock protein A OS=Shigella flexneri
           GN=pspA PE=3 SV=2
          Length = 222

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ VE   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVKG---------SALATSSKEEGRSSYGDWDDYE 337
           AEL++L++ E +    L +  +L  L+K            LA   KE G       +   
Sbjct: 75  AELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRA 134

Query: 338 RHQASAKQH 364
           R QA   +H
Sbjct: 135 RQQALMLRH 143


>sp|P0AFM6|PSPA_ECOLI Phage shock protein A OS=Escherichia coli
           (strain K12) GN=pspA PE=1 SV=2
          Length = 222

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ VE   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVKG---------SALATSSKEEGRSSYGDWDDYE 337
           AEL++L++ E +    L +  +L  L+K            LA   KE G       +   
Sbjct: 75  AELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRA 134

Query: 338 RHQASAKQH 364
           R QA   +H
Sbjct: 135 RQQALMLRH 143


>sp|P0AFM7|PSPA_ECO57 Phage shock protein A OS=Escherichia coli
           O157:H7 GN=pspA PE=3 SV=2
          Length = 222

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ VE   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVKG---------SALATSSKEEGRSSYGDWDDYE 337
           AEL++L++ E +    L +  +L  L+K            LA   KE G       +   
Sbjct: 75  AELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRA 134

Query: 338 RHQASAKQH 364
           R QA   +H
Sbjct: 135 RQQALMLRH 143


>sp|P07197|NFM_HUMAN Neurofilament medium polypeptide OS=Homo
           sapiens GN=NEFM PE=1 SV=2
          Length = 916

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKCKKNITRQMKETAAKAVEVPKWKAVTSAE 190
           +E+ +  +    I   L + +KE   +  E+ ++    + +E AAK   V         E
Sbjct: 464 DEKSEMEEALTAITEELAASMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEE 523

Query: 191 LSMLEDEEGIEERKLSDVDQLNKLVK---GSALATSSKEEGRSSYGDWD-DYERHQASAK 358
               E+EEG EE +  D    +   +        +S KEEG    G+ + + E  +A AK
Sbjct: 524 EGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAK 583

Query: 359 QHWK 370
           +  K
Sbjct: 584 EEKK 587


>sp|Q7ZYG5|MK16B_XENLA Protein MAK16 homolog B OS=Xenopus laevis
           GN=mak16-B PE=2 SV=1
          Length = 304

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 23/87 (26%), Positives = 42/87 (48%)
 Frame = +2

Query: 110 KNITRQMKETAAKAVEVPKWKAVTSAELSMLEDEEGIEERKLSDVDQLNKLVKGSALATS 289
           K + +Q + +A+++ +  +     S +   +ED++ +EE  LSD + ++KL   S     
Sbjct: 188 KALEQQDEASASESSDEEEEDDEESGKREFVEDDD-VEESDLSDFEDMDKLGASSDEDKP 246

Query: 290 SKEEGRSSYGDWDDYERHQASAKQHWK 370
           S E    S G+ D+ E     AK   K
Sbjct: 247 SSESEEESSGEEDEKEEKAPKAKSKGK 273


>sp|P42566|EPS15_HUMAN Epidermal growth factor receptor substrate 15
           OS=Homo sapiens GN=EPS15 PE=1 SV=2
          Length = 896

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEV--VVDCEEKCKKNITRQMKETAAKAVEVPKWKAVTS 184
           ++ +D  Q   T L  L +  ++V  ++D  ++ K  +  Q+KE   K  E  +  +   
Sbjct: 371 QDLQDEVQRENTNLQKLQAQKQQVQELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLK 430

Query: 185 AELSMLEDEEGIEERKLSDV-DQLNKLVKGSALATSSKEEGRSSYGDWDDYERHQASAKQ 361
           AEL+  E +    E +L+   ++L++L + +A    S E G++     +  ++H   ++Q
Sbjct: 431 AELTSQESQISTYEEELAKAREELSRLQQETAELEESVESGKAQL---EPLQQHLQDSQQ 487

Query: 362 HWKTMQ 379
              +MQ
Sbjct: 488 EISSMQ 493


>sp|Q65NQ9|CWLO_BACLD Peptidoglycan DL-endopeptidase cwlO
           OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580)
           GN=cwlO PE=3 SV=1
          Length = 452

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
 Frame = +2

Query: 11  EERKDPCQLAKTI--LGSLFSGLKEVVVDCEEKCKKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ KD  +L K +  L +    +++ + D +   K ++ +Q+KE A  + ++   +A   
Sbjct: 169 EQEKDKNKLEKAMSDLNTKLDEIQKTLADLKT-LKSDLDKQLKEQANLSKQLQTKQAAAE 227

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVKGSALATSSKEE 301
           +ELS L+ E G   ++ + ++Q  K  + +A A +  +E
Sbjct: 228 SELSDLKKEAGSLTKEEAALEQKLKEERAAAAAAAKAKE 266


>sp|P49916|DNLI3_HUMAN DNA ligase 3 OS=Homo sapiens GN=LIG3 PE=1
           SV=1
          Length = 922

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = +2

Query: 89  DCEEKCKKNITRQMKETAAKAVEVPKWKAVTSAELSMLEDEEGIEERKLSDVDQLNKLVK 268
           + E+  K+ IT+ + + ++KA   PK KAV  A              KL+   Q+   VK
Sbjct: 81  ELEDNEKEQITQHIADLSSKAAGTPKKKAVVQA--------------KLTTTGQVTSPVK 126

Query: 269 GSALATSSKEEGRSSY 316
           G++  TS+     S +
Sbjct: 127 GASFVTSTNPRKFSGF 142


>sp|Q8YXY3|SYI_ANASP Isoleucyl-tRNA synthetase OS=Anabaena sp.
           (strain PCC 7120) GN=ileS PE=3 SV=1
          Length = 960

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +2

Query: 107 KKNITRQMKETAAKAVEVPKWKAV-TSAELSMLEDEEGIEERKLSDVDQLNKLVKGSALA 283
           K  I R       K   VP W       EL +L++ +  E + L+ + QL +  K  ALA
Sbjct: 77  KDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNLKSAERQNLTPL-QLRQKAKEFALA 135

Query: 284 T-SSKEEGRSSYGDWDDYERHQASAKQHWKTMQ 379
           T  ++ +    YG W D++    + K  ++  Q
Sbjct: 136 TVDNQRQNFKRYGVWGDWDNPYLTLKPEYEAAQ 168


>sp|P0C1B0|FKBP4_EMENI FK506-binding protein 4 OS=Emericella
           nidulans GN=fpr4 PE=3 SV=1
          Length = 478

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 25/75 (33%), Positives = 33/75 (44%)
 Frame = +2

Query: 89  DCEEKCKKNITRQMKETAAKAVEVPKWKAVTSAELSMLEDEEGIEERKLSDVDQLNKLVK 268
           D E+  + N     KE A K  E    K +  A   M ED+E  E  +      ++KLVK
Sbjct: 85  DSEDDEEVNGGPSDKEKARKLKEAAYLKELEDA---MSEDDESDEGEEFDLKAAISKLVK 141

Query: 269 GSALATSSKEEGRSS 313
           G A AT   +E   S
Sbjct: 142 GKAPATDDDDEDAES 156
tr_hit_id A9SQF3
Definition tr|A9SQF3|A9SQF3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 89
Score (bit) 40.0
E-value 0.057
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912545|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_B09.
         (481 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SQF3|A9SQF3_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.057
tr|Q31ZZ9|Q31ZZ9_SHIBS Phage shock protein OS=Shigella boydii se...    37   0.63 
tr|A6D492|A6D492_9VIBR Aspartokinase OS=Vibrio shilonii AK1 GN=V...    37   0.63 
tr|B1EN55|B1EN55_9ESCH Phage shock protein A OS=Escherichia albe...    36   0.83 
tr|Q8FHS5|Q8FHS5_ECOL6 Phage shock protein A OS=Escherichia coli...    36   1.1  
tr|Q32F60|Q32F60_SHIDS Phage shock protein OS=Shigella dysenteri...    36   1.1  
tr|Q1RC62|Q1RC62_ECOUT Phage shock protein A OS=Escherichia coli...    36   1.1  
tr|Q0TI62|Q0TI62_ECOL5 Phage shock protein OS=Escherichia coli O...    36   1.1  
tr|A1AAR8|A1AAR8_ECOK1 Phage shock protein A OS=Escherichia coli...    36   1.1  
tr|B7MLX9|B7MLX9_ECOLX Regulatory protein for phage-shock-protei...    36   1.1  
tr|B3HP54|B3HP54_ECOLX Phage shock protein A OS=Escherichia coli...    36   1.1  
tr|Q7N5I7|Q7N5I7_PHOLL Complete genome; segment 7/17 OS=Photorha...    35   1.4  
tr|Q3Z151|Q3Z151_SHISS Phage shock protein OS=Shigella sonnei (s...    35   1.4  
tr|Q0T593|Q0T593_SHIF8 Phage shock protein, inner membrane prote...    35   1.4  
tr|B6IA19|B6IA19_ECOSE Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B5Z0M5|B5Z0M5_ECO5E Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B2U0K3|B2U0K3_SHIB3 Phage shock protein A OS=Shigella boydii ...    35   1.4  
tr|B1XCD3|B1XCD3_ECODH Regulatory protein for phage-shock-protei...    35   1.4  
tr|B1ITE9|B1ITE9_ECOLC Phage shock protein A, PspA OS=Escherichi...    35   1.4  
tr|A7ZZP6|A7ZZP6_ECOHS Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|A7ZLD2|A7ZLD2_ECO24 Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B7L568|B7L568_ECOLX Regulatory protein for phage-shock-protei...    35   1.4  
tr|B7A3B5|B7A3B5_ECO57 Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B3XC31|B3XC31_ECOLX Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B3X388|B3X388_SHIDY Phage shock protein A OS=Shigella dysente...    35   1.4  
tr|B3WGB6|B3WGB6_ECOLX Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B3IEF1|B3IEF1_ECOLX Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B3I2E0|B3I2E0_ECOLX Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B3H8A3|B3H8A3_ECOLX Phage shock protein A OS=Escherichia coli...    35   1.4  
tr|B3BX18|B3BX18_ECO57 Phage shock protein A OS=Escherichia coli...    35   1.4  

>tr|A9SQF3|A9SQF3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_166162 PE=4 SV=1
          Length = 858

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 28/89 (31%), Positives = 39/89 (43%)
 Frame = +2

Query: 215 GIEERKLSDVDQLNKLVKGSALATSSKEEGRSSYGDWDDYERHQASAKQHWKTMQXXXXX 394
           G+E   LS VD + K +       S   EG       DDY  H+  AK++W TMQ     
Sbjct: 626 GVEGGALSTVDSVRKNIA----IHSHNFEGNVGA---DDYNSHRHCAKENWSTMQNYFRE 678

Query: 395 XXXXXXXXDFHKAELLTEKGNIYKQLSME 481
                       A +L+EKG  +K+L+ E
Sbjct: 679 AASAYSRGQRSYASVLSEKGKYHKKLAQE 707


>tr|Q31ZZ9|Q31ZZ9_SHIBS Phage shock protein OS=Shigella boydii
           serotype 4 (strain Sb227) GN=pspA PE=4 SV=1
          Length = 222

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ VE   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVKG---------SALATSSKEEGRSSYGDWDDYE 337
           AEL++L++ E +    L +  +L  L+K            LA   KE G       +   
Sbjct: 75  AELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKESGELENKLSETRA 134

Query: 338 RHQASAKQH 364
           R QA   +H
Sbjct: 135 RQQALMLRH 143


>tr|A6D492|A6D492_9VIBR Aspartokinase OS=Vibrio shilonii AK1
           GN=VSAK1_13886 PE=3 SV=1
          Length = 449

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 22/85 (25%), Positives = 48/85 (56%)
 Frame = +2

Query: 41  KTILGSLFSGLKEVVVDCEEKCKKNITRQMKETAAKAVEVPKWKAVTSAELSMLEDEEGI 220
           K ++ S  SG+  ++V+        +   +K+ A +A  + + +A+ +  +S L+D   I
Sbjct: 34  KLVVSSACSGVTNILVE--------LANGVKDEARRAELINRLRAIHTDIMSQLKDTSSI 85

Query: 221 EERKLSDVDQLNKLVKGSALATSSK 295
           EER  + V+++  L + +++ATS+K
Sbjct: 86  EERVEALVEKVATLSEAASIATSAK 110


>tr|B1EN55|B1EN55_9ESCH Phage shock protein A OS=Escherichia
           albertii TW07627 GN=pspA PE=4 SV=1
          Length = 222

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ VE   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVKG---------SALATSSKEEGRSSYGDWDDYE 337
           AEL++++D E +    L +  +L  L+K            LA   KE G       +   
Sbjct: 75  AELALMKDREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRA 134

Query: 338 RHQASAKQH 364
           R QA   +H
Sbjct: 135 RQQALMLRH 143


>tr|Q8FHS5|Q8FHS5_ECOL6 Phage shock protein A OS=Escherichia coli O6
           GN=pspA PE=4 SV=1
          Length = 222

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ +E   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREIE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVK 268
           AEL++L+D E +    L +  +L  L+K
Sbjct: 75  AELALLKDREDLARAALIEKQKLTDLIK 102


>tr|Q32F60|Q32F60_SHIDS Phage shock protein OS=Shigella dysenteriae
           serotype 1 (strain Sd197) GN=pspA PE=4 SV=1
          Length = 222

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ +E   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREIE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVK 268
           AEL++L+D E +    L +  +L  L+K
Sbjct: 75  AELALLKDREDLARAALIEKQKLTDLIK 102


>tr|Q1RC62|Q1RC62_ECOUT Phage shock protein A OS=Escherichia coli
           (strain UTI89 / UPEC) GN=pspA PE=4 SV=1
          Length = 222

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ +E   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREIE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVK 268
           AEL++L+D E +    L +  +L  L+K
Sbjct: 75  AELALLKDREDLARAALIEKQKLTDLIK 102


>tr|Q0TI62|Q0TI62_ECOL5 Phage shock protein OS=Escherichia coli
           O6:K15:H31 (strain 536 / UPEC) GN=ECP_1356 PE=4 SV=1
          Length = 222

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ +E   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREIE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVK 268
           AEL++L+D E +    L +  +L  L+K
Sbjct: 75  AELALLKDREDLARAALIEKQKLTDLIK 102


>tr|A1AAR8|A1AAR8_ECOK1 Phage shock protein A OS=Escherichia coli
           O1:K1 / APEC GN=pspA PE=4 SV=1
          Length = 222

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ +E   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREIE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVK 268
           AEL++L+D E +    L +  +L  L+K
Sbjct: 75  AELALLKDREDLARAALIEKQKLTDLIK 102


>tr|B7MLX9|B7MLX9_ECOLX Regulatory protein for phage-shock-protein
           operon OS=Escherichia coli GN=pspA PE=4 SV=1
          Length = 222

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +2

Query: 11  EERKDPCQLAKTILGSLFSGLKEVVVDCEEKC--KKNITRQMKETAAKAVEVPKWKAVTS 184
           E+ +DP +L + ++  +   L EV          KK +TR++++ +A+ +E   W+    
Sbjct: 20  EKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREIE---WQE--K 74

Query: 185 AELSMLEDEEGIEERKLSDVDQLNKLVK 268
           AEL++L+D E +    L +  +L  L+K
Sbjct: 75  AELALLKDREDLARAALIEKQKLTDLIK 102