BP912551
Clone id YMU001_000020_C03
Library
Length 394
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TAGGACCACCTGTGTGCTCGGATATGGCTGATCCGGTGCGGTCTTGGACATGATTGAGAG
AGAAGAAGCTTGCTGTTTTCTTCTGGTTTTCTCCCAGTTTGGGGCAGCTTTGGGTGGAGG
CCTTGGATCTTCGTCTATGACTTCCCCGACTTTACCCTCGATTACCCTGATCTCTCTTCA
CCGAGGGGAGCCGATGGAGACTTCAAGATGTGTAGCAGTGCTGGATTGCTTTGGTTATCC
GAGATGGAGTCATCTTACCGTGCTTTCCCGCAAGGAGAGCATGCGGTTGCTAGATCCAGA
GGGGGAGCTACTCATTTCCAGCTTCTTCTTTAGAGAGAAGTGTTTGGACGGGAGTAGGAT
CTTCTTCATCCCTTTTGGAGGAGCTTTCTATGAC
■■Homology search results ■■ -
sp_hit_id Q2U968
Definition sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16 OS=Aspergillus oryzae
Align length 38
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912551|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C03.
(394 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16 OS=Asper... 30 2.9
sp|Q7XJR2|ANTR3_ARATH Probable anion transporter 3, chloroplasti... 29 6.4
sp|Q6FPK7|ACEA_CANGA Isocitrate lyase OS=Candida glabrata GN=ICL... 29 6.4
sp|Q8NA70|FA47B_HUMAN Protein FAM47B OS=Homo sapiens GN=FAM47B P... 29 6.4
sp|Q57624|GATB_METJA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 29 8.3
sp|Q9P377|BGS3_SCHPO 1,3-beta-glucan synthase component bgs3 OS=... 29 8.3

>sp|Q2U968|SEC16_ASPOR COPII coat assembly protein sec16
OS=Aspergillus oryzae GN=sec16 PE=3 SV=1
Length = 1843

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2

Query: 126 PRPPPKAAPNWEKTRRKQQASSLSIMSKTAPDQPYPST 13
P PP AAP +TR Q SS+S P QP S+
Sbjct: 676 PAPPQSAAPAPPRTRYASQPSSVSSQGAVLPFQPRTSS 713


>sp|Q7XJR2|ANTR3_ARATH Probable anion transporter 3, chloroplastic
OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2
Length = 512

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1

Query: 166 PDLSSPRGADGDFKMCSSAGLLWLSEMESSYRAFPQGEHAVARS 297
P + S G G F + +S GLLW+S S PQ + RS
Sbjct: 247 PLMLSSIGISGPFILFASLGLLWVSTWSSGVTNNPQDSPFITRS 290


>sp|Q6FPK7|ACEA_CANGA Isocitrate lyase OS=Candida glabrata GN=ICL1
PE=3 SV=2
Length = 553

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2

Query: 102 PNWEKTRRKQQASSLSIMSKTAPDQPYPST 13
P W KT+R A ++I T P YPS+
Sbjct: 32 PRWNKTKRTYSAREIAIRRGTFPPLTYPSS 61


>sp|Q8NA70|FA47B_HUMAN Protein FAM47B OS=Homo sapiens GN=FAM47B PE=2
SV=2
Length = 645

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3

Query: 134 TKIQGLHPKLPQTG--RKPEENSKLLLSQSCPRPHR--ISHI 21
T++ LHP+ P+TG E SK +S CP P +SH+
Sbjct: 290 TRVSHLHPEPPETGVSHLRPEPSKTQVSSLCPEPPEAGVSHL 331


>sp|Q57624|GATB_METJA Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B OS=Methanocaldococcus
jannaschii GN=gatB PE=3 SV=1
Length = 472

Score = 28.9 bits (63), Expect = 8.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1

Query: 136 YDFPDFTLDYPDLSSPRGADGDF 204
YD+PD Y S+P G DG+F
Sbjct: 90 YDYPDLPSGYQRTSTPIGVDGEF 112


>sp|Q9P377|BGS3_SCHPO 1,3-beta-glucan synthase component bgs3
OS=Schizosaccharomyces pombe GN=bgs3 PE=1 SV=1
Length = 1826

Score = 28.9 bits (63), Expect = 8.3
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +1

Query: 67 SLLFSSGFLPVWGSFGWRPWIFVY-DFPD---FT-LDYPDLSSPRGADGDFKMCSSAGLL 231
S +FS + GS W PW ++ + P FT L Y DLS+ +FK G +
Sbjct: 675 STMFSIAYSFYMGSAIWTPWRVIFSNLPRRIYFTLLAYKDLST------EFKPKIYVGQI 728

Query: 232 WLSEMESSYR 261
W S M S YR
Sbjct: 729 WNSIMISMYR 738


tr_hit_id A4H509
Definition tr|A4H509|A4H509_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis
Align length 49
Score (bit) 36.2
E-value 0.83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912551|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C03.
(394 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4H509|A4H509_LEIBR Putative uncharacterized protein OS=Leish... 36 0.83
tr|B6TKP3|B6TKP3_MAIZE Putative uncharacterized protein OS=Zea m... 34 3.2
tr|A4HDK0|A4HDK0_LEIBR Mismatch repair protein, putative OS=Leis... 33 5.4

>tr|A4H509|A4H509_LEIBR Putative uncharacterized protein
OS=Leishmania braziliensis GN=LbrM07_V2.0650 PE=4 SV=1
Length = 1511

Score = 36.2 bits (82), Expect = 0.83
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -2

Query: 159 EGKVGEVIDEDPRPPPKAAPNWEKTRRKQQASSLSIMSKTAPDQPYPST 13
E + +D D R P++ P WE T+R+Q+A++ + +T P PST
Sbjct: 307 EDQQSAALDRDARTTPQSGPGWEVTKRQQEAAAEAAHQETPP----PST 351


>tr|B6TKP3|B6TKP3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 125

Score = 34.3 bits (77), Expect = 3.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3

Query: 110 KLPQTGRKPEENSKLLLSQSCPRPHRISHIRAH 12
+ P + P SK+++ +CPR HR+ HI AH
Sbjct: 83 RTPTSSPSPATVSKVMIHSACPRAHRMDHIWAH 115


>tr|A4HDK0|A4HDK0_LEIBR Mismatch repair protein, putative
OS=Leishmania braziliensis GN=LbrM24_V2.1460 PE=4 SV=1
Length = 1368

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1

Query: 106 SFGWRPWIFVYDFPDFTLDYPDLSSPRGADGDFKMCSSA 222
+ WR +F D TL Y DL + GADG F +SA
Sbjct: 1081 ALAWRQLLFKADLEHSTLSYADLPTESGADGAFAASASA 1119