BP912553
Clone id YMU001_000020_C05
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCAGAAGCAGGTGGAGATCATAATGCAGCAGCTGAGCTCAATTTCAAGCAAATGCATGC
AATCAAATGTGAAGAGCATGCAGGTAATGACAAGGGGAGCACCATGGCTACTCTCTTGCT
CTTTGAAATGGCCACCATGAGAGCTCGATTTTCAATTCGGTCGTTCTCGAAGGCCCTCAT
CAAGCAAATGGAGGCATCAGGCTACTCAGTGCTTCGAACCCTATCCGAATTAGAGCCCAA
TGTGGCCTTTACAAAGAAGGAGCATGTGGTGTACACATTGGAGTCTAGAATCAACAAGGC
GTTCTTCCATTGCTTTGAGAATGACAGCTTCGATGACTCCGGGTTGATGCAGATCTTAGA
CCCTGTCATACGTTGCACAACCCGGCTTGAAGAGTTCCAGAGAATGAAATTGGTTGAAGT
CGATGATGCAGTGAATGCAAATCACCCATCATTCGACCCGGACTTCCGAAGATTTTGCCA
GAGGAAGACAAAGGAGCTATGGTCGCAATTCTCTTGGCATATAGTGTTCAAC
■■Homology search results ■■ -
sp_hit_id O43379
Definition sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo sapiens
Align length 25
Score (bit) 30.8
E-value 4.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912553|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C05.
(517 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo sa... 31 4.0
sp|Q8HXL3|WDR62_PIG WD repeat-containing protein 62 OS=Sus scrof... 30 5.2
sp|Q8SSS9|QKGA_DICDI Probable serine/threonine-protein kinase qk... 30 5.2
sp|Q3U3T8|WDR62_MOUSE WD repeat-containing protein 62 OS=Mus mus... 30 6.8
sp|P07949|RET_HUMAN Proto-oncogene tyrosine-protein kinase recep... 30 6.8
sp|Q9S3Q2|HTPG_PORGI Chaperone protein htpG OS=Porphyromonas gin... 30 6.8

>sp|O43379|WDR62_HUMAN WD repeat-containing protein 62 OS=Homo
sapiens GN=WDR62 PE=1 SV=2
Length = 1518

Score = 30.8 bits (68), Expect = 4.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1

Query: 76 VITCMLFTFDCMHLLEIELSCCIMI 2
+IT M FT+DC HL+ + C+ I
Sbjct: 717 IITSMKFTYDCHHLITVSGDSCVFI 741


>sp|Q8HXL3|WDR62_PIG WD repeat-containing protein 62 OS=Sus scrofa
GN=WDR62 PE=3 SV=1
Length = 1541

Score = 30.4 bits (67), Expect = 5.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1

Query: 76 VITCMLFTFDCMHLLEIELSCCIMI 2
+IT M FT+DC HL+ + C+ I
Sbjct: 717 IITGMKFTYDCRHLITVSGDSCVFI 741


>sp|Q8SSS9|QKGA_DICDI Probable serine/threonine-protein kinase qkgA
OS=Dictyostelium discoideum GN=qkgA-1 PE=3 SV=2
Length = 1553

Score = 30.4 bits (67), Expect = 5.2
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -2

Query: 480 SFVFLWQNLRKSGSNDG*FAFTASSTSTNFILWNSSSRVVQRMTGSKICINPESSKLSFS 301
S++ L Q L G+N G + + S+++++ L NSSS +T K SS L S
Sbjct: 629 SYIILEQRLSNRGANQGRMSISNSASNSSSSLLNSSSSSSPSLTSKK-----SSSHLKHS 683

Query: 300 KQ 295
+Q
Sbjct: 684 QQ 685


>sp|Q3U3T8|WDR62_MOUSE WD repeat-containing protein 62 OS=Mus
musculus GN=Wdr62 PE=2 SV=2
Length = 1523

Score = 30.0 bits (66), Expect = 6.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1

Query: 76 VITCMLFTFDCMHLLEIELSCCIMI 2
++T M FT+DC HL+ + C+ I
Sbjct: 717 IVTGMKFTYDCRHLITVSGDSCVFI 741


>sp|P07949|RET_HUMAN Proto-oncogene tyrosine-protein kinase receptor
ret OS=Homo sapiens GN=RET PE=1 SV=3
Length = 1114

Score = 30.0 bits (66), Expect = 6.8
Identities = 19/87 (21%), Positives = 40/87 (45%)
Frame = -2

Query: 516 LNTICQENCDHSSFVFLWQNLRKSGSNDG*FAFTASSTSTNFILWNSSSRVVQRMTGSKI 337
+ +C ENC S + + L SG+N S+ T+ IL+ + ++ ++R +++
Sbjct: 422 IGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFVNDTKALRRPKCAEL 481

Query: 336 CINPESSKLSFSKQWKNALLILDSNVY 256
++ S+Q + LL+ Y
Sbjct: 482 HYMVVATDQQTSRQAQAQLLVTVEGSY 508


>sp|Q9S3Q2|HTPG_PORGI Chaperone protein htpG OS=Porphyromonas
gingivalis GN=htpG PE=3 SV=1
Length = 684

Score = 30.0 bits (66), Expect = 6.8
Identities = 20/84 (23%), Positives = 41/84 (48%)
Frame = +2

Query: 164 IKQMEASGYSVLRTLSELEPNVAFTKKEHVVYTLESRINKAFFHCFENDSFDDSGLMQIL 343
+K+ GYSV+ +L+P H+V LE ++ K F ++D+ ++ ++
Sbjct: 438 VKRASDKGYSVMLLDGQLDP--------HIVSLLEQKLEKTHFVRVDSDTINN-----LI 484

Query: 344 DPVIRCTTRLEEFQRMKLVEVDDA 415
R +L + +R LV++ +A
Sbjct: 485 RKEERAEVKLSDTERATLVKLFEA 508


tr_hit_id A9T820
Definition tr|A9T820|A9T820_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 137
Score (bit) 162.0
E-value 1.0e-38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912553|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C05.
(517 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T820|A9T820_PHYPA Predicted protein OS=Physcomitrella paten... 162 1e-38
tr|Q9LNB2|Q9LNB2_ARATH F5O11.6 OS=Arabidopsis thaliana GN=At1g12... 71 4e-11
tr|A7QYT2|A7QYT2_VITVI Chromosome undetermined scaffold_254, who... 68 2e-10
tr|A5ASI1|A5ASI1_VITVI Putative uncharacterized protein OS=Vitis... 68 2e-10
tr|A7NZU9|A7NZU9_VITVI Chromosome chr6 scaffold_3, whole genome ... 59 1e-07
tr|Q0J0Q0|Q0J0Q0_ORYSJ Os09g0488800 protein OS=Oryza sativa subs... 57 5e-07
tr|B8BCW1|B8BCW1_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07
tr|A3C048|A3C048_ORYSJ Putative uncharacterized protein OS=Oryza... 57 5e-07
tr|Q338Y6|Q338Y6_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 55 2e-06
tr|Q0IY20|Q0IY20_ORYSJ Os10g0378400 protein OS=Oryza sativa subs... 55 2e-06
tr|A3C482|A3C482_ORYSJ Putative uncharacterized protein OS=Oryza... 55 2e-06
tr|A2Z6P2|A2Z6P2_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06
tr|Q9LXU9|Q9LXU9_ARATH Putative uncharacterized protein T24H18_7... 54 4e-06
tr|Q6YVT7|Q6YVT7_ORYSJ Os08g0508100 protein OS=Oryza sativa subs... 54 4e-06
tr|A3BUP2|A3BUP2_ORYSJ Putative uncharacterized protein OS=Oryza... 54 4e-06
tr|A2XIG7|A2XIG7_ORYSI Putative uncharacterized protein OS=Oryza... 54 4e-06
tr|A7PYD3|A7PYD3_VITVI Chromosome chr15 scaffold_37, whole genom... 52 1e-05
tr|B6TSF7|B6TSF7_MAIZE Putative uncharacterized protein OS=Zea m... 52 2e-05
tr|B7ZWV2|B7ZWV2_MAIZE Putative uncharacterized protein OS=Zea m... 51 3e-05
tr|O22146|O22146_ARATH Putative uncharacterized protein At2g4526... 50 7e-05
tr|A9RFE1|A9RFE1_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04
tr|B4FFJ2|B4FFJ2_MAIZE Putative uncharacterized protein OS=Zea m... 48 3e-04
tr|Q9SZA9|Q9SZA9_ARATH Putative uncharacterized protein F17M5.80... 47 4e-04
tr|B6SWW4|B6SWW4_MAIZE Putative uncharacterized protein OS=Zea m... 47 6e-04
tr|B4FCZ5|B4FCZ5_MAIZE Putative uncharacterized protein OS=Zea m... 47 6e-04
tr|Q8RYE3|Q8RYE3_ARATH Putative MYB family transcription factor ... 45 0.002
tr|O49496|O49496_ARATH Putative uncharacterized protein AT4g3408... 45 0.003
tr|Q9LZZ5|Q9LZZ5_ARATH Putative uncharacterized protein T4C21_90... 44 0.004
tr|B2ZAQ7|B2ZAQ7_GOSRA UNE1-like protein OS=Gossypium raimondii ... 43 0.011
tr|A7P221|A7P221_VITVI Chromosome chr19 scaffold_4, whole genome... 42 0.014

>tr|A9T820|A9T820_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_168564 PE=4 SV=1
Length = 519

Score = 162 bits (409), Expect = 1e-38
Identities = 73/137 (53%), Positives = 97/137 (70%)
Frame = +2

Query: 104 LFEMATMRARFSIRSFSKALIKQMEASGYSVLRTLSELEPNVAFTKKEHVVYTLESRINK 283
+FEMA RAR ++R F K + QME SGYSV RTL+ ++ + F K+EH + LE+ INK
Sbjct: 260 VFEMACTRARVAVRYFCKVFMMQMEYSGYSVCRTLASIDASAKFMKREHTSFALEANINK 319

Query: 284 AFFHCFENDSFDDSGLMQILDPVIRCTTRLEEFQRMKLVEVDDAVNANHPSFDPDFRRFC 463
A +HCFENDSFDD+GL I+DP RC R EEFQR++LV+ DA N H F+P+F FC
Sbjct: 320 ALYHCFENDSFDDTGLTLIIDPKERCAARFEEFQRLRLVDSVDAANTAHADFEPNFLAFC 379

Query: 464 QRKTKELWSQFSWHIVF 514
++K +E+W F W+IVF
Sbjct: 380 EQKMREIWFLFPWNIVF 396


>tr|Q9LNB2|Q9LNB2_ARATH F5O11.6 OS=Arabidopsis thaliana GN=At1g12330
PE=4 SV=1
Length = 505

Score = 70.9 bits (172), Expect = 4e-11
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Frame = +2

Query: 107 FEMATMRARFSIRSFSKALIKQMEASGYSVLRTLS------ELEPNVAFTKKEHVVYTLE 268
F ++ +R SIR+ S++L Q+ G V LS +++ N + +++ LE
Sbjct: 252 FLVSVSESRSSIRALSRSLASQLRTVGGKVYERLSLLLQPFDVKINSFAKNPKSLIFYLE 311

Query: 269 SRINKAFFHCFENDSFDDSGLMQILDPVIRCTTRLEEFQRMKLVEVDDAVNANHPSFDPD 448
+ +++AFF FE F +G +IL+P+ RC + F + + D+ ++ F +
Sbjct: 312 AILSRAFFEDFEAPGFQKNGSTRILNPIDRCESNYASFNVLMELTWDEVLSRGTKHFSEE 371

Query: 449 FRRFCQRKTKELWSQFSWH 505
F RFC RK ++ S SW+
Sbjct: 372 FSRFCDRKMSDVVSMLSWN 390


>tr|A7QYT2|A7QYT2_VITVI Chromosome undetermined scaffold_254, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00010316001 PE=4 SV=1
Length = 480

Score = 68.2 bits (165), Expect = 2e-10
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Frame = +2

Query: 107 FEMATMRARFSIRSFSKALIKQMEASGYSVLRTLSEL----EPNVAFTKKEHVVYT-LES 271
F +A AR SIR S++L Q+ G V +S L + ++ +K + LE+
Sbjct: 240 FLVAVSEARSSIRLLSRSLTLQLRQIGGKVYERISLLLQPYDVKLSLSKNPRTLLVYLEA 299

Query: 272 RINKAFFHCFENDSFDDSGLMQILDPVIRCTTRLEEFQRMKLVEVDDAVNANHPSFDPDF 451
++KAFF FE+ F + QIL+P+ RC F ++ + D+ +N F +F
Sbjct: 300 LLSKAFFEDFESVGFQKNASNQILNPIERCEANYASFNILQGLTWDEVLNKGTRHFSEEF 359

Query: 452 RRFCQRKTKELWSQFSWH 505
+FC RK E+ + +W+
Sbjct: 360 SKFCDRKMSEIVAMLAWN 377


>tr|A5ASI1|A5ASI1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_040048 PE=4 SV=1
Length = 589

Score = 68.2 bits (165), Expect = 2e-10
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Frame = +2

Query: 107 FEMATMRARFSIRSFSKALIKQMEASGYSVLRTLSEL----EPNVAFTKKEHVVYT-LES 271
F +A AR SIR S++L Q+ G V +S L + ++ +K + LE+
Sbjct: 240 FLVAVSEARSSIRLLSRSLTLQLRQIGGKVYERISLLLQPYDVKLSLSKNPRTLLVYLEA 299

Query: 272 RINKAFFHCFENDSFDDSGLMQILDPVIRCTTRLEEFQRMKLVEVDDAVNANHPSFDPDF 451
++KAFF FE+ F + QIL+P+ RC F ++ + D+ +N F +F
Sbjct: 300 LLSKAFFEDFESVGFQKNASNQILNPIERCEANYASFNILQGLTWDEVLNKGTRHFSEEF 359

Query: 452 RRFCQRKTKELWSQFSWH 505
+FC RK E+ + +W+
Sbjct: 360 SKFCDRKMSEIVAMLAWN 377


>tr|A7NZU9|A7NZU9_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024655001
PE=4 SV=1
Length = 579

Score = 58.9 bits (141), Expect = 1e-07
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Frame = +2

Query: 107 FEMATMRARFSIRSFSKALIKQMEASGYSVLRTLSEL-EP-NVAFTKK--EHVVYTLESR 274
F AR S++ F K LI Q+E S ++ L+ L +P ++ T K + V+Y LE+
Sbjct: 352 FLQIVSEARLSVKQFCKILIGQIEESDNTLTDNLNSLLQPYKLSLTSKYSKAVLYHLEAI 411

Query: 275 INKAFFHCFENDSFDDSGLMQILDPVIRCTTRLEEFQRMKLVEVDDAVNANHPSFDPDFR 454
IN++ + FEN F +G ++LDP R F ++ + ++ + + +F
Sbjct: 412 INQSLYQDFENCVFQKNGTAKLLDPHQDRQARFSSFVALRNLSWNEVLRKGTKYYSEEFS 471

Query: 455 RFCQRKTKELWSQFSW 502
+FC +K + S +W
Sbjct: 472 KFCDQKMSCIISTLNW 487


>tr|Q0J0Q0|Q0J0Q0_ORYSJ Os09g0488800 protein OS=Oryza sativa subsp.
japonica GN=Os09g0488800 PE=4 SV=1
Length = 610

Score = 57.0 bits (136), Expect = 5e-07
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Frame = +2

Query: 107 FEMATMRARFSIRSFSKALIKQMEASGYSVLRTLSEL-EP-NVAFTKKEH----VVYTLE 268
F AR S++ F KALI+Q+E ++ L+ L +P + T +H V+Y LE
Sbjct: 385 FLQIASEARLSVKQFCKALIQQVEEPDNGLIEKLNILLQPYQLMITDNKHCSKLVLYHLE 444

Query: 269 SRINKAFFHCFENDSFDDSGLMQILDPVIRCTTRLEEFQRMKLVEVDDAVNANHPSFDPD 448
+ +N+A + FEN +F +G + LDP F ++ + ++ + + D
Sbjct: 445 ALMNQAMYQDFENCTFQKNGSPRCLDPKQGSQESFASFVALRNLSWNEVLRKGTKYYSED 504

Query: 449 FRRFCQRK 472
F RFC +K
Sbjct: 505 FSRFCDQK 512


>tr|B8BCW1|B8BCW1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31846 PE=4 SV=1
Length = 587

Score = 57.0 bits (136), Expect = 5e-07
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Frame = +2

Query: 107 FEMATMRARFSIRSFSKALIKQMEASGYSVLRTLSEL-EP-NVAFTKKEH----VVYTLE 268
F AR S++ F KALI+Q+E ++ L+ L +P + T +H V+Y LE
Sbjct: 385 FLQIASEARLSVKQFCKALIQQVEEPDNGLIEKLNILLQPYQLMITDNKHCSKLVLYHLE 444

Query: 269 SRINKAFFHCFENDSFDDSGLMQILDPVIRCTTRLEEFQRMKLVEVDDAVNANHPSFDPD 448
+ +N+A + FEN +F +G + LDP F ++ + ++ + + D
Sbjct: 445 ALMNQAMYQDFENCTFQKNGSPRCLDPKQGSQESFASFVALRNLSWNEVLRKGTKYYSED 504

Query: 449 FRRFCQRK 472
F RFC +K
Sbjct: 505 FSRFCDQK 512


>tr|A3C048|A3C048_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_028670 PE=4 SV=1
Length = 557

Score = 57.0 bits (136), Expect = 5e-07
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Frame = +2

Query: 107 FEMATMRARFSIRSFSKALIKQMEASGYSVLRTLSEL-EP-NVAFTKKEH----VVYTLE 268
F AR S++ F KALI+Q+E ++ L+ L +P + T +H V+Y LE
Sbjct: 332 FLQIASEARLSVKQFCKALIQQVEEPDNGLIEKLNILLQPYQLMITDNKHCSKLVLYHLE 391

Query: 269 SRINKAFFHCFENDSFDDSGLMQILDPVIRCTTRLEEFQRMKLVEVDDAVNANHPSFDPD 448
+ +N+A + FEN +F +G + LDP F ++ + ++ + + D
Sbjct: 392 ALMNQAMYQDFENCTFQKNGSPRCLDPKQGSQESFASFVALRNLSWNEVLRKGTKYYSED 451

Query: 449 FRRFCQRK 472
F RFC +K
Sbjct: 452 FSRFCDQK 459


>tr|Q338Y6|Q338Y6_ORYSJ Expressed protein OS=Oryza sativa subsp.
japonica GN=LOC_Os10g23220 PE=4 SV=1
Length = 422

Score = 55.1 bits (131), Expect = 2e-06
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Frame = +2

Query: 20 ELNFKQMHAIKCEEHAGNDKGSTMATLL---LFEMATMRARFSIRSFSKALIKQMEASGY 190
E KQ + E +D+ + + L LF A A SI FSK LI M+A+G+
Sbjct: 156 EKKLKQRGLLNKESEESDDEDNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKAAGW 215

Query: 191 SVLRTLSELEPNVAFTKKEHVVYTLESRINKAFFHCFENDSFDDSGLMQILDPVIRCTTR 370
+ + +EP V +T++ H Y ES I + F F+ +SF ++ + +
Sbjct: 216 DLDAAANAIEPAVVYTRRAHKKYAFESYICQRMFGGFQEESFS----VKAANITVSNEAF 271

Query: 371 LEEFQRMKLVEVDDAVNANHPSFDPDFRRFCQRK 472
+F ++ ++ D ++ N D F +FC+ K
Sbjct: 272 FHQFLAVRAMDPLDVLSQNP---DSVFGKFCRSK 302


>tr|Q0IY20|Q0IY20_ORYSJ Os10g0378400 protein OS=Oryza sativa subsp.
japonica GN=Os10g0378400 PE=4 SV=1
Length = 338

Score = 55.1 bits (131), Expect = 2e-06
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Frame = +2

Query: 20 ELNFKQMHAIKCEEHAGNDKGSTMATLL---LFEMATMRARFSIRSFSKALIKQMEASGY 190
E KQ + E +D+ + + L LF A A SI FSK LI M+A+G+
Sbjct: 72 EKKLKQRGLLNKESEESDDEDNYFSIELTPSLFTSAVDNAYQSIHDFSKPLINMMKAAGW 131

Query: 191 SVLRTLSELEPNVAFTKKEHVVYTLESRINKAFFHCFENDSFDDSGLMQILDPVIRCTTR 370
+ + +EP V +T++ H Y ES I + F F+ +SF ++ + +
Sbjct: 132 DLDAAANAIEPAVVYTRRAHKKYAFESYICQRMFGGFQEESFS----VKAANITVSNEAF 187

Query: 371 LEEFQRMKLVEVDDAVNANHPSFDPDFRRFCQRK 472
+F ++ ++ D ++ N D F +FC+ K
Sbjct: 188 FHQFLAVRAMDPLDVLSQNP---DSVFGKFCRSK 218