BP912554 |
Clone id |
YMU001_000020_C06 |
Library |
YMU01 |
Length |
513 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000020_C06. |
Accession |
BP912554 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACATCATCCAAGAGATTAAGTATTTGAGGAGAGATAAGGAGGATCCTGAAATGTGGAAT AAGGAGAGGGAGAAGGCAGTGGAGAAGGCCAAGATAGGCTTCACAGCAAGAGTTGAGGCT ACCTTGAGACAGGTAAAGCATAAACTGTCGCATCGAAGACATAGCCATGGATCGCATGAG CTATAGCAGAGCCAGGTATCAACAATGCAACTGGAGGAGCAAGAAGCTATAGAAGGAAAT GGACATAGTACAAAACAAATTGTGCTGCCACATTTCCTACAGTTTTGAAGAAAGAATTAT TGAAGGAACAAATAGATACCATTATACCTTTGCTAATGGGCTATACGTCAGAACCTTACT TACTGCCCATTTAATCCTCTCGTGGGCATTGTGTACATAGCAAATTGGCTTTCCCCCCTT TTGCAGATTAGAACACCATCCATTTTTAAGCCATGAATTCATGGTGAGTGATTTTNAGGG AAGTTTGAGGTCCTTCCCATTATAGTGAGAGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LNQ4 |
Definition |
sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana |
Align length |
53 |
Score (bit) |
69.7 |
E-value |
8.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5Z656 |
Definition |
tr|Q5Z656|Q5Z656_ORYSJ Putative ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 OS=Oryza sativa subsp. japonica |
Align length |
59 |
Score (bit) |
68.9 |
E-value |
1.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912554|Adiantum capillus-veneris mRNA, clone: YMU001_000020_C06. (513 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5Z656|Q5Z656_ORYSJ Putative ATPase, aminophospholipid transp... 69 1e-10 tr|Q0DBG8|Q0DBG8_ORYSJ Os06g0565900 protein (Fragment) OS=Oryza ... 69 1e-10 tr|B8B3T2|B8B3T2_ORYSI Putative uncharacterized protein OS=Oryza... 69 1e-10 tr|A3BCV4|A3BCV4_ORYSJ Putative uncharacterized protein OS=Oryza... 69 1e-10 tr|A7P6M9|A7P6M9_VITVI Chromosome chr9 scaffold_7, whole genome ... 67 4e-10 tr|A9RVW0|A9RVW0_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05 tr|A7QCR8|A7QCR8_VITVI Chromosome undetermined scaffold_79, whol... 52 2e-05 tr|A5B8B8|A5B8B8_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A9SY94|A9SY94_PHYPA Predicted protein OS=Physcomitrella paten... 48 3e-04 tr|Q23G63|Q23G63_TETTH Putative uncharacterized protein OS=Tetra... 39 0.11 tr|A7S6R9|A7S6R9_NEMVE Predicted protein OS=Nematostella vectens... 37 0.43 tr|A9UXS7|A9UXS7_MONBE Predicted protein OS=Monosiga brevicollis... 37 0.74 tr|Q9FVR4|Q9FVR4_ARATH Putative uncharacterized protein F3C3.3 (... 35 1.6 tr|A8MRN1|A8MRN1_ARATH Uncharacterized protein At1g32190.2 OS=Ar... 35 1.6 tr|O96282|O96282_PLAF7 Putative uncharacterized protein PFB0950w... 35 1.6 tr|A9V5L8|A9V5L8_MONBE Predicted protein OS=Monosiga brevicollis... 35 1.6 tr|Q234V3|Q234V3_TETTH Putative uncharacterized protein OS=Tetra... 35 2.1 tr|Q20000|Q20000_CAEEL Putative uncharacterized protein OS=Caeno... 35 2.1 tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena ... 35 2.8 tr|B6PG39|B6PG39_BRAFL Putative uncharacterized protein (Fragmen... 35 2.8 tr|B8A3G2|B8A3G2_MAIZE Putative uncharacterized protein OS=Zea m... 34 3.7 tr|B6UAE5|B6UAE5_MAIZE Keratin-associated protein 5-4 OS=Zea may... 34 3.7 tr|Q22Z16|Q22Z16_TETTH Zinc finger domain, LSD1 subclass family ... 34 3.7 tr|Q22EI9|Q22EI9_TETTH Putative uncharacterized protein OS=Tetra... 34 3.7 tr|Q22D56|Q22D56_TETTH Insect antifreeze protein OS=Tetrahymena ... 34 3.7 tr|A0CI61|A0CI61_PARTE Chromosome undetermined scaffold_189, who... 34 3.7 tr|B5JNJ0|B5JNJ0_9BACT Putative uncharacterized protein OS=Verru... 34 4.8 tr|Q23QA1|Q23QA1_TETTH Putative uncharacterized protein OS=Tetra... 34 4.8 tr|Q234V4|Q234V4_TETTH Putative uncharacterized protein OS=Tetra... 34 4.8 tr|Q22Z14|Q22Z14_TETTH Zinc finger domain, LSD1 subclass family ... 34 4.8
>tr|Q5Z656|Q5Z656_ORYSJ Putative ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 OS=Oryza sativa subsp. japonica GN=P0567G03.5 PE=4 SV=1 Length = 1222
Score = 68.9 bits (167), Expect = 1e-10 Identities = 31/59 (52%), Positives = 43/59 (72%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEATLRQVKHKLSHRRHSHGSH 177 H+IQEIKYL++D ED MW +ER KA ++ KIGFTARV+A ++Q++ KL + S H Sbjct: 1161 HVIQEIKYLKKDVEDQTMWKRERSKARQRTKIGFTARVDAKIKQIRGKLHKKAPSLTIH 1219
>tr|Q0DBG8|Q0DBG8_ORYSJ Os06g0565900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0565900 PE=4 SV=1 Length = 652
Score = 68.9 bits (167), Expect = 1e-10 Identities = 31/59 (52%), Positives = 43/59 (72%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEATLRQVKHKLSHRRHSHGSH 177 H+IQEIKYL++D ED MW +ER KA ++ KIGFTARV+A ++Q++ KL + S H Sbjct: 591 HVIQEIKYLKKDVEDQTMWKRERSKARQRTKIGFTARVDAKIKQIRGKLHKKAPSLTIH 649
>tr|B8B3T2|B8B3T2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23406 PE=4 SV=1 Length = 1222
Score = 68.9 bits (167), Expect = 1e-10 Identities = 31/59 (52%), Positives = 43/59 (72%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEATLRQVKHKLSHRRHSHGSH 177 H+IQEIKYL++D ED MW +ER KA ++ KIGFTARV+A ++Q++ KL + S H Sbjct: 1161 HVIQEIKYLKKDVEDQTMWKRERSKARQRTKIGFTARVDAKIKQIRGKLHKKAPSLTIH 1219
>tr|A3BCV4|A3BCV4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_020876 PE=4 SV=1 Length = 1165
Score = 68.9 bits (167), Expect = 1e-10 Identities = 31/59 (52%), Positives = 43/59 (72%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEATLRQVKHKLSHRRHSHGSH 177 H+IQEIKYL++D ED MW +ER KA ++ KIGFTARV+A ++Q++ KL + S H Sbjct: 1104 HVIQEIKYLKKDVEDQTMWKRERSKARQRTKIGFTARVDAKIKQIRGKLHKKAPSLTIH 1162
>tr|A7P6M9|A7P6M9_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034132001 PE=4 SV=1 Length = 1085
Score = 67.4 bits (163), Expect = 4e-10 Identities = 32/55 (58%), Positives = 43/55 (78%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEATLRQVKHKLSHRRHS 165 HIIQEIKY R+D ED MW +ER KA ++ KIGF+ARV+A +RQ++ KL ++HS Sbjct: 1021 HIIQEIKYYRKDVEDQYMWTRERSKARQETKIGFSARVDAKIRQLRGKL-QKKHS 1074
>tr|A9RVW0|A9RVW0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_205967 PE=4 SV=1 Length = 1219
Score = 52.8 bits (125), Expect = 1e-05 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEA--TLRQVKHKLSHRRHSHGS 174 H+IQEI YL++ DP+M+ +ER KAV+K GF++RV+A T+++ K + H G+ Sbjct: 1126 HLIQEIHYLQKHITDPDMYKQERTKAVQKTHQGFSSRVKASMTMQETKQRFYGDGHLQGT 1185
Query: 175 HE 180 E Sbjct: 1186 SE 1187
>tr|A7QCR8|A7QCR8_VITVI Chromosome undetermined scaffold_79, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035521001 PE=4 SV=1 Length = 1147
Score = 51.6 bits (122), Expect = 2e-05 Identities = 21/53 (39%), Positives = 36/53 (67%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEATLRQVKHKLSHRR 159 H+IQE+K+ R+D D MW +E+ + +GF+ARVEA + ++K +L H++ Sbjct: 1094 HVIQEMKHFRKDIMDNAMWLREQNNSKTTTHVGFSARVEAKISRLKQQLHHKK 1146
>tr|A5B8B8|A5B8B8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010090 PE=4 SV=1 Length = 1399
Score = 51.6 bits (122), Expect = 2e-05 Identities = 21/53 (39%), Positives = 36/53 (67%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEATLRQVKHKLSHRR 159 H+IQE+K+ R+D D MW +E+ + +GF+ARVEA + ++K +L H++ Sbjct: 1346 HVIQEMKHFRKDIMDNAMWLREQNNSKTXTHVGFSARVEAKISRLKQQLHHKK 1398
>tr|A9SY94|A9SY94_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189702 PE=4 SV=1 Length = 1251
Score = 47.8 bits (112), Expect = 3e-04 Identities = 22/42 (52%), Positives = 31/42 (73%) Frame = +1
Query: 1 HIIQEIKYLRRDKEDPEMWNKEREKAVEKAKIGFTARVEATL 126 H+IQEI YL++ DP+M+ +ER KAVEK G ++RV A+L Sbjct: 1156 HLIQEIHYLQKHITDPDMYKQERTKAVEKTHQGVSSRVRASL 1197
>tr|Q23G63|Q23G63_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00077010 PE=4 SV=2 Length = 4051
Score = 39.3 bits (90), Expect = 0.11 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%) Frame = -2
Query: 281 CRKCGSTICFVLCPF-PSI--ASCSSSCIVDTWLCYSSCDPW---------LCLRCDSLC 138 C KC + C P+ P+I SCSS + C SCDP C CD+ C Sbjct: 583 CDKCDNN-CLTCSPYGPAIDCQSCSSPLFLKNKRCVKSCDPIGEYGDQNTRQCTACDTTC 641
Query: 137 FTCLKVAST 111 +TC++ +T Sbjct: 642 YTCIQKTNT 650
Score = 35.4 bits (80), Expect = 1.6 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 9/47 (19%) Frame = -2
Query: 242 PFPSIASCSSSCIVDTWLCYSSCDP---------WLCLRCDSLCFTC 129 P S SCSS + ++ C SSC+P C CD+ C+TC Sbjct: 2511 PSTSCLSCSSPLFLKSFTCISSCNPIGEYGDTNTRKCTPCDNSCYTC 2557
Score = 33.9 bits (76), Expect = 4.8 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 11/68 (16%) Frame = -2
Query: 287 QNCRKCGSTICFVLCPFPSIAS-C--SSSCIVDTWLCYSSC--------DPWLCLRCDSL 141 + C+KC S L P+ S C S ++T C + C + W C CD+ Sbjct: 386 KKCKKCDSNCLQCLDNQPTFCSKCVNGSFLTINTGKCVADCGIGQWGRSNDWSCQLCDNT 445
Query: 140 CFTCLKVA 117 C+TC+ A Sbjct: 446 CYTCVNNA 453
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