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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912556
Clone id YMU001_000020_C08
Library
Length 131
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTACTCGAAGGATGGTGCAGATTTAGCGTGCAAGAGATGAATGCAAGGGGCCCTTATAAT
ACTGCTCTAGTGGAACAGTTGGACATGACACGAGCTGAGATGGATCAAGCGGAAAGGGAT
CCTGAGGTGCA
■■Homology search results ■■ -
sp_hit_id P93647
Definition sp|P93647|LONH1_MAIZE Lon protease homolog 1, mitochondrial OS=Zea mays
Align length 43
Score (bit) 65.1
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912556|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C08.
         (131 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P93647|LONH1_MAIZE Lon protease homolog 1, mitochondrial OS=Z...    65   1e-10
sp|O04979|LONH1_SPIOL Lon protease homolog 1, mitochondrial OS=S...    57   4e-08
sp|O64948|LONH1_ARATH Lon protease homolog 1, mitochondrial OS=A...    53   4e-07
sp|Q2TAF8|LONP2_XENLA Peroxisomal Lon protease homolog 2 OS=Xeno...    29   6.4  

>sp|P93647|LONH1_MAIZE Lon protease homolog 1, mitochondrial OS=Zea
           mays GN=LON1 PE=2 SV=1
          Length = 885

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 28/43 (65%), Positives = 38/43 (88%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSVQE++ARGPY+ A V +LDMT+ E++QAE+DP++
Sbjct: 135 VLEGLCRFSVQELSARGPYHVARVSRLDMTKTELEQAEQDPDL 177


>sp|O04979|LONH1_SPIOL Lon protease homolog 1, mitochondrial
           OS=Spinacia oleracea PE=2 SV=1
          Length = 875

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 24/42 (57%), Positives = 34/42 (80%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPE 126
           VLEG CRF V E+N+RG Y TA +  LD+T+A+M+QA++DP+
Sbjct: 135 VLEGLCRFRVMELNSRGNYYTARISPLDITKADMEQAQQDPD 176


>sp|O64948|LONH1_ARATH Lon protease homolog 1, mitochondrial
           OS=Arabidopsis thaliana GN=LON PE=2 SV=1
          Length = 888

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 22/42 (52%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPE 126
           VLEG  RF+VQE+  RGPY+ A +  L+MT+AE++Q ++DP+
Sbjct: 134 VLEGLSRFNVQELGKRGPYSVARITSLEMTKAELEQVKQDPD 175


>sp|Q2TAF8|LONP2_XENLA Peroxisomal Lon protease homolog 2 OS=Xenopus
           laevis GN=lonp2 PE=2 SV=1
          Length = 856

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLD 84
           ++ G CRF + E+    PY  A VEQLD
Sbjct: 101 LVTGLCRFQITEILKERPYPVAEVEQLD 128
tr_hit_id B4F8P5
Definition tr|B4F8P5|B4F8P5_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 43
Score (bit) 65.1
E-value 2.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912556|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C08.
         (131 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4F8P5|B4F8P5_MAIZE Putative uncharacterized protein OS=Zea m...    65   2e-09
tr|Q6RS97|Q6RS97_WHEAT Lon protease homolog OS=Triticum aestivum...    63   8e-09
tr|Q94F60|Q94F60_9POAL Lon protease homolog OS=Dichanthelium lan...    62   1e-08
tr|Q8GV57|Q8GV57_ORYSI Lon protease homolog OS=Oryza sativa subs...    60   5e-08
tr|Q69SH2|Q69SH2_ORYSJ Lon protease homolog OS=Oryza sativa subs...    60   5e-08
tr|Q0J032|Q0J032_ORYSJ Lon protease homolog OS=Oryza sativa subs...    60   5e-08
tr|B8BDV1|B8BDV1_ORYSI Putative uncharacterized protein OS=Oryza...    60   5e-08
tr|A3C0Y0|A3C0Y0_ORYSJ Lon protease homolog OS=Oryza sativa subs...    60   5e-08
tr|A7PCG5|A7PCG5_VITVI Chromosome chr2 scaffold_11, whole genome...    59   1e-07
tr|A5BU86|A5BU86_VITVI Lon protease homolog OS=Vitis vinifera GN...    59   1e-07
tr|A9RUE2|A9RUE2_PHYPA Predicted protein OS=Physcomitrella paten...    57   6e-07

>tr|B4F8P5|B4F8P5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 514

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 28/43 (65%), Positives = 38/43 (88%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSVQE++ARGPY+ A V +LDMT+ E++QAE+DP++
Sbjct: 135 VLEGLCRFSVQELSARGPYHVARVSRLDMTKTELEQAEQDPDL 177


>tr|Q6RS97|Q6RS97_WHEAT Lon protease homolog OS=Triticum aestivum
           PE=2 SV=1
          Length = 886

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 27/43 (62%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSV+E+NARG Y+ A V +LDMT+ E++QAE+DP++
Sbjct: 136 VLEGLCRFSVEELNARGSYHVARVSRLDMTKTELEQAEQDPDL 178


>tr|Q94F60|Q94F60_9POAL Lon protease homolog OS=Dichanthelium
           lanuginosum GN=lon PE=2 SV=1
          Length = 884

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 27/43 (62%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSVQE++ARG Y+ A V +LDMT+ E++QAE+DP++
Sbjct: 134 VLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEQAEQDPDL 176


>tr|Q8GV57|Q8GV57_ORYSI Lon protease homolog OS=Oryza sativa subsp.
           indica GN=Lon1 PE=2 SV=1
          Length = 884

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSVQE++ARG Y+ A V +LDMT+ E++ AE+DP++
Sbjct: 134 VLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDL 176


>tr|Q69SH2|Q69SH2_ORYSJ Lon protease homolog OS=Oryza sativa subsp.
           japonica GN=OJ1112_E07.9 PE=3 SV=1
          Length = 880

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSVQE++ARG Y+ A V +LDMT+ E++ AE+DP++
Sbjct: 134 VLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDL 176


>tr|Q0J032|Q0J032_ORYSJ Lon protease homolog OS=Oryza sativa subsp.
           japonica GN=Os09g0533400 PE=3 SV=1
          Length = 884

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSVQE++ARG Y+ A V +LDMT+ E++ AE+DP++
Sbjct: 134 VLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDL 176


>tr|B8BDV1|B8BDV1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32159 PE=4 SV=1
          Length = 884

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSVQE++ARG Y+ A V +LDMT+ E++ AE+DP++
Sbjct: 134 VLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDL 176


>tr|A3C0Y0|A3C0Y0_ORYSJ Lon protease homolog OS=Oryza sativa subsp.
           japonica GN=OsJ_028952 PE=3 SV=1
          Length = 850

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPEV 129
           VLEG CRFSVQE++ARG Y+ A V +LDMT+ E++ AE+DP++
Sbjct: 134 VLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDL 176


>tr|A7PCG5|A7PCG5_VITVI Chromosome chr2 scaffold_11, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015853001
           PE=4 SV=1
          Length = 286

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPE 126
           VLEG CRFSVQE++ RG Y TA +  LDM + EM+Q E+DPE
Sbjct: 135 VLEGLCRFSVQELSTRGTYYTARISSLDMNKTEMEQVEQDPE 176


>tr|A5BU86|A5BU86_VITVI Lon protease homolog OS=Vitis vinifera
           GN=VITISV_034238 PE=3 SV=1
          Length = 904

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   VLEGWCRFSVQEMNARGPYNTALVEQLDMTRAEMDQAERDPE 126
           VLEG CRFSVQE++ RG Y TA +  LDM + EM+Q E+DPE
Sbjct: 151 VLEGLCRFSVQELSTRGTYYTARISSLDMNKTEMEQVEQDPE 192