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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912558
Clone id YMU001_000020_C10
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_C10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACGCGCTTGCTCGCTGGTGACTTACATTTCACGCTCCCCAGCCTCCTTCTCAGCAGGCTA
GGGTTTTCTTCTAGGTCAGTACGCTCACCTCCTTCCTTCTTCTTCGTGCTCTGTTTATAT
AAGCTTTCCATGGCCTTTCCCTCGTAATTGGCAGTTTTCTATCAGCGTCTGTTTGTCTCC
GTGTTCAGACTCTGGTAAGAATTCAGTCTTCCTCTTGGATGTGGGAAGTTAAGCTCCTTT
GACACAGTAAATACTTGCGTTTCTTCTGCCTTCGGTTTCTTCTTCACATTACAAATTTAT
GTTATGGTTTTAAGCCTTCCTTGTTGCAGGCTTTTGTTTTTCCCCTTGAATTTTACAATG
TGATTATCATACTTATCCATTCTTCTGTCTCCATAGCCATGGCCACTCCTAACACACAGA
CAGTGGTTCTACAAAACGCCTTTCTCCCTGTTGTTCTTCAGTCATTTCTGGCAGACATTT
GCAGCAAGGCGTTGCTAACGCTTGTCCAAAGTGGTTGCGTTCTAAAGGGTAGCTGTGG
■■Homology search results ■■ -
sp_hit_id Q6DRL5
Definition sp|Q6DRL5|MBB1A_DANRE Myb-binding protein 1A-like protein OS=Danio rerio
Align length 82
Score (bit) 33.1
E-value 0.87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912558|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C10.
         (538 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6DRL5|MBB1A_DANRE Myb-binding protein 1A-like protein OS=Dan...    33   0.87 
sp|Q3MJ16|PA24E_HUMAN Cytosolic phospholipase A2 epsilon OS=Homo...    31   4.4  
sp|P21299|PHOSP_SYNV Phosphoprotein OS=Sonchus yellow net virus ...    30   5.7  
sp|Q6NV26|SDA1_DANRE Protein SDA1 homolog OS=Danio rerio GN=sdad...    30   9.7  

>sp|Q6DRL5|MBB1A_DANRE Myb-binding protein 1A-like protein OS=Danio
            rerio GN=mybbp1a PE=1 SV=1
          Length = 1269

 Score = 33.1 bits (74), Expect = 0.87
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = -3

Query: 287  VKKKPKAEETQVFTVSKELNFPHPRGRLNS-----YQSLNTETN-RR**KTANYEGKAME 126
            VKK P+AE+T+  T  K+   P  + R N       +   TET   +  + A+ EGK  +
Sbjct: 1163 VKKVPEAEQTEETTKKKKGFLPETKKRKNRKKPTILEGKETETPVEKTPEGASGEGKKNK 1222

Query: 125  SLYKQSTKKKEGGERTDLEENP 60
            +  K   +K++ GE T  +  P
Sbjct: 1223 NKKKNKKRKQQAGEETQDQPTP 1244


>sp|Q3MJ16|PA24E_HUMAN Cytosolic phospholipase A2 epsilon OS=Homo
           sapiens GN=PLA2G4E PE=1 SV=2
          Length = 838

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 210 KTEFLPESEHGDKQTLIENCQLRGKGHGKLI*TEHEEEGRR 88
           + EFL E      +TL+ N  L  +GHG L+ +  +++GR+
Sbjct: 163 EVEFLLEESPSPPETLVTNGVLVSRGHGWLLLSGEQDQGRK 203


>sp|P21299|PHOSP_SYNV Phosphoprotein OS=Sonchus yellow net virus
           GN=P PE=2 SV=1
          Length = 286

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 404 GHGYGDRRMDKYDNHIVKFKGKNKSLQQGRLKTI 303
           GHG+GD+  +K    +V+ +   K +  GR K +
Sbjct: 213 GHGHGDKNNEKNSGKVVRKRKSRKEIDVGRFKMV 246


>sp|Q6NV26|SDA1_DANRE Protein SDA1 homolog OS=Danio rerio GN=sdad1
           PE=2 SV=1
          Length = 682

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
 Frame = -3

Query: 326 QQGRLKTIT*ICNVKKKPKAE-ETQVFTV----SKELNFPHPRGRLNSYQSLNTETNRR* 162
           ++G L ++  I  + KKPK++ ET++ T     +    F   RG+LN Y S + +  +R 
Sbjct: 585 ERGELLSLRDIERLHKKPKSDKETRLATAMAGRTDRKEFTKKRGKLNPYASTSNKEKKR- 643

Query: 161 *KTANYEGKAMESLYKQSTKKKEGGERTDLEENPSLLRRR 42
               N+    M       TK K       +    SLL++R
Sbjct: 644 --KKNF--MMMRHSQNVRTKGKRSFREKQIALRDSLLKKR 679
tr_hit_id A7SV03
Definition tr|A7SV03|A7SV03_NEMVE Predicted protein OS=Nematostella vectensis
Align length 123
Score (bit) 35.0
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912558|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C10.
         (538 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7SV03|A7SV03_NEMVE Predicted protein OS=Nematostella vectens...    35   2.5  
tr|B5FEP2|B5FEP2_VIBFM Hypothetical cytosolic protein OS=Vibrio ...    35   3.2  
tr|Q5E4Q6|Q5E4Q6_VIBF1 Hypothetical cytosolic protein OS=Vibrio ...    34   4.2  
tr|Q7ZVK6|Q7ZVK6_DANRE Ubiquitin carboxyl-terminal hydrolase OS=...    34   5.5  
tr|B8MDP2|B8MDP2_9EURO Putative uncharacterized protein OS=Talar...    33   7.2  
tr|B6KCG9|B6KCG9_TOXGO Putative uncharacterized protein OS=Toxop...    33   9.5  

>tr|A7SV03|A7SV03_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g217884 PE=4 SV=1
          Length = 790

 Score = 35.0 bits (79), Expect = 2.5
 Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
 Frame = -3

Query: 419 LCVRSGHGYGDRRMDKYDNHIVKFKGKNKSLQQGRLKTIT*ICNVKKKPK---AEETQVF 249
           L   +GH Y +RR+  Y   +  F  K  +L+    K+   I N++  PK   A   +  
Sbjct: 198 LASENGHMYCERRLWLYQLSLNAFNEKRDNLES--RKSQESIDNLRLSPKKSLAFRAKER 255

Query: 248 TVSKELNFPHPRGRLNSYQSLNTETNRR**KTANYEGKAMESLYKQSTKKKEGGERTDLE 69
             SKEL+F  PR +L+S  + +T  + +    + +    +   Y++  +  E     D++
Sbjct: 256 LDSKELHFHLPRVQLSSGSTTSTPVHHKPAPRSQFPLMQIAEKYRKELQIIENSSIPDVQ 315

Query: 68  ENP 60
           E P
Sbjct: 316 EGP 318


>tr|B5FEP2|B5FEP2_VIBFM Hypothetical cytosolic protein OS=Vibrio
           fischeri (strain MJ11) GN=VFMJ11_1588 PE=4 SV=1
          Length = 560

 Score = 34.7 bits (78), Expect = 3.2
 Identities = 26/94 (27%), Positives = 40/94 (42%)
 Frame = -3

Query: 383 RMDKYDNHIVKFKGKNKSLQQGRLKTIT*ICNVKKKPKAEETQVFTVSKELNFPHPRGRL 204
           R DKY  +IV    K K  Q+  +K +    ++ K PKAE T                ++
Sbjct: 426 RFDKYKENIVALNAKYKEAQENTMKVVRAEMDLAKIPKAERTP--------------EQI 471

Query: 203 NSYQSLNTETNRR**KTANYEGKAMESLYKQSTK 102
              Q++  E+NR    + +    A E L KQ T+
Sbjct: 472 ERVQNMKEESNREIAASMHRFQSAEEDLRKQLTE 505


>tr|Q5E4Q6|Q5E4Q6_VIBF1 Hypothetical cytosolic protein OS=Vibrio
           fischeri (strain ATCC 700601 / ES114) GN=VF_1495 PE=4
           SV=1
          Length = 560

 Score = 34.3 bits (77), Expect = 4.2
 Identities = 26/94 (27%), Positives = 40/94 (42%)
 Frame = -3

Query: 383 RMDKYDNHIVKFKGKNKSLQQGRLKTIT*ICNVKKKPKAEETQVFTVSKELNFPHPRGRL 204
           R DKY  +IV    K K  Q+  +K +    ++ K PKAE T                ++
Sbjct: 426 RFDKYKENIVALNAKYKEAQENTMKVVRAEMDLAKIPKAERTP--------------EQV 471

Query: 203 NSYQSLNTETNRR**KTANYEGKAMESLYKQSTK 102
              Q++  E+NR    + +    A E L KQ T+
Sbjct: 472 ERVQNMKEESNREIAASMHRFQSAEEELRKQLTE 505


>tr|Q7ZVK6|Q7ZVK6_DANRE Ubiquitin carboxyl-terminal hydrolase
           OS=Danio rerio GN=usp1 PE=2 SV=1
          Length = 772

 Score = 33.9 bits (76), Expect = 5.5
 Identities = 27/104 (25%), Positives = 44/104 (42%)
 Frame = -3

Query: 347 KGKNKSLQQGRLKTIT*ICNVKKKPKAEETQVFTVSKELNFPHPRGRLNSYQSLNTETNR 168
           +G + S   G+ K+ T   N KKKPK++     +   E N P  R +  S   ++TE   
Sbjct: 245 EGSSDSQLSGKRKSDTEAGNAKKKPKSQSK---SKKNEENVPMTRSKRKSSSEISTE--- 298

Query: 167 R**KTANYEGKAMESLYKQSTKKKEGGERTDLEENPSLLRRRLG 36
               +A  +    E   K ST ++E  +    +      R +LG
Sbjct: 299 ---NSATEQRNGTEEQEKDSTTEEEKNDSPPKDTGKRTRRGKLG 339


>tr|B8MDP2|B8MDP2_9EURO Putative uncharacterized protein
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_120210 PE=4
           SV=1
          Length = 683

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = -3

Query: 275 PKAEETQVFTVSKELNFPHPRGRLNSYQSLNTETNRR**KTANYEGKAMESLYKQSTKKK 96
           PK+ +T+     K+L  P  RGR    +  NT+T+    K A     A ES +    +  
Sbjct: 156 PKSSDTETIKSDKQLTLPRTRGRKRKLEQANTDTSLTVAKKAKV---AKESAFNGEVQGT 212

Query: 95  EGGERTDLE 69
           +G E    E
Sbjct: 213 QGSESNQNE 221


>tr|B6KCG9|B6KCG9_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_068350 PE=4 SV=1
          Length = 515

 Score = 33.1 bits (74), Expect = 9.5
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +2

Query: 92  LPSSSCSVYISFPWPFPRNWQ-FSISVCLSPCSDSGKNSVFLLDVGS*APLTQ*ILAFLL 268
           LPSSSCS   S PW  P   Q  S+ +   P +D+    VF L V     + + +L    
Sbjct: 216 LPSSSCSPAFSAPWSSPSASQTSSLPLLACPVADAEAIGVFDLRVSQTGAVGKPVLLLRS 275

Query: 269 PSVSSS 286
           P  SSS
Sbjct: 276 PFASSS 281