BP912559
Clone id YMU001_000020_C11
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGAGTATGTATACTATTCCAGAAACCATAAGTGTGTGGATGTGTGCTGAGTTCGACTCCT
GTGTCACCGCAATGGCACCCAAAAGCAGTACAAGACTATGCGGAGTCTTGCCTAATAAAA
TTGAGTTGCCGATGCTCTTGCCTTGGAAGCATTTACATCCTTCTCAAGTTTCACCCAAAA
AGAGAATACATTACCATCATTTAAAAAAGACTGGTCCATGTTCCTTCAAACATAAAGCCC
TTCAAACTTTCTACAATTTATATACCCCTTGTTAAGCAAGGGACCAATTTTTGCACATCC
AGTCCTATCCAATTTTTGTTCATAGCAGCATGTCTAGACCGTCACTGCCACGTTGCTGGA
TTCAGAAGAATATACCCAACCCAGCATTGTGGAATCCTTATTAAAGCAAGTGAAATGTTG
CAGCATTGTCATACAGTAAGAGAATTTATAGAATACA
■■Homology search results ■■ -
sp_hit_id Q09461
Definition sp|Q09461|YQ51_CAEEL Uncharacterized mitochondrial carrier C16C10.1 OS=Caenorhabditis elegans
Align length 99
Score (bit) 32.7
E-value 0.76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912559|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C11.
(457 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q09461|YQ51_CAEEL Uncharacterized mitochondrial carrier C16C1... 33 0.76
sp|P77832|XYLA_BACLD Xylose isomerase OS=Bacillus licheniformis ... 30 6.6
sp|Q9C0D5|TANC1_HUMAN Protein TANC1 OS=Homo sapiens GN=TANC1 PE=... 29 8.4
sp|Q9JJ79|DYHC2_RAT Cytoplasmic dynein 2 heavy chain 1 OS=Rattus... 29 8.4
sp|Q757T0|HUL4_ASHGO Probable E3 ubiquitin-protein ligase HUL4 O... 29 8.6

>sp|Q09461|YQ51_CAEEL Uncharacterized mitochondrial carrier C16C10.1
OS=Caenorhabditis elegans GN=C16C10.1 PE=2 SV=2
Length = 360

Score = 32.7 bits (73), Expect = 0.76
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Frame = +3

Query: 9 YTIPETISVWMCAEFDSCVTAMAPK-------SSTRLCGVLPNKIELPMLLPWKHLHPSQ 167
+T + +SVW+ + C A +P+ S+ + G++ I + ++ P + +
Sbjct: 144 FTTYDNLSVWLKKKM-CCRRAFSPEKWTPPDWSAAAVAGIVARTIAVTVVSPIEMIRTKM 202

Query: 168 VSPKKRIHYHHLKKTGPCSFKHKALQTFYNLYTPC*ARD 284
S KR+ YH + S K + +FY +TP RD
Sbjct: 203 QS--KRLTYHEIGHLVRSSMATKGISSFYLGWTPTMLRD 239


>sp|P77832|XYLA_BACLD Xylose isomerase OS=Bacillus licheniformis
(strain DSM 13 / ATCC 14580) GN=xylA PE=3 SV=1
Length = 448

Score = 29.6 bits (65), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2

Query: 198 DGNVFSFWVKLEKDVNASKARASATQFY*ARLRIVLYCF 82
DG +F W +L ++ +KARA A + +L + +CF
Sbjct: 60 DGTMFRAWNRLTHPLDKAKARAEAAFEFFEKLGVPYFCF 98


>sp|Q9C0D5|TANC1_HUMAN Protein TANC1 OS=Homo sapiens GN=TANC1 PE=1
SV=2
Length = 1861

Score = 29.3 bits (64), Expect = 8.4
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +3

Query: 33 VWMCAEFDSCVTAMAPKSSTRLC-GVLPNKIELPMLLPWKHLHPSQVSPKKRIHYHHLKK 209
V + EF +C+ + T LC ++L LL KK + HL K
Sbjct: 951 VTLLLEFGACLDGTSENGMTALCYAAAAGHMKLVCLLT-----------KKGVRVDHLDK 999

Query: 210 TGPCSFKHKALQ 245
G C+ H AL+
Sbjct: 1000 KGQCALVHSALR 1011


>sp|Q9JJ79|DYHC2_RAT Cytoplasmic dynein 2 heavy chain 1 OS=Rattus
norvegicus GN=Dync2h1 PE=1 SV=1
Length = 4306

Score = 29.3 bits (64), Expect = 8.4
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3

Query: 21 ETISVWMCAEFDSCVTAMAPKSSTRLCGVLPNKIELPMLLPWKHLHPSQVSPKKRIHYHH 200
E+ +W+ AE T + +SS ++ P ++ ++ ++ P Q+S K IH H
Sbjct: 3802 ESFRLWLTAEVHPNFTPILLQSSLKITYESPPGLKKNLMRTYESWTPEQISKKDNIHRAH 3861


>sp|Q757T0|HUL4_ASHGO Probable E3 ubiquitin-protein ligase HUL4
OS=Ashbya gossypii GN=HUL4 PE=3 SV=1
Length = 839

Score = 29.3 bits (64), Expect = 8.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1

Query: 169 FHPKREYIT---II*KRLVHVPSNIKPFKLSTIYIPLVKQGTNF 291
F P E++T ++ P NI F+ S Y+ +V QGT F
Sbjct: 27 FEPNNEFVTSSCCCCGTILQHPKNISKFRCSVCYVTVVLQGTAF 70


tr_hit_id Q8NU20
Definition tr|Q8NU20|Q8NU20_CORGL Putative uncharacterized protein Cgl0129 OS=Corynebacterium glutamicum
Align length 42
Score (bit) 37.4
E-value 0.38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912559|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_C11.
(457 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8NU20|Q8NU20_CORGL Putative uncharacterized protein Cgl0129 ... 37 0.38
tr|Q4WPM5|Q4WPM5_ASPFU Putative uncharacterized protein OS=Asper... 36 0.83
tr|B0Y6G7|B0Y6G7_ASPFC Putative uncharacterized protein OS=Asper... 36 0.83
tr|A7S2U2|A7S2U2_NEMVE Predicted protein OS=Nematostella vectens... 35 2.4
tr|B6L0I3|B6L0I3_BRAFL Putative uncharacterized protein (Fragmen... 33 5.4
tr|Q7N4D0|Q7N4D0_PHOLL Similarities with glycosyltransferase OS=... 33 7.1
tr|B6MWG8|B6MWG8_BRAFL Putative uncharacterized protein OS=Branc... 33 7.1

>tr|Q8NU20|Q8NU20_CORGL Putative uncharacterized protein Cgl0129
OS=Corynebacterium glutamicum GN=Cgl0129 PE=4 SV=1
Length = 207

Score = 37.4 bits (85), Expect = 0.38
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3

Query: 78 PKSSTRLCGVLPNKIELPMLLPWKHLHPSQVSPKKRIHYHHL 203
P SS RLCGVLPN LL W +L P+ + P + +H+L
Sbjct: 115 PLSSHRLCGVLPNH----YLLTWIYLRPAALFPHRPAAHHYL 152


>tr|Q4WPM5|Q4WPM5_ASPFU Putative uncharacterized protein
OS=Aspergillus fumigatus GN=AFUA_4G09790 PE=4 SV=2
Length = 637

Score = 36.2 bits (82), Expect = 0.83
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1

Query: 334 LDRHCHVAGFRRIYPTQHCGILIKASEMLQHCHTVREFI 450
++RH + GFR ++ +HCG+L +A E Q H+ E +
Sbjct: 123 IERHLNGQGFRGLWLVEHCGLLAQALERCQRHHSAAEIL 161


>tr|B0Y6G7|B0Y6G7_ASPFC Putative uncharacterized protein
OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=AFUB_066900 PE=4 SV=1
Length = 637

Score = 36.2 bits (82), Expect = 0.83
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1

Query: 334 LDRHCHVAGFRRIYPTQHCGILIKASEMLQHCHTVREFI 450
++RH + GFR ++ +HCG+L +A E Q H+ E +
Sbjct: 123 IERHLNGQGFRGLWLVEHCGLLAQALERCQRHHSAAEIL 161


>tr|A7S2U2|A7S2U2_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g205926 PE=4 SV=1
Length = 171

Score = 34.7 bits (78), Expect = 2.4
Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Frame = +3

Query: 54 DSCVTAMAPKSSTRLCGVLPNKIELPMLLPWKHLH-------PSQVSPKKRIHYHHLKKT 212
DS +T P S +P + + P+ LH P+ P +R+H HH T
Sbjct: 58 DSILTPTTPYSPLHTHDFIPYTYDSILTTPYPRLHTHDSILIPTTPYPHQRLHTHHSIST 117

Query: 213 GPCSFKHKALQTFYNLYTPC*ARDQFLHIQSYPIFVHSSMSRPSLP 350
P + ++ L+ L P+ +H S+S P+ P
Sbjct: 118 TPYTHPQFHKTSYSRLHIHTYDSVSTLTTPYSPLHIHYSISTPTTP 163


>tr|B6L0I3|B6L0I3_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_155938 PE=4 SV=1
Length = 321

Score = 33.5 bits (75), Expect = 5.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1

Query: 31 VCGCVLSSTPVSPQWHPKAVQDYAESCL 114
+C C +SSTPV P W K + +YA CL
Sbjct: 295 ICDCTVSSTPV-PSWAKKYILNYAARCL 321


>tr|Q7N4D0|Q7N4D0_PHOLL Similarities with glycosyltransferase
OS=Photorhabdus luminescens subsp. laumondii GN=plu2411
PE=4 SV=1
Length = 259

Score = 33.1 bits (74), Expect = 7.1
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +1

Query: 169 FHPKREYITII*KRLVHVPSNIKPFKLSTIYIPLVKQGTNFCTSSPIQFLFIAACLDRHC 348
F+PK YI + + +NI P ++ IYI + K +N TSS I C C
Sbjct: 169 FNPKYRYIEDTELVVRLLKNNIHPVPINQIYIEVNKHSSNQLTSSKFNEKRIKECYKLLC 228

Query: 349 HVAGFRRIYPT 381
+ F +PT
Sbjct: 229 EQSDFFDKFPT 239


>tr|B6MWG8|B6MWG8_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_87605 PE=4 SV=1
Length = 468

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +3

Query: 87 STRLCGVLPNKIELPMLLPWKHLHPSQVSPKKRIHYHHLKKTGPCSFKHKALQTFYNLYT 266
S RL GVLP++ + HLH SQ + HL+ + P F H ++ + T
Sbjct: 92 SPRLLGVLPSQCQPA------HLHSSQPTGFSHSSMAHLQSSQPTGFSHSSMHLHSSQPT 145

Query: 267 PC*ARDQFLHIQS 305
+ H+QS
Sbjct: 146 GLSSHSSMAHLQS 158