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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912563
Clone id YMU001_000020_D04
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGATCCTAGCCCAAAGAAGGTCGTCAGGAGAACTTGGAGAACCAAGTTGAGTTGATCTCT
TTTCTTTTTGTTCTCAGAGTCCATCTCTATGGTGGTTTTACTTACTTCAAATGAGCATCG
AGCGTCCTCGCCACGCAGAGATGAAAATATGTTATTTGTAGCGTTCTCTTTGGCAGCTAT
TGGGAGTAATACGGAATGTTCTGTAATGAAACAGCTGGATAACCACCAGGGGGTAACCAG
CATTGAGATCATGCATCTGGTCGTGTCGACCAAGATTGCTCCATCTGAAGGTGGCAAACA
TAAAGTGGGAACAGCTTGTCTGCGTCGTTGCCTTTGGTGGTGGTCACCATGATAGTTGTG
GAGTCCTCTTTCTGGGAGGAGGAACTGTTTCGCAATTTCGTAATTGTTGAGACCCATCTT
TGAATGCCACAGGGTGATTCTGAGCGCAGGAACATTGTCATTAATTTCATTGTTGCATCT
CATGCAAAC
■■Homology search results ■■ -
sp_hit_id Q9WV41
Definition sp|Q9WV41|INSL6_RAT Insulin-like peptide INSL6 OS=Rattus norvegicus
Align length 28
Score (bit) 34.7
E-value 0.24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912563|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_D04.
         (489 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WV41|INSL6_RAT Insulin-like peptide INSL6 OS=Rattus norvegi...    35   0.24 
sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [...    32   1.2  
sp|O43895|XPP2_HUMAN Xaa-Pro aminopeptidase 2 OS=Homo sapiens GN...    30   4.5  
sp|Q759R3|ALG8_ASHGO Dolichyl pyrophosphate Glc1Man9GlcNAc2 alph...    30   4.5  
sp|Q09638|YR13_CAEEL Probable G-protein coupled receptor T27D1.3...    30   5.9  
sp|P40899|ISP3_SCHPO Sexual differentiation process protein isp3...    30   7.6  

>sp|Q9WV41|INSL6_RAT Insulin-like peptide INSL6 OS=Rattus norvegicus
           GN=Insl6 PE=2 SV=1
          Length = 188

 Score = 34.7 bits (78), Expect = 0.24
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -1

Query: 429 WHSKMGLNNYEIAKQFLLPERGLHNYHG 346
           W S+  L NY++ K+ LLP+ G+H+YHG
Sbjct: 101 WESQ-SLPNYQLKKEELLPKTGVHSYHG 127


>sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase
           [acylating], mitochondrial OS=Arabidopsis thaliana
           GN=ALDH6B2 PE=2 SV=2
          Length = 607

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -2

Query: 401 TKLRNSSSSQKEDSTTIMVTTTKGNDADKLFPLYVCHLQMEQSW-STRPDA*SQCWLPP 228
           TKLR+SSS+    +TT M+    GN+   L P +   L +  SW ST P+  +Q  +PP
Sbjct: 59  TKLRSSSSTTT--TTTTMLLRISGNNLRPLRPQF---LALRSSWLSTSPEQSTQPQMPP 112


>sp|O43895|XPP2_HUMAN Xaa-Pro aminopeptidase 2 OS=Homo sapiens
           GN=XPNPEP2 PE=2 SV=3
          Length = 674

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 454 CSCAQNHPVAFKDGSQQLRNCETVPP 377
           C+CA  H      G Q +RNC T PP
Sbjct: 16  CACAWGHTKPVDLGGQDVRNCSTNPP 41


>sp|Q759R3|ALG8_ASHGO Dolichyl pyrophosphate Glc1Man9GlcNAc2
           alpha-1,3-glucosyltransferase OS=Ashbya gossypii GN=ALG8
           PE=3 SV=1
          Length = 572

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 58  SFLFVLRVHL-YGGFTYFK*ASSVLATQR*KYVICSVLF 171
           +FL V  +H  Y GF +    +S++A +  +YV+C  LF
Sbjct: 173 AFLLVDHIHFQYNGFLFAVLVASIVAARERRYVLCGALF 211


>sp|Q09638|YR13_CAEEL Probable G-protein coupled receptor T27D1.3
           OS=Caenorhabditis elegans GN=T27D1.3 PE=2 SV=2
          Length = 356

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = -1

Query: 291 PSDGAILVDTTRCMISMLVTPWWLSSCFITEHSVLLPIAAKENATNNIFSSLRGEDARCS 112
           P     L      +I++LV  W   +CF + ++V   +  K+  TN++   L    A CS
Sbjct: 125 PMQARQLCSRRNVLITVLVD-WIFVACFASPYAVWHSVKTKDRNTNSLRFKLFQLSATCS 183

Query: 111 FEVSKTT 91
             V K+T
Sbjct: 184 NTVGKST 190


>sp|P40899|ISP3_SCHPO Sexual differentiation process protein isp3
           OS=Schizosaccharomyces pombe GN=isp3 PE=2 SV=2
          Length = 182

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 312 QLVCVVAFGGGHHDSCGVLFLGGGTVSQFRNC*DPSLNAT 431
           +L  + +FG G  D C   F   G ++ FR C DP    T
Sbjct: 113 RLAFLGSFGDGDCDGCNEAFTVTGPITYFRTCPDPLTGIT 152
tr_hit_id Q83AU7
Definition tr|Q83AU7|Q83AU7_COXBU Pyruvate kinase OS=Coxiella burnetii
Align length 35
Score (bit) 36.6
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912563|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_D04.
         (489 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q83AU7|Q83AU7_COXBU Pyruvate kinase OS=Coxiella burnetii GN=p...    37   0.65 
tr|B6J982|B6J982_COXB1 Pyruvate kinase OS=Coxiella burnetii (str...    37   0.65 
tr|B6J2X9|B6J2X9_COXB2 Pyruvate kinase OS=Coxiella burnetii (str...    37   0.65 
tr|A9NAE7|A9NAE7_COXBR Pyruvate kinase OS=Coxiella burnetii (str...    37   0.65 
tr|A9KBV6|A9KBV6_COXBN Pyruvate kinase OS=Coxiella burnetii (str...    37   0.65 
tr|A9ZG70|A9ZG70_COXBU Pyruvate kinase OS=Coxiella burnetii RSA ...    37   0.65 
tr|A8VQX6|A8VQX6_9BACI Aldo/keto reductase OS=Bacillus selenitir...    34   4.2  
tr|A8J1L4|A8J1L4_CHLRE Predicted protein (Fragment) OS=Chlamydom...    34   4.2  
tr|A2QIP1|A2QIP1_ASPNC Putative uncharacterized protein OS=Asper...    34   4.2  

>tr|Q83AU7|Q83AU7_COXBU Pyruvate kinase OS=Coxiella burnetii GN=pyk
           PE=3 SV=2
          Length = 484

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 279 LHLKVANIKWEQLVCVVAFGGGHHDSCGVLFLGGG 383
           L LKV N+K EQ++C V  GG   D  G+  LGGG
Sbjct: 138 LTLKVQNVKGEQIICRVVEGGALSDHKGINRLGGG 172


>tr|B6J982|B6J982_COXB1 Pyruvate kinase OS=Coxiella burnetii (strain
           CbuK_Q154) GN=pyk PE=4 SV=1
          Length = 484

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 279 LHLKVANIKWEQLVCVVAFGGGHHDSCGVLFLGGG 383
           L LKV N+K EQ++C V  GG   D  G+  LGGG
Sbjct: 138 LTLKVQNVKGEQIICRVVEGGALSDHKGINRLGGG 172


>tr|B6J2X9|B6J2X9_COXB2 Pyruvate kinase OS=Coxiella burnetii (strain
           CbuG_Q212) GN=pyk PE=4 SV=1
          Length = 484

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 279 LHLKVANIKWEQLVCVVAFGGGHHDSCGVLFLGGG 383
           L LKV N+K EQ++C V  GG   D  G+  LGGG
Sbjct: 138 LTLKVQNVKGEQIICRVVEGGALSDHKGINRLGGG 172


>tr|A9NAE7|A9NAE7_COXBR Pyruvate kinase OS=Coxiella burnetii (strain
           RSA 331 / Henzerling II) GN=pyk PE=3 SV=1
          Length = 484

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 279 LHLKVANIKWEQLVCVVAFGGGHHDSCGVLFLGGG 383
           L LKV N+K EQ++C V  GG   D  G+  LGGG
Sbjct: 138 LTLKVQNVKGEQIICRVVEGGALSDHKGINRLGGG 172


>tr|A9KBV6|A9KBV6_COXBN Pyruvate kinase OS=Coxiella burnetii (strain
           Dugway 5J108-111) GN=pyk PE=3 SV=1
          Length = 484

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 279 LHLKVANIKWEQLVCVVAFGGGHHDSCGVLFLGGG 383
           L LKV N+K EQ++C V  GG   D  G+  LGGG
Sbjct: 138 LTLKVQNVKGEQIICRVVEGGALSDHKGINRLGGG 172


>tr|A9ZG70|A9ZG70_COXBU Pyruvate kinase OS=Coxiella burnetii RSA 334
           GN=pyk PE=3 SV=1
          Length = 484

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 279 LHLKVANIKWEQLVCVVAFGGGHHDSCGVLFLGGG 383
           L LKV N+K EQ++C V  GG   D  G+  LGGG
Sbjct: 138 LTLKVQNVKGEQIICRVVEGGALSDHKGINRLGGG 172


>tr|A8VQX6|A8VQX6_9BACI Aldo/keto reductase OS=Bacillus
           selenitireducens MLS10 GN=BselDRAFT_2394 PE=3 SV=1
          Length = 325

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 19/69 (27%), Positives = 39/69 (56%)
 Frame = -1

Query: 288 SDGAILVDTTRCMISMLVTPWWLSSCFITEHSVLLPIAAKENATNNIFSSLRGEDARCSF 109
           S+ A L D+T  +IS+ +T  W+++ F    S L+ +   +N   +++ S R + A+  +
Sbjct: 177 SNVAWLQDSTMALISVAITTVWMNTGF----SFLIILGGLQNIDQDLYESSRIDGAKYLY 232

Query: 108 EVSKTTIEM 82
           ++ + TI M
Sbjct: 233 QLRRITIPM 241


>tr|A8J1L4|A8J1L4_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_149628 PE=4
           SV=1
          Length = 263

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/52 (26%), Positives = 32/52 (61%)
 Frame = +2

Query: 119 RASSPRRDENMLFVAFSLAAIGSNTECSVMKQLDNHQGVTSIEIMHLVVSTK 274
           +ASSP   ++++  A++L+ + +     V+++LD H  ++   I+HL+ + K
Sbjct: 6   QASSPHAGDDVVLKAYNLSGLSTFLRHQVLRELDIHARLSHTSIVHLIAAFK 57


>tr|A2QIP1|A2QIP1_ASPNC Putative uncharacterized protein
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An04g04200 PE=3 SV=1
          Length = 476

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -2

Query: 239 WLPPGGYPAVSLQNIPYYSQ*LPKRTLQITYFHLCVARTLD 117
           W  P GY AV +Q   YYS  L   T  +T  HLC   T+D
Sbjct: 427 WDCPRGYRAVWIQGPSYYSDGLGPSTTLLTPSHLCFVPTVD 467