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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912566
Clone id YMU001_000020_D07
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATTCGCGGCCGCGAATTCTTCACTTGATGATGCACCCTTCCCGGCAGTCACCGCCCAATA
TTGTTGGAGAATCCTCTGCCTCTGCACCCTTGCCACCCTCGACCCTGCCTGCAGATGAAC
CCTCGCCTATATTCATCGCTACCCCATATCAGCGCAGCCCGTCCCTTTCTCAAGCTGGTG
CACAGTCCTTCGAGCGTGTGCTGAGTGTTCAGAATTTGCCAGCCATTCAAGCCTTCTGAC
AGCGCAAACAACCCCCATGGCGATGCTCAACCCTATGCTCCTACATCTGCCCAGCACCGC
ACCCGCTTAATCCCTGCTTCTTCGCTAGTTTGTTCTCGCCACACTCAACTCCTCCTTCTC
TCGCTGATATGGCAAAACCATTCTCACTCTCCTCGCCATTATCTACCCCTTCTGCACCCA
CGCCCAGCATCAGCATTATCTACCCCTACTGA
■■Homology search results ■■ -
sp_hit_id Q9Z0R0
Definition sp|Q9Z0R0|HASP_MOUSE Serine/threonine-protein kinase haspin OS=Mus musculus
Align length 48
Score (bit) 32.3
E-value 0.84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912566|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_D07.
         (431 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Z0R0|HASP_MOUSE Serine/threonine-protein kinase haspin OS=M...    32   0.84 
sp|Q9N2K0|ENH1_HUMAN HERV-H_2q24.3 provirus ancestral Env polypr...    32   1.1  
sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 ...    30   3.2  
sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protei...    30   4.2  
sp|Q34879|NU5M_LEMCA NADH-ubiquinone oxidoreductase chain 5 OS=L...    30   4.2  
sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1     30   5.5  
sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S13 (Fragmen...    30   5.5  
sp|P30564|MT2_RICCO Metallothionein-like protein type 2 OS=Ricin...    30   5.5  
sp|Q9N2J9|ENH2_HUMAN HERV-H_3q26 provirus ancestral Env polyprot...    29   7.1  
sp|Q2FPJ4|SYI_METHJ Isoleucyl-tRNA synthetase OS=Methanospirillu...    29   9.3  

>sp|Q9Z0R0|HASP_MOUSE Serine/threonine-protein kinase haspin OS=Mus
           musculus GN=Gsg2 PE=1 SV=3
          Length = 754

 Score = 32.3 bits (72), Expect = 0.84
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +3

Query: 183 SVQNLPAIQAF*QRKQPPWRCSTLCSYICPAPHPLNPCFFASLFSPHS 326
           ++ N P +Q    R +PP +CST CS + P P P   C    L S HS
Sbjct: 90  TLTNTPRVQRL--RPRPPQKCSTPCSRLRPPPFP--NCSPGCLGSDHS 133


>sp|Q9N2K0|ENH1_HUMAN HERV-H_2q24.3 provirus ancestral Env
           polyprotein OS=Homo sapiens PE=2 SV=1
          Length = 584

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 228 QPPWRCSTLCSYICPAPHPLNPCFFASLFSP 320
           +PPW  S   S++ P   PL P F   LF P
Sbjct: 511 EPPWALSNWMSWVLPIVSPLIPIFLLLLFGP 541


>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43
           OS=Caenorhabditis elegans GN=bath-43 PE=2 SV=2
          Length = 451

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +1

Query: 214 SDSANNPHGDAQPYAPTSAQHRTRLIPASSLVCSRHTQLLLLSLIW 351
           S S N+ HG +   +P+SA H   L+P +   C    +++  + +W
Sbjct: 55  SGSGNSAHGRSISPSPSSASHGDPLLPVAENWCHTQVKVVKFNYMW 100


>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic OS=Arabidopsis thaliana
           GN=PCMP-H90 PE=2 SV=1
          Length = 752

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 167 LRACAECSEFASHSSLLT 220
           LRAC +C EFA H SL+T
Sbjct: 709 LRACPDCHEFAKHVSLVT 726


>sp|Q34879|NU5M_LEMCA NADH-ubiquinone oxidoreductase chain 5
           OS=Lemur catta GN=MT-ND5 PE=3 SV=2
          Length = 603

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 283 RLIPASSLVCSRHTQLLLLSLIW 351
           RLIP+ +L+ S++T  LLL LIW
Sbjct: 535 RLIPSHNLIMSQNTASLLLDLIW 557


>sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1
          Length = 5147

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
 Frame = +3

Query: 198 PAIQAF*QR-----KQPPWRCSTLCSYICPAPHPLNPC 296
           P + A+ +R       PPWR  TLC  +CP       C
Sbjct: 799 PVLSAYARRCAQEGASPPWRNQTLCPVMCPGGQEYREC 836


>sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S13 (Fragment)
           OS=Brassica oleracea GN=SLSG PE=2 SV=1
          Length = 434

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
 Frame = +1

Query: 97  NPRLYSSLPHISAARPFLKLVHSPSSV------------C*VFRICQPFKPSDSANNPHG 240
           N   YS L  IS+   F +L  +PSSV            C ++R+C P+   D   +P  
Sbjct: 260 NNSFYSRLT-ISSTGYFERLTWAPSSVVWNVFWSSPNHQCDMYRMCGPYSYCDVNTSPVC 318

Query: 241 DA-QPYAPTSAQHRTRLIPASSLVCSRHTQL 330
           +  Q + P + Q     IP S   C R T+L
Sbjct: 319 NCIQGFRPKNRQQWDLRIPTSG--CIRRTRL 347


>sp|P30564|MT2_RICCO Metallothionein-like protein type 2 OS=Ricinus
           communis GN=MTI PE=3 SV=1
          Length = 80

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = -2

Query: 412 LMLGVGAEGVDNGEESENGFAISAREGGVECGEN 311
           L+LGVGAE   + E  E G  + A EGG +CG+N
Sbjct: 40  LVLGVGAEKA-HFEGGEMG-VVGAEEGGCKCGDN 71


>sp|Q9N2J9|ENH2_HUMAN HERV-H_3q26 provirus ancestral Env polyprotein
           OS=Homo sapiens PE=2 SV=1
          Length = 563

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 228 QPPWRCSTLCSYICPAPHPLNPCFFASLFSP 320
           +PPW  S   S++ P   PL P F    F P
Sbjct: 511 EPPWPLSNWMSWVLPILSPLIPIFLLLFFRP 541


>sp|Q2FPJ4|SYI_METHJ Isoleucyl-tRNA synthetase OS=Methanospirillum
           hungatei (strain JF-1 / DSM 864) GN=ileS PE=3 SV=1
          Length = 1062

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -2

Query: 337 EGGVECGEN-KLAKKQGLSGCGAGQM*EHRVEHRHGGCLRCQ 215
           EGG+  G+  + A ++ LS  G+  +   ++ HR+G C RC+
Sbjct: 356 EGGIYAGQFVRDANEKILSDLGSHLLGRQKITHRYGHCWRCK 397
tr_hit_id Q2H987
Definition tr|Q2H987|Q2H987_CHAGB Predicted protein OS=Chaetomium globosum
Align length 80
Score (bit) 39.7
E-value 0.076
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912566|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_D07.
         (431 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2H987|Q2H987_CHAGB Predicted protein OS=Chaetomium globosum ...    40   0.076
tr|A4C5Q4|A4C5Q4_9GAMM Putative orphan protein OS=Pseudoalteromo...    35   1.4  
tr|Q9SXH5|Q9SXH5_BRAOL SRK13 OS=Brassica oleracea GN=SRK13 PE=4 ...    34   4.2  
tr|Q9M062|Q9M062_ARATH Putative uncharacterized protein F1I16_10...    34   4.2  
tr|Q6NKR3|Q6NKR3_ARATH At3g55600 OS=Arabidopsis thaliana GN=At3g...    34   4.2  
tr|Q570T2|Q570T2_ARATH Putative uncharacterized protein At3g5559...    34   4.2  
tr|Q9SXH4|Q9SXH4_BRAOL SRK13-b OS=Brassica oleracea GN=SRK13-b P...    33   5.5  
tr|A8VP90|A8VP90_BRAOE S13-b receptor kinase OS=Brassica olerace...    33   5.5  
tr|B3MNH1|B3MNH1_DROAN GF15648 OS=Drosophila ananassae GN=GF1564...    33   7.1  
tr|A4I729|A4I729_LEIIN Putative uncharacterized protein OS=Leish...    33   7.1  
tr|A1UQ46|A1UQ46_MYCSK ATPase involved in chromosome partitionin...    33   9.3  
tr|B3NE08|B3NE08_DROER GG16069 OS=Drosophila erecta GN=GG16069 P...    33   9.3  

>tr|Q2H987|Q2H987_CHAGB Predicted protein OS=Chaetomium globosum
           GN=CHGG_03217 PE=4 SV=1
          Length = 329

 Score = 39.7 bits (91), Expect = 0.076
 Identities = 25/80 (31%), Positives = 33/80 (41%)
 Frame = +3

Query: 99  PSPIFIATPYQRSPSLSQAGAQSFERVLSVQNLPAIQAF*QRKQPPWRCSTLCSYICPAP 278
           P+P   ATPY  +P   + G                    +  Q  W+ ST  + I PAP
Sbjct: 136 PTPSVSATPYNPAPKARKRGRPP-----------------KSTQSTWQVSTYQN-ITPAP 177

Query: 279 HPLNPCFFASLFSPHSTPPS 338
           HP +P F     SPH  PP+
Sbjct: 178 HPSSPAFAPQPHSPHLPPPA 197


>tr|A4C5Q4|A4C5Q4_9GAMM Putative orphan protein OS=Pseudoalteromonas
           tunicata D2 GN=PTD2_10849 PE=4 SV=1
          Length = 167

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
 Frame = -2

Query: 361 NGFAISAREGGV---ECGENKLAKKQGLSG---CGAGQM*EHRVEHRHGGC 227
           +G+ + A EG     +CGENK A+K+G  G   CG  +  E +  H+ G C
Sbjct: 40  SGYQLDAAEGKCGEGKCGENKKAEKEGKCGEGKCGENKSAEAKKAHKEGKC 90


>tr|Q9SXH5|Q9SXH5_BRAOL SRK13 OS=Brassica oleracea GN=SRK13 PE=4
           SV=1
          Length = 854

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
 Frame = +1

Query: 91  QMNPRLYSSLPHISAARPFLKLVHSPSSV------------C*VFRICQPFKPSDSANNP 234
           QM    + S+  IS+   F +L  +PSSV            C ++RIC P+   D   +P
Sbjct: 258 QMTNNSFYSILTISSTGYFQRLTWAPSSVVWNVFWSSPNHQCDMYRICGPYTYCDVNTSP 317

Query: 235 HGDA-QPYAPTSAQHRTRLIPASSLVCSRHTQL 330
             +  Q + P + Q     IP S   C R T+L
Sbjct: 318 SCNCIQGFNPENVQQWALRIPISG--CKRRTRL 348


>tr|Q9M062|Q9M062_ARATH Putative uncharacterized protein F1I16_10
           OS=Arabidopsis thaliana GN=F1I16_10 PE=4 SV=1
          Length = 474

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 199 QPF-KPSDSANNPHGDAQPYAPTSAQHRTRLIPASS 303
           +PF K S S ++P  + +P +PTS Q R R++PASS
Sbjct: 84  EPFAKDSTSGSSPKIEDEPRSPTSPQLRRRIVPASS 119


>tr|Q6NKR3|Q6NKR3_ARATH At3g55600 OS=Arabidopsis thaliana
           GN=At3g55600 PE=2 SV=1
          Length = 240

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 199 QPF-KPSDSANNPHGDAQPYAPTSAQHRTRLIPASS 303
           +PF K S S ++P  + +P +PTS Q R R++PASS
Sbjct: 84  EPFAKDSTSGSSPKIEDEPRSPTSPQLRRRIVPASS 119


>tr|Q570T2|Q570T2_ARATH Putative uncharacterized protein At3g55595
           OS=Arabidopsis thaliana GN=At3g55595 PE=2 SV=1
          Length = 240

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 199 QPF-KPSDSANNPHGDAQPYAPTSAQHRTRLIPASS 303
           +PF K S S ++P  + +P +PTS Q R R++PASS
Sbjct: 84  EPFAKDSTSGSSPKIEDEPRSPTSPQLRRRIVPASS 119


>tr|Q9SXH4|Q9SXH4_BRAOL SRK13-b OS=Brassica oleracea GN=SRK13-b PE=4
           SV=1
          Length = 856

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
 Frame = +1

Query: 91  QMNPRLYSSLPHISAARPFLKLVHSPSSV------------C*VFRICQPFKPSDSANNP 234
           QM    + S+  IS+   F +L  +PSSV            C ++RIC P+   D   +P
Sbjct: 258 QMTNNSFYSILTISSTGYFERLTWAPSSVVWNVFWSSPNHQCDMYRICGPYTYCDVNTSP 317

Query: 235 HGDA-QPYAPTSAQHRTRLIPASSLVCSRHTQL 330
             +  Q + P + Q     IP S   C R T+L
Sbjct: 318 SCNCIQGFNPENVQQWALRIPISG--CKRRTRL 348


>tr|A8VP90|A8VP90_BRAOE S13-b receptor kinase OS=Brassica oleracea
           var. acephala GN=SRK13-b PE=2 SV=1
          Length = 856

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
 Frame = +1

Query: 91  QMNPRLYSSLPHISAARPFLKLVHSPSSV------------C*VFRICQPFKPSDSANNP 234
           QM    + S+  IS+   F +L  +PSSV            C ++RIC P+   D   +P
Sbjct: 258 QMTNNSFYSILTISSTGYFERLTWAPSSVVWNVFWSSPNHQCDMYRICGPYTYCDVNTSP 317

Query: 235 HGDA-QPYAPTSAQHRTRLIPASSLVCSRHTQL 330
             +  Q + P + Q     IP S   C R T+L
Sbjct: 318 SCNCIQGFNPENVQQWALRIPISG--CKRRTRL 348


>tr|B3MNH1|B3MNH1_DROAN GF15648 OS=Drosophila ananassae GN=GF15648
            PE=4 SV=1
          Length = 2187

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -2

Query: 370  ESENGFAISAREGGVECGENKLAKKQGLSGCGAGQM 263
            +S +G A+++  GG +  +N L KKQ  SGCG GQ+
Sbjct: 1887 QSNDGGAVTSSTGGFD-NQNSLLKKQLESGCGGGQV 1921


>tr|A4I729|A4I729_LEIIN Putative uncharacterized protein OS=Leishmania
            infantum GN=LinJ31.2900 PE=4 SV=1
          Length = 2640

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
 Frame = +1

Query: 112  SSLPHISAARPFLKLVHSPSSVC*VFRICQPFKPSDSANNPHGDAQPYAPTSAQHRTRLI 291
            S++ H  ++ P L+   SPS +     + QP      A  P G A PYA ++  + TR+ 
Sbjct: 2282 STVVHAMSSHPQLQQPQSPSLLFNTGSLLQPLTWYPYAYMP-GTANPYAESADSNSTRIT 2340

Query: 292  PASSLVCSRHT---QLLLLS--LIWQ 354
            PA +   S  T    +L LS  L+W+
Sbjct: 2341 PAKAATASSMTLYVTMLPLSGRLLWR 2366