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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912567
Clone id YMU001_000020_D09
Library
Length 445
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATTCTTCCAGTTTTTTTAAACGGTAACAGCCGCATTGACATATAAACAGAACAGCCGTGG
AAACCTTGATATGGATCCATGCCTATATCAGAATTTTTCGAGGCAATGTGTCCGGTGATC
CATACAAAGCCCTTCAAAATCCAGCACCAGTTATCTTGGGCCCGGCTTCTTTCCTTCTGA
GGAGAAACTAAAATGCTGAACAATAAATATCACACACATAACCACAATGAGGCAACCAAC
AAGCGAGCTGAAAAACAGTGCCCCTGGTTGTTGCACTTGCACAAACCCATACACACCATT
CGATGCAACTACAATAATATCATTCAAGCCATCACCAGAAAAGTCGGCAACGACTAGTTC
ATGTGTAGGTGCAGATGGCAGGAAGAAGCTTCTGAGCTGCCTTCCACTAGATGATAAAAT
TGCTGCTTCACTCTCACCAGCCACG
■■Homology search results ■■ -
sp_hit_id P02840
Definition sp|P02840|SGS3_DROME Salivary glue protein Sgs-3 OS=Drosophila melanogaster
Align length 92
Score (bit) 31.6
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912567|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_D09.
         (445 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P02840|SGS3_DROME Salivary glue protein Sgs-3 OS=Drosophila m...    32   1.6  
sp|Q5TJE2|ZBT22_CANFA Zinc finger and BTB domain-containing prot...    30   4.6  
sp|A7GS60|MTNW_BACCN 2,3-diketo-5-methylthiopentyl-1-phosphate e...    30   4.6  
sp|Q5KSV0|GTAK_DICDI GATA zinc finger domain-containing protein ...    30   4.6  
sp|Q9LP46|SCAR3_ARATH Protein SCAR3 OS=Arabidopsis thaliana GN=S...    30   6.0  
sp|Q03463|POLG_HCVJ1 Genome polyprotein OS=Hepatitis C virus gen...    29   7.8  

>sp|P02840|SGS3_DROME Salivary glue protein Sgs-3 OS=Drosophila
           melanogaster GN=Sgs3 PE=2 SV=1
          Length = 307

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
 Frame = +2

Query: 173 PSEEKLKC*TINITHITTMRQPTSELKNSAPGCCTCTNPYTPFDATT-IISFKPSPEKSA 349
           P   +  C T   T  TT   PT +     P  CT + P TP   TT +    P+  K+ 
Sbjct: 37  PRTTQPPCTTTTTTTTTTCAPPTQQSTTQPP--CTTSKPTTPKQTTTQLPCTTPTTTKAT 94

Query: 350 TTSSCVGADGRKKLLSCLPLDDKIAASLSPAT 445
           TT          K  +  P   K   +  P T
Sbjct: 95  TTKPTTTKATTTKATTTKPTTTKQTTTQLPCT 126


>sp|Q5TJE2|ZBT22_CANFA Zinc finger and BTB domain-containing protein
           22 OS=Canis familiaris GN=ZBTB22 PE=3 SV=1
          Length = 640

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 169 EAGPKITGAGF*RALYGSPDTLPRKILI*AWIHIK 65
           E GP + GAG  R  Y  P  +P+K     W+++K
Sbjct: 272 ERGPVVPGAGLRRPTYAPPSIMPQK----HWVYVK 302


>sp|A7GS60|MTNW_BACCN 2,3-diketo-5-methylthiopentyl-1-phosphate
           enolase OS=Bacillus cereus subsp. cytotoxis (strain NVH
           391-98) GN=mtnW PE=3 SV=1
          Length = 414

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -2

Query: 393 RSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPGALFFSSLV 238
           RSF +PSA  H   V     D  ND+++ A  G++G     Q G   F + +
Sbjct: 330 RSFPVPSAGIHPGFVPFILRDFGNDVVINAGGGIHGHPNGAQGGGKAFRAAI 381


>sp|Q5KSV0|GTAK_DICDI GATA zinc finger domain-containing protein 11
           OS=Dictyostelium discoideum GN=gtaK PE=2 SV=1
          Length = 650

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
 Frame = +1

Query: 55  PWKP*YGSMPISEFFEAMCPVIHTKPFKIQHQ---LSWARLLSF*GETKMLNNKYHTHNH 225
           P  P   S P S F     P+  + PF   HQ   +     LS    +  +NN  H +NH
Sbjct: 177 PTTPLINSYPSSPFLINQQPLSSSTPFPFNHQPYHIHPFTTLSL-NNSNGINNNNHNNNH 235

Query: 226 NEATN 240
           N + N
Sbjct: 236 NNSNN 240


>sp|Q9LP46|SCAR3_ARATH Protein SCAR3 OS=Arabidopsis thaliana
           GN=SCAR3 PE=1 SV=1
          Length = 1020

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
 Frame = +2

Query: 191 KC*TINITHITTMRQPTSELKNSA--PGCCTCTNPYTPF---DATTIISFKPSPEKSATT 355
           +C +   + + T  +P     +S+  PG CT  +  +     DA     F PS  ++A  
Sbjct: 255 ECLSTATSSLKTGERPKGVFVSSSLTPGSCTIASVLSECETEDAHDNFQFSPSQGQAARG 314

Query: 356 SSCVGADGRKKLLSCLPLDDKIAASLSPA 442
           SSCV  D + +++  L L    A+ +  A
Sbjct: 315 SSCVSWDEKAEIVESLGLQTDEASEMVEA 343


>sp|Q03463|POLG_HCVJ1 Genome polyprotein OS=Hepatitis C virus
           genotype 1b (isolate HC-J1) PE=1 SV=1
          Length = 3011

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 319 YYCSCIEWCVWVCASATTRGTVFQLACWLP 230
           YY  CI WC+W      TR    QL  W+P
Sbjct: 834 YYKRCISWCLWWLQYFLTR-VEAQLHVWVP 862
tr_hit_id Q9SD41
Definition tr|Q9SD41|Q9SD41_ARATH Putative uncharacterized protein F24M12.90 OS=Arabidopsis thaliana
Align length 90
Score (bit) 114.0
E-value 2.0e-24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912567|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_D09.
         (445 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SD41|Q9SD41_ARATH Putative uncharacterized protein F24M12.9...   114   2e-24
tr|Q8W0Z8|Q8W0Z8_ARATH AT3g51050/F24M12_90 OS=Arabidopsis thalia...   114   2e-24
tr|A7QE42|A7QE42_VITVI Chromosome chr4 scaffold_83, whole genome...   114   2e-24
tr|A9PIE0|A9PIE0_POPTR Putative uncharacterized protein OS=Popul...   113   5e-24
tr|Q6YU98|Q6YU98_ORYSJ Os02g0100700 protein OS=Oryza sativa subs...   112   1e-23
tr|B8AGU5|B8AGU5_ORYSI Putative uncharacterized protein OS=Oryza...   112   1e-23
tr|A9RII4|A9RII4_PHYPA Predicted protein OS=Physcomitrella paten...    97   3e-19
tr|A9RAT3|A9RAT3_PHYPA Predicted protein (Fragment) OS=Physcomit...    95   2e-18
tr|A9RAX4|A9RAX4_PHYPA Predicted protein OS=Physcomitrella paten...    92   1e-17
tr|A8JCI7|A8JCI7_CHLRE Predicted protein (Fragment) OS=Chlamydom...    81   2e-14
tr|Q4E258|Q4E258_TRYCR Putative uncharacterized protein OS=Trypa...    67   6e-10
tr|Q4DCS8|Q4DCS8_TRYCR Putative uncharacterized protein OS=Trypa...    67   6e-10
tr|A4HKT4|A4HKT4_LEIBR Putative uncharacterized protein OS=Leish...    58   2e-07
tr|Q381H5|Q381H5_9TRYP FG-GAP repeat protein, putative OS=Trypan...    57   5e-07
tr|B5YMV2|B5YMV2_THAPS Predicted protein OS=Thalassiosira pseudo...    55   2e-06
tr|A3A244|A3A244_ORYSJ Putative uncharacterized protein OS=Oryza...    51   2e-05
tr|Q9U1E4|Q9U1E4_LEIMA Putative uncharacterized protein L1648.04...    50   4e-05
tr|A4S9R2|A4S9R2_OSTLU Predicted protein (Fragment) OS=Ostreococ...    49   9e-05
tr|A4I8B3|A4I8B3_LEIIN Putative uncharacterized protein OS=Leish...    49   9e-05
tr|B7FS65|B7FS65_PHATR Predicted protein OS=Phaeodactylum tricor...    49   1e-04
tr|A7SHV6|A7SHV6_NEMVE Predicted protein OS=Nematostella vectens...    37   0.63 
tr|B6DQA7|B6DQA7_WHEAT DEP1 OS=Triticum aestivum GN=DEP1 PE=2 SV=1     36   1.1  
tr|B6DQA8|B6DQA8_HORVU DEP1 OS=Hordeum vulgare GN=DEP1 PE=2 SV=1       35   1.4  
tr|B2FIP7|B2FIP7_STRMK Putative glycosyltransferase family prote...    35   2.4  
tr|Q21ML9|Q21ML9_SACD2 Putative uncharacterized protein OS=Sacch...    34   3.1  
tr|Q8D4R5|Q8D4R5_VIBVU Rhs family protein OS=Vibrio vulnificus G...    33   5.3  
tr|B6BVU1|B6BVU1_9PROT Putative uncharacterized protein OS=beta ...    33   5.3  
tr|B8AVD5|B8AVD5_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.3  
tr|Q2GPH7|Q2GPH7_CHAGB Putative uncharacterized protein OS=Chaet...    33   5.3  
tr|A7EAY6|A7EAY6_SCLS1 Putative uncharacterized protein OS=Scler...    33   5.3  

>tr|Q9SD41|Q9SD41_ARATH Putative uncharacterized protein F24M12.90
           OS=Arabidopsis thaliana GN=F24M12.90 PE=4 SV=1
          Length = 680

 Score =  114 bits (285), Expect = 2e-24
 Identities = 57/90 (63%), Positives = 67/90 (74%)
 Frame = -2

Query: 438 GESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPGA 259
           G+  A I+S  G  L S  LPS PTH L+  DFS DGL D+IV+ SNGVYGFVQ +QPGA
Sbjct: 585 GDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIVMTSNGVYGFVQTRQPGA 644

Query: 258 LFFSSLVGCLIVVMCVIFIVQHFSFSSEGK 169
           LFFSSLVGCL+VVM VIF+ QH + S +GK
Sbjct: 645 LFFSSLVGCLLVVMAVIFVTQHLN-SIQGK 673


>tr|Q8W0Z8|Q8W0Z8_ARATH AT3g51050/F24M12_90 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 698

 Score =  114 bits (285), Expect = 2e-24
 Identities = 57/90 (63%), Positives = 67/90 (74%)
 Frame = -2

Query: 438 GESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPGA 259
           G+  A I+S  G  L S  LPS PTH L+  DFS DGL D+IV+ SNGVYGFVQ +QPGA
Sbjct: 603 GDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIVMTSNGVYGFVQTRQPGA 662

Query: 258 LFFSSLVGCLIVVMCVIFIVQHFSFSSEGK 169
           LFFSSLVGCL+VVM VIF+ QH + S +GK
Sbjct: 663 LFFSSLVGCLLVVMAVIFVTQHLN-SIQGK 691


>tr|A7QE42|A7QE42_VITVI Chromosome chr4 scaffold_83, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036853001
           PE=4 SV=1
          Length = 688

 Score =  114 bits (285), Expect = 2e-24
 Identities = 60/99 (60%), Positives = 73/99 (73%), Gaps = 3/99 (3%)
 Frame = -2

Query: 441 AGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPG 262
           AG+ EA ++S  G  L S  LP+APTH L+  DFS DGL D+I+V SNGVYGFVQ +QPG
Sbjct: 591 AGDQEAIMMSPGGSLLTSVELPAAPTHALICEDFSNDGLTDLILVTSNGVYGFVQTRQPG 650

Query: 261 ALFFSSLVGCLIVVMCVIFIVQHFSFSSEGK---KPGPR 154
           ALFFS+LVGCLIVVM VIF+ Q+ + S +GK     GPR
Sbjct: 651 ALFFSTLVGCLIVVMGVIFVTQYLN-SMKGKPRASSGPR 688


>tr|A9PIE0|A9PIE0_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 242

 Score =  113 bits (282), Expect = 5e-24
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = -2

Query: 441 AGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPG 262
           AG+ EAA++S  G    SF LP+ PTH L+  DF+ DGL D+IVV SNGVYGFVQ + PG
Sbjct: 145 AGDQEAAVISPGGSVQTSFDLPAPPTHALICEDFTNDGLTDLIVVTSNGVYGFVQTRSPG 204

Query: 261 ALFFSSLVGCLIVVMCVIFIVQHFSFSSEGK 169
           ALFFS+LVGCL++VM VIF+ QH + S +GK
Sbjct: 205 ALFFSTLVGCLLIVMGVIFVTQHIN-SIKGK 234


>tr|Q6YU98|Q6YU98_ORYSJ Os02g0100700 protein OS=Oryza sativa subsp.
           japonica GN=B1370C05.8 PE=2 SV=1
          Length = 701

 Score =  112 bits (279), Expect = 1e-23
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = -2

Query: 438 GESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPGA 259
           G+ EA ++S SG  L S  LP+ PTH LV+ DF+GDGL DII+V S GVYGFVQ + PGA
Sbjct: 604 GDLEAVVISPSGGLLASIELPAPPTHALVLEDFNGDGLTDIILVTSGGVYGFVQTRHPGA 663

Query: 258 LFFSSLVGCLIVVMCVIFIVQHFSFSSEGK 169
           LFFS+LVGCLIVV+ VIF+  H + S+ GK
Sbjct: 664 LFFSTLVGCLIVVIGVIFVSLHLNSSNSGK 693


>tr|B8AGU5|B8AGU5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05449 PE=4 SV=1
          Length = 701

 Score =  112 bits (279), Expect = 1e-23
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = -2

Query: 438 GESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPGA 259
           G+ EA ++S SG  L S  LP+ PTH LV+ DF+GDGL DII+V S GVYGFVQ + PGA
Sbjct: 604 GDLEAVVISPSGGLLASIELPAPPTHALVLEDFNGDGLTDIILVTSGGVYGFVQTRHPGA 663

Query: 258 LFFSSLVGCLIVVMCVIFIVQHFSFSSEGK 169
           LFFS+LVGCLIVV+ VIF+  H + S+ GK
Sbjct: 664 LFFSTLVGCLIVVIGVIFVSLHLNSSNSGK 693


>tr|A9RII4|A9RII4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_159278 PE=4 SV=1
          Length = 721

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 45/95 (47%), Positives = 64/95 (67%)
 Frame = -2

Query: 438 GESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPGA 259
           GE E  ++S  G  +  F LP++ +  ++ ADFSGDGLND+I+V  +G+YGFVQ ++PGA
Sbjct: 621 GEIEGVVISPKGSPVTEFPLPASASAPIIYADFSGDGLNDLILVTHDGIYGFVQARRPGA 680

Query: 258 LFFSSLVGCLIVVMCVIFIVQHFSFSSEGKKPGPR 154
           + FS+LVG LI+VM VIF+ QH        +P  R
Sbjct: 681 ILFSTLVGVLILVMGVIFVTQHLGTGKGKSRPAER 715


>tr|A9RAT3|A9RAT3_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_110752 PE=4 SV=1
          Length = 549

 Score = 94.7 bits (234), Expect = 2e-18
 Identities = 46/90 (51%), Positives = 65/90 (72%)
 Frame = -2

Query: 438 GESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPGA 259
           GE+EA +LS  G  +   FLP+  +  ++  DFSGD LND+I+V+ +G+YGFVQ +QPGA
Sbjct: 449 GEAEAVVLSPKGSYVTQVFLPTPGSAPMIYDDFSGDKLNDLILVSEDGIYGFVQTRQPGA 508

Query: 258 LFFSSLVGCLIVVMCVIFIVQHFSFSSEGK 169
           + F SLVG LI+VM VIF+ QH+  + +GK
Sbjct: 509 ILFVSLVGVLILVMGVIFVTQHWG-TGKGK 537


>tr|A9RAX4|A9RAX4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110865 PE=4 SV=1
          Length = 706

 Score = 92.0 bits (227), Expect = 1e-17
 Identities = 45/95 (47%), Positives = 61/95 (64%)
 Frame = -2

Query: 438 GESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQPGA 259
           GE EA +LS  G  +    LPSA +  ++  DFSGD LND+I+V  +G++GFVQ +QPGA
Sbjct: 606 GELEAVVLSPKGSHVAQVPLPSAGSAPIIYDDFSGDNLNDLILVTKDGIFGFVQTRQPGA 665

Query: 258 LFFSSLVGCLIVVMCVIFIVQHFSFSSEGKKPGPR 154
           + F +L+G LI+VM VIF+ QH        K G R
Sbjct: 666 ILFLTLMGVLILVMGVIFVTQHLGSGKGKSKAGER 700


>tr|A8JCI7|A8JCI7_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_152723 PE=4
           SV=1
          Length = 786

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = -2

Query: 441 AGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVASNGVYGFVQVQQ-P 265
           AG   A I+S  G  L    LP+APT  LVV+DF+GDGLNDIIVV + G+YG+VQVQ   
Sbjct: 665 AGTDHAVIVSEHGHVLAELELPAAPTQPLVVSDFNGDGLNDIIVVTNKGLYGYVQVQHLA 724

Query: 264 GALFFSSLVGCLIVVMCVIFIVQHF 190
           G +  S+L+  L++ + +++  QH+
Sbjct: 725 GGMSLSALLLTLLIALGLVYFTQHY 749