BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912568|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_D10.
         (381 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDC...    50   3e-06
sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD1...    50   3e-06
sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdc...    50   5e-06
sp|O06000|RS1H_BACC1 30S ribosomal protein S1 homolog OS=Bacillu...    43   4e-04
sp|P14129|RS1_RHIME 30S ribosomal protein S1 OS=Rhizobium melilo...    33   7e-04
sp|Q05022|RRP5_YEAST rRNA biogenesis protein RRP5 OS=Saccharomyc...    41   0.002
sp|O06147|RS1_MYCTU 30S ribosomal protein S1 OS=Mycobacterium tu...    40   0.005
sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium le...    40   0.005
sp|Q5E7L1|PNP_VIBF1 Polyribonucleotide nucleotidyltransferase OS...    40   0.005
sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria mening...    33   0.009
sp|P38494|RS1H_BACSU 30S ribosomal protein S1 homolog OS=Bacillu...    39   0.010
sp|A1ST53|PNP_PSYIN Polyribonucleotide nucleotidyltransferase OS...    38   0.014
sp|Q3IJ73|PNP_PSEHT Polyribonucleotide nucleotidyltransferase OS...    38   0.014
sp|A0KND9|PNP_AERHH Polyribonucleotide nucleotidyltransferase OS...    38   0.014
sp|Q7MYZ0|PNP_PHOLL Polyribonucleotide nucleotidyltransferase OS...    38   0.018
sp|Q6LUI8|PNP_PHOPR Polyribonucleotide nucleotidyltransferase OS...    37   0.023
sp|P37560|YABR_BACSU Uncharacterized protein yabR OS=Bacillus su...    37   0.030
sp|O33698|RS1_SYNE7 30S ribosomal protein S1 OS=Synechococcus el...    37   0.030
sp|Q4L6I1|RS1_STAHJ 30S ribosomal protein S1 OS=Staphylococcus h...    37   0.030
sp|Q3YX77|PNP_SHISS Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|Q83JG0|PNP_SHIFL Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|Q0T0B7|PNP_SHIF8 Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|Q32BG9|PNP_SHIDS Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|Q31W43|PNP_SHIBS Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|Q7VL91|PNP_HAEDU Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|Q2NBZ2|PNP_ERYLH Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|Q6D9A1|PNP_ERWCT Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|Q1R6H4|PNP_ECOUT Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|P05055|PNP_ECOLI Polyribonucleotide nucleotidyltransferase OS...    37   0.030
sp|B1IQV7|PNP_ECOLC Polyribonucleotide nucleotidyltransferase OS...    37   0.030

>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11
            PE=1 SV=3
          Length = 1871

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 34/88 (38%), Positives = 45/88 (51%)
 Frame = +3

Query: 3    DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
            D G F++F  GL+GLA    + D FV S   HF  GQ+V AKV  V+    R  LSL+ S
Sbjct: 741  DYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVTNVDEEKQRMLLSLRLS 800

Query: 183  HCYSTDTTFLKGYFLEEEKIAELQASKS 266
             C   D   +    L  + + ELQ  +S
Sbjct: 801  DCGLGDLA-ITSLLLLNQCLEELQGVRS 827



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
           D GC V+F   + GL    +L   ++  P + F  GQ V+  VL       R  LS K S
Sbjct: 554 DYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCEPSKERMLLSFKLS 613


>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11
            PE=2 SV=1
          Length = 1874

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
 Frame = +3

Query: 3    DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
            D G FV+F  GL+GLA    L D FV S   HF  GQ+V AKV  V+    R  LSL+ S
Sbjct: 739  DYGVFVQFPSGLSGLAPKAILSDKFVTSTSDHFVEGQTVVAKVTNVDEEKQRMLLSLRLS 798

Query: 183  HC----YSTDTTFLKGYFLEEEKIAELQASKSDGAELE 284
             C     +T +  L    LEE +      S  D   ++
Sbjct: 799  DCTLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQ 836



 Score = 30.4 bits (67), Expect = 2.8
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLK 176
           D GC V+F   + GL    +L   +V  P   F  GQ V+  VL       R  LS +
Sbjct: 554 DYGCIVKFYNDVQGLVPRHELSAEYVPDPESVFYTGQVVKVVVLNCEPSKERMLLSFR 611


>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11
           PE=2 SV=2
          Length = 1862

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
 Frame = +3

Query: 9   GCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSHC 188
           G FV+F  GL+GL+    + D FV +P +HF  GQ+V AKV  V+    R  LSL+ S C
Sbjct: 743 GVFVQFPSGLSGLSPKTIMSDKFVTTPSEHFVEGQTVVAKVTNVDESKQRMLLSLRLSDC 802

Query: 189 Y---STDTTFL 212
               S  T+FL
Sbjct: 803 SLGDSASTSFL 813



 Score = 29.3 bits (64), Expect = 6.3
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLK 176
           D GC V+F   + GL    +L    +  P   F  GQ V+  VL       R  LS +
Sbjct: 554 DYGCIVKFYNDVQGLVPKHELSTQHIPDPETVFYTGQVVKVAVLSCEPSKERMLLSFR 611


>sp|O06000|RS1H_BACC1 30S ribosomal protein S1 homolog OS=Bacillus
           cereus (strain ATCC 10987) GN=BCE_1625 PE=3 SV=1
          Length = 382

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +3

Query: 9   GCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
           G FV  L G+ GL    Q+ +  V +P +   +GQ V+ KVLEV++   R  LS+K++
Sbjct: 288 GAFVEILPGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIKEA 345



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 22/58 (37%), Positives = 29/58 (50%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLK 176
           D G FV  +GG+ GL    Q+    V  P +    GQ V+ KVL V+    R  LS+K
Sbjct: 201 DFGAFVN-VGGVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADTQRISLSIK 257


>sp|P14129|RS1_RHIME 30S ribosomal protein S1 OS=Rhizobium meliloti
           GN=rpsA PE=3 SV=2
          Length = 568

 Score = 33.1 bits (74), Expect(2) = 7e-04
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQ 179
           D G FV  LGG+ GL     +    V+ P +   +GQ V+ +++ +N    R  L +KQ
Sbjct: 210 DYGAFVD-LGGIDGLLHVTDMAWRRVNHPSEILNIGQQVKVQIIRINQETHRISLGMKQ 267



 Score = 29.3 bits (64), Expect(2) = 7e-04
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 281 GMGKRYWCGKSIEGEIQDIKEYGVIVNVQ 367
           G+G +Y  GK I G + +I +YG  V ++
Sbjct: 275 GIGAKYPVGKKISGTVTNITDYGAFVELE 303


>sp|Q05022|RRP5_YEAST rRNA biogenesis protein RRP5 OS=Saccharomyces
           cerevisiae GN=RRP5 PE=1 SV=1
          Length = 1729

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = +3

Query: 9   GCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSH 185
           GC + F GGL+G     ++ + FV  P +H  +GQ+V  K+L+V+    R   + K S+
Sbjct: 621 GCIISFFGGLSGFLPNSEISEVFVKRPEEHLRLGQTVIVKLLDVDADRRRIIATCKVSN 679



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLK 176
           D+G FV F G   GL  P   +D       K F + QSV   +L  +    +F LSLK
Sbjct: 806 DKGLFVAFNGKFIGLVLPSYAVDSRDIDISKAFYINQSVTVYLLRTDDKNQKFLLSLK 863


>sp|O06147|RS1_MYCTU 30S ribosomal protein S1 OS=Mycobacterium
           tuberculosis GN=rpsA PE=3 SV=1
          Length = 481

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +3

Query: 9   GCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSH 185
           G FVR   G+ GL    +L +  V  P +  AVG     KV++++L   R  LSLKQ++
Sbjct: 308 GAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQAN 366


>sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium
           leprae GN=rpsA PE=3 SV=2
          Length = 481

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +3

Query: 9   GCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSH 185
           G FVR   G+ GL    +L +  V  P +  AVG     KV++++L   R  LSLKQ++
Sbjct: 308 GAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQAN 366


>sp|Q5E7L1|PNP_VIBF1 Polyribonucleotide nucleotidyltransferase
           OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pnp
           PE=3 SV=1
          Length = 709

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 23/61 (37%), Positives = 33/61 (54%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
           D G FV  LG   GL    Q+ +  +     H  VGQ V+ KVLE++   GR  LS+K++
Sbjct: 635 DFGAFVTVLGPKEGLVHISQIAEERIEKVADHLQVGQEVKTKVLEID-RQGRIRLSIKEA 693

Query: 183 H 185
           +
Sbjct: 694 N 694


>sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria
           meningitidis serogroup B GN=rpsA PE=1 SV=1
          Length = 561

 Score = 33.1 bits (74), Expect(2) = 0.009
 Identities = 24/59 (40%), Positives = 29/59 (49%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQ 179
           D G FV  LGG+ GL     L    V  P +   VGQ V AKVL+ +    R  L +KQ
Sbjct: 205 DYGAFVD-LGGIDGLLHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQ 262



 Score = 25.4 bits (54), Expect(2) = 0.009
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 269 WSGVGMGKRYWCGKSIEGEIQDIKEYGVIVNVQ 367
           WSG  + +RY  G  + G++ ++ +YG  V ++
Sbjct: 268 WSG--LTRRYPQGTRLFGKVSNLTDYGAFVEIE 298

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912568|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_D10.
         (381 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SPX0|A9SPX0_PHYPA Predicted protein OS=Physcomitrella paten...   119   2e-29
tr|A7PW23|A7PW23_VITVI Chromosome chr8 scaffold_34, whole genome...    99   8e-22
tr|A3BHL4|A3BHL4_ORYSJ Putative uncharacterized protein OS=Oryza...    83   8e-18
tr|B8B884|B8B884_ORYSI Putative uncharacterized protein OS=Oryza...    83   8e-18
tr|Q7XB75|Q7XB75_ORYSJ Putative pre-rRNA processing protein RRP5...    83   8e-18
tr|Q9LHM6|Q9LHM6_ARATH Pre-rRNA processing protein RRP5 OS=Arabi...    86   1e-15
tr|Q9C7B6|Q9C7B6_ARATH RRNA biogenesis protein, putative, 3' par...    86   1e-15
tr|Q9SF02|Q9SF02_ARATH Putative pre-rRNA processing protein, 5' ...    64   4e-09
tr|A8IBR0|A8IBR0_CHLRE RNA binding rRNA processing protein OS=Ch...    63   8e-09
tr|Q010S4|Q010S4_OSTTA rRNA processing protein Rrp5 (ISS) OS=Ost...    55   2e-06
tr|A4S384|A4S384_OSTLU Predicted protein OS=Ostreococcus lucimar...    52   1e-05
tr|B4DH82|B4DH82_HUMAN cDNA FLJ54437, highly similar to RRP5 pro...    50   6e-05
tr|B3DLK9|B3DLK9_XENLA Putative uncharacterized protein OS=Xenop...    49   1e-04
tr|A0JMT9|A0JMT9_XENLA LOC779090 protein (Fragment) OS=Xenopus l...    49   1e-04
tr|A7GN35|A7GN35_BACCN RNA binding S1 domain protein OS=Bacillus...    45   0.002
tr|B6PRM3|B6PRM3_BRAFL Putative uncharacterized protein OS=Branc...    45   0.002
tr|A7SBJ3|A7SBJ3_NEMVE Predicted protein OS=Nematostella vectens...    45   0.002
tr|Q8YEG3|Q8YEG3_BRUME SSU ribosomal protein S1P OS=Brucella mel...    34   0.003
tr|Q8G3C2|Q8G3C2_BRUSU Ribosomal protein S1 OS=Brucella suis GN=...    34   0.003
tr|Q57FY6|Q57FY6_BRUAB RpsA, ribosomal protein S1 OS=Brucella ab...    34   0.003
tr|Q2YPN4|Q2YPN4_BRUA2 Ribosomal protein S1:RNA binding S1 OS=Br...    34   0.003
tr|B2S7T2|B2S7T2_BRUA1 Ribosomal protein S1 OS=Brucella abortus ...    34   0.003
tr|B0CI47|B0CI47_BRUSI Ribosomal protein S1 OS=Brucella suis (st...    34   0.003
tr|A9M6N2|A9M6N2_BRUC2 Ribosomal protein S1 OS=Brucella canis (s...    34   0.003
tr|A6WUV6|A6WUV6_OCHA4 Ribosomal protein S1 OS=Ochrobactrum anth...    34   0.003
tr|A5VMX6|A5VMX6_BRUO2 Ribosomal protein S1 OS=Brucella ovis (st...    34   0.003
tr|A9CW33|A9CW33_9RHIZ 30S ribosomal protein S1 OS=Hoeflea photo...    34   0.003
tr|B1SEZ9|B1SEZ9_9STRE Putative uncharacterized protein OS=Strep...    44   0.003
tr|Q97RF9|Q97RF9_STRPN Ribosomal protein S1 OS=Streptococcus pne...    44   0.004
tr|Q8CWR9|Q8CWR9_STRR6 30S Ribosomal protein S1 OS=Streptococcus...    44   0.004

>tr|A9SPX0|A9SPX0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_133341 PE=4 SV=1
          Length = 1785

 Score =  119 bits (297), Expect(2) = 2e-29
 Identities = 60/99 (60%), Positives = 73/99 (73%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
           DRGCFVRFLG LTGLAS PQ+ D FV  P  HF+VGQSVRA+VLEV    G+F L LKQS
Sbjct: 652 DRGCFVRFLGRLTGLASVPQVADEFVSDPSNHFSVGQSVRAQVLEVYHDTGKFSLCLKQS 711

Query: 183 HCYSTDTTFLKGYFLEEEKIAELQASKSDGAELEWGKDI 299
            C+STD + ++GYFLEE+KI E     S+ ++LEW K +
Sbjct: 712 VCFSTDVSLIQGYFLEEDKIVE----ASEASDLEWAKTL 746



 Score = 33.1 bits (74), Expect(2) = 2e-29
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 305 GKSIEGEIQDIKEYGVIVNVQNLKD 379
           G    GE+Q+IK+YGVIV + N KD
Sbjct: 749 GACTGGEVQEIKDYGVIVKLPNYKD 773



 Score = 36.6 bits (83), Expect = 0.63
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
 Frame = +3

Query: 60   QLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSHCYSTDTTF--------LK 215
            ++ D +     KH+ VG  VRA+VL+V+    R  L LK+S+  +T+T          +K
Sbjct: 1354 EVADHYFKDIDKHYKVGDRVRARVLKVDNTKQRISLGLKESYFSNTETHVQPVTEEDDMK 1413

Query: 216  GYFLEEEKIAELQASKSDGAELE 284
                E+E + + + S+ D  + E
Sbjct: 1414 VTNEEDELVDDCEESEEDDVDEE 1436


>tr|A7PW23|A7PW23_VITVI Chromosome chr8 scaffold_34, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00025446001
           PE=4 SV=1
          Length = 1799

 Score = 98.6 bits (244), Expect(2) = 8e-22
 Identities = 50/97 (51%), Positives = 68/97 (70%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
           + GCFVRFLG LTG +   +++D     P + F +GQSVR+ +L+VN   GR  LSLKQS
Sbjct: 672 ETGCFVRFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQS 731

Query: 183 HCYSTDTTFLKGYFLEEEKIAELQASKSDGAELEWGK 293
            C STD +F++ YFL EEKIA+LQ S S+ +EL+W +
Sbjct: 732 CCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAE 768



 Score = 28.1 bits (61), Expect(2) = 8e-22
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 305 GKSIEGEIQDIKEYGVIVNVQNLKD 379
           G  IEG+I D K++GV+++ +   D
Sbjct: 773 GTVIEGKIHDAKDFGVVISFEKYND 797



 Score = 39.3 bits (90), Expect = 0.097
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +3

Query: 6    RGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSH 185
            +GCF+     L        L DG+V  P + F +G+ V  +VL V  L+ R +++LK S 
Sbjct: 1267 KGCFILLSRKLDARILLANLSDGYVEKPEREFPIGKLVSGRVLSVEPLSRRVEVTLKTSS 1326

Query: 186  CYS 194
              S
Sbjct: 1327 ATS 1329


>tr|A3BHL4|A3BHL4_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_022536 PE=4 SV=1
          Length = 1912

 Score = 82.8 bits (203), Expect(2) = 8e-18
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +3

Query: 3    DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
            + GCFVRFLG LTG +   + +D  V      F VGQSVR+ +L VN  + R  LSL+QS
Sbjct: 760  EAGCFVRFLGHLTGFSPKDKAVDRSVEKLSNAFYVGQSVRSHILNVNAESARVKLSLQQS 819

Query: 183  HCYSTDTTFLKGYFLEEEKIAELQASKSDGAELEW 287
             C S D +F++GYFL ++KI EL+ S    +  +W
Sbjct: 820  MCSSADCSFVQGYFLLDQKITELKYSDPSSSFHDW 854



 Score = 30.4 bits (67), Expect(2) = 8e-18
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 305 GKSIEGEIQDIKEYGVIVNVQNLKD 379
           G  +EGE+  I+EYGVI+N Q+  D
Sbjct: 861 GNLVEGEVGAIEEYGVILNFQSHPD 885


>tr|B8B884|B8B884_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_25303 PE=4 SV=1
          Length = 1848

 Score = 82.8 bits (203), Expect(2) = 8e-18
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +3

Query: 3    DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
            + GCFVRFLG LTG +   + +D  V      F VGQSVR+ +L VN  + R  LSL+QS
Sbjct: 754  EAGCFVRFLGHLTGFSPKDKAVDRSVEKLSNAFYVGQSVRSHILNVNAESARVKLSLQQS 813

Query: 183  HCYSTDTTFLKGYFLEEEKIAELQASKSDGAELEW 287
             C S D +F++GYFL ++KI EL+ S    +  +W
Sbjct: 814  MCSSADCSFVQGYFLLDQKITELKYSDPSSSFHDW 848



 Score = 30.4 bits (67), Expect(2) = 8e-18
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 305 GKSIEGEIQDIKEYGVIVNVQNLKD 379
           G  +EGE+  I+EYGVI+N Q+  D
Sbjct: 855 GNLVEGEVGAIEEYGVILNFQSHPD 879


>tr|Q7XB75|Q7XB75_ORYSJ Putative pre-rRNA processing protein RRP5
           OS=Oryza sativa subsp. japonica GN=P0431A02.12 PE=4 SV=1
          Length = 1668

 Score = 82.8 bits (203), Expect(2) = 8e-18
 Identities = 43/95 (45%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
           + GCFVRFLG LTG +   + +D  V      F VGQSVR+ +L VN  + R  LSL+QS
Sbjct: 539 EAGCFVRFLGHLTGFSPKDKAVDRSVEKLSNAFYVGQSVRSHILNVNAESARVKLSLQQS 598

Query: 183 HCYSTDTTFLKGYFLEEEKIAELQASKSDGAELEW 287
            C S D +F++GYFL ++KI EL+ S    +  +W
Sbjct: 599 MCSSADCSFVQGYFLLDQKITELKYSDPSSSFHDW 633



 Score = 30.4 bits (67), Expect(2) = 8e-18
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 305 GKSIEGEIQDIKEYGVIVNVQNLKD 379
           G  +EGE+  I+EYGVI+N Q+  D
Sbjct: 640 GNLVEGEVGAIEEYGVILNFQSHPD 664


>tr|Q9LHM6|Q9LHM6_ARATH Pre-rRNA processing protein RRP5
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 1765

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = +3

Query: 3   DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
           + GCFVRFLG LTG A   + +D       + F VGQSVRA +++VN    R  LSLKQS
Sbjct: 635 ENGCFVRFLGRLTGFAPRSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQS 694

Query: 183 HCYSTDTTFLKGYFLEEEKIAELQASKSDGAELEW 287
            C S D +F++ YFL +EKI++LQ+S    ++  W
Sbjct: 695 SCASVDASFVQEYFLMDEKISDLQSSDITKSDCSW 729



 Score = 33.9 bits (76), Expect = 4.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 33   GLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSHCYSTD 200
            G+ GL    QL D  + +    +  G+SVRAK+L+++    R  L +K S+  + D
Sbjct: 1327 GMVGLCHISQLSDDRMENVQARYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGD 1382


>tr|Q9C7B6|Q9C7B6_ARATH RRNA biogenesis protein, putative, 3' partial;
            75505-85642 (Fragment) OS=Arabidopsis thaliana
            GN=T21B14.19 PE=4 SV=1
          Length = 1396

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = +3

Query: 3    DRGCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQS 182
            + GCFVRFLG LTG A   + +D       + F VGQSVRA +++VN    R  LSLKQS
Sbjct: 765  ENGCFVRFLGRLTGFAPRSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQS 824

Query: 183  HCYSTDTTFLKGYFLEEEKIAELQASKSDGAELEW 287
             C S D +F++ YFL +EKI++LQ+S    ++  W
Sbjct: 825  SCASVDASFVQEYFLMDEKISDLQSSDITKSDCSW 859


>tr|Q9SF02|Q9SF02_ARATH Putative pre-rRNA processing protein, 5'
           partial (Fragment) OS=Arabidopsis thaliana GN=F26K24.26
           PE=4 SV=1
          Length = 1111

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 31/63 (49%), Positives = 43/63 (68%)
 Frame = +3

Query: 99  FAVGQSVRAKVLEVNLLAGRFDLSLKQSHCYSTDTTFLKGYFLEEEKIAELQASKSDGAE 278
           F VGQSVRA +++VN    R  LSLKQS C S D +F++ YFL +EKI++LQ+S    ++
Sbjct: 13  FFVGQSVRANIVDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSD 72

Query: 279 LEW 287
             W
Sbjct: 73  CSW 75



 Score = 33.9 bits (76), Expect = 4.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 33  GLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSHCYSTD 200
           G+ GL    QL D  + +    +  G+SVRAK+L+++    R  L +K S+  + D
Sbjct: 673 GMVGLCHISQLSDDRMENVQARYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGD 728


>tr|A8IBR0|A8IBR0_CHLRE RNA binding rRNA processing protein
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_165854 PE=4
           SV=1
          Length = 1280

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 39/85 (45%), Positives = 49/85 (57%)
 Frame = +3

Query: 15  FVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFDLSLKQSHCYS 194
           +VRFL GLTG A  PQL D FV +P + FA GQSVR  V  V+    RF + L+ S   S
Sbjct: 387 YVRFLAGLTGRAGLPQLSDVFVSNPRELFAEGQSVRCLVATVDAARQRFTVLLRPSATAS 446

Query: 195 TDTTFLKGYFLEEEKIAELQASKSD 269
           +D  +L  YF E   +A LQ  + D
Sbjct: 447 SDAAYLIDYFRE---MAALQVLRGD 468


>tr|Q010S4|Q010S4_OSTTA rRNA processing protein Rrp5 (ISS)
            OS=Ostreococcus tauri GN=Ot10g00010 PE=4 SV=1
          Length = 1947

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +3

Query: 9    GCFVRFLGGLTGLASPPQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAG--RFDLSLKQS 182
            G FVRFLG LTGLA P QL+DG        F VG++V A VL V+      R  LSLK S
Sbjct: 790  GVFVRFLGKLTGLAPPSQLVDGVSADIHDMFPVGKTVNALVLAVDTSTSPPRLSLSLKLS 849

Query: 183  HCYS--TDTTFLKGYFLEEEKIAELQASKSD 269
               S  +D   ++ +F + E + E  A+  D
Sbjct: 850  ATSSPLSDAPLIRSFFNDIELLDERVANADD 880