BP912572 |
Clone id |
YMU001_000020_E02 |
Library |
YMU01 |
Length |
357 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000020_E02. |
Accession |
BP912572 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1944Contig1 |
Sequence |
CAGCAGAGAAGAGTCTACAAGCAGATGCTGAGAGTAAGGGAATTGCATGTCTAGGTGAGT CATTCTGGGAAGAGCTGGACCTGTCTAAAGGATCCATTTTCACAATTCTGAAGGGTATCC TCGAAGGCGACCCAACCAATCTTGATGCTCTGGCGTGCTTGGGCAAGAATCTGGTTGACA GTGATGATGCACCACATGCATTGACTGTTATTGAGAAGCTTGAGCTGTTGGACCCTGATG AAATGGAGTGGAAGTACCTAAAAGGCTTTACTTATGACATTAATGGTCAATTCCAACAGG CGAAAACGATTTATGAGGGTATTTTAAAACTTGAACCGTTATCCTCCAAAGCAATAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q58208 |
Definition |
sp|Q58208|Y798_METJA TPR repeat-containing protein MJ0798 OS=Methanocaldococcus jannaschii |
Align length |
112 |
Score (bit) |
40.8 |
E-value |
0.002 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SVB1 |
Definition |
tr|Q9SVB1|Q9SVB1_ARATH Putative uncharacterized protein AT4g39470 OS=Arabidopsis thaliana |
Align length |
80 |
Score (bit) |
57.4 |
E-value |
4.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912572|Adiantum capillus-veneris mRNA, clone: YMU001_000020_E02. (357 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SVB1|Q9SVB1_ARATH Putative uncharacterized protein AT4g3947... 57 4e-07 tr|Q94A56|Q94A56_ARATH AT4g39470/F23K16_100 OS=Arabidopsis thali... 57 4e-07 tr|Q9LS48|Q9LS48_ARATH Gb|AAC98059.1 (Putative uncharacterized p... 52 1e-05 tr|B0CC98|B0CC98_ACAM1 Putative uncharacterized protein OS=Acary... 50 6e-05 tr|B2V7Q8|B2V7Q8_SULSY Tetratricopeptide TPR_2 repeat protein OS... 49 1e-04 tr|B0C500|B0C500_ACAM1 TPR domain protein, putative OS=Acaryochl... 49 1e-04 tr|A7PSX2|A7PSX2_VITVI Chromosome chr8 scaffold_29, whole genome... 49 1e-04 tr|Q9LFG3|Q9LFG3_ARATH Putative uncharacterized protein F4P12_26... 49 1e-04 tr|Q8L606|Q8L606_ARATH Putative uncharacterized protein At3g5356... 49 1e-04 tr|A7PKZ7|A7PKZ7_VITVI Chromosome chr7 scaffold_20, whole genome... 49 1e-04 tr|Q9ZUS6|Q9ZUS6_ARATH Chloroplast lumen common protein family (... 48 3e-04 tr|Q8L932|Q8L932_ARATH Putative uncharacterized protein OS=Arabi... 48 3e-04 tr|B8LNA1|B8LNA1_PICSI Putative uncharacterized protein OS=Picea... 48 3e-04 tr|Q9LZ43|Q9LZ43_ARATH Putative uncharacterized protein T22P11_1... 45 0.001 tr|Q8LEV0|Q8LEV0_ARATH Putative uncharacterized protein OS=Arabi... 45 0.001 tr|B8AYY5|B8AYY5_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A3CV42|A3CV42_METMJ Tetratricopeptide TPR_2 repeat protein OS... 44 0.003 tr|B5CYS9|B5CYS9_9BACE Putative uncharacterized protein OS=Bacte... 44 0.004 tr|B2ET59|B2ET59_9BACT Tetratricopeptide TPR_2 repeat protein OS... 44 0.004 tr|B7K6Y1|B7K6Y1_9CHRO TPR repeat-containing protein OS=Cyanothe... 44 0.005 tr|Q5KQJ2|Q5KQJ2_ORYSJ Os05g0182100 protein OS=Oryza sativa subs... 44 0.005 tr|A3B0L7|A3B0L7_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005 tr|Q5K9C7|Q5K9C7_CRYNE General transcriptional repressor, putati... 44 0.005 tr|Q55K74|Q55K74_CRYNE Putative uncharacterized protein OS=Crypt... 44 0.005 tr|Q0ULF1|Q0ULF1_PHANO Putative uncharacterized protein OS=Phaeo... 42 0.016 tr|A7PNJ3|A7PNJ3_VITVI Chromosome chr1 scaffold_22, whole genome... 42 0.020 tr|Q22AX6|Q22AX6_TETTH TPR Domain containing protein OS=Tetrahym... 41 0.027 tr|Q3UXY9|Q3UXY9_MOUSE Putative uncharacterized protein OS=Mus m... 41 0.035 tr|A3HUX0|A3HUX0_9SPHI Putative uncharacterized protein OS=Algor... 41 0.035 tr|A5BYD2|A5BYD2_VITVI Putative uncharacterized protein OS=Vitis... 41 0.035
>tr|Q9SVB1|Q9SVB1_ARATH Putative uncharacterized protein AT4g39470 OS=Arabidopsis thaliana GN=AT4g39470 PE=4 SV=1 Length = 290
Score = 57.4 bits (137), Expect = 4e-07 Identities = 27/80 (33%), Positives = 47/80 (58%) Frame = +3
Query: 117 ILEGDPTNLDALACLGKNLVDSDDAPHALTVIEKLELLDPDEMEWKYLKGFTYDINGQFQ 296 +LE +P N++A+ + + A+ +EKL L+P E+EWK L+ Y+ G+ Sbjct: 125 LLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELS 184
Query: 297 QAKTIYEGILKLEPLSSKAI 356 +AK +Y+ ILK +PL +A+ Sbjct: 185 KAKRLYKDILKEQPLLIRAL 204
>tr|Q94A56|Q94A56_ARATH AT4g39470/F23K16_100 OS=Arabidopsis thaliana GN=At4g39470 PE=2 SV=1 Length = 341
Score = 57.4 bits (137), Expect = 4e-07 Identities = 27/80 (33%), Positives = 47/80 (58%) Frame = +3
Query: 117 ILEGDPTNLDALACLGKNLVDSDDAPHALTVIEKLELLDPDEMEWKYLKGFTYDINGQFQ 296 +LE +P N++A+ + + A+ +EKL L+P E+EWK L+ Y+ G+ Sbjct: 125 LLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELS 184
Query: 297 QAKTIYEGILKLEPLSSKAI 356 +AK +Y+ ILK +PL +A+ Sbjct: 185 KAKRLYKDILKEQPLLIRAL 204
>tr|Q9LS48|Q9LS48_ARATH Gb|AAC98059.1 (Putative uncharacterized protein) (AT3g18420/MYF24_13) OS=Arabidopsis thaliana GN=At3g18420 PE=2 SV=1 Length = 316
Score = 52.4 bits (124), Expect = 1e-05 Identities = 30/100 (30%), Positives = 53/100 (53%) Frame = +3
Query: 57 ESFWEELDLSKGSIFTILKGILEGDPTNLDALACLGKNLVDSDDAPHALTVIEKLELLDP 236 E +EE+ K S T L +L+ P ++ L L + ++ + AL ++E+L P Sbjct: 90 EKTYEEVKEEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQP 149
Query: 237 DEMEWKYLKGFTYDINGQFQQAKTIYEGILKLEPLSSKAI 356 +E EWK+L G+ + A+ ++E IL+ PLS +A+ Sbjct: 150 EETEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFEAL 189
>tr|B0CC98|B0CC98_ACAM1 Putative uncharacterized protein OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_1762 PE=4 SV=1 Length = 455
Score = 50.1 bits (118), Expect = 6e-05 Identities = 25/80 (31%), Positives = 44/80 (55%) Frame = +3
Query: 117 ILEGDPTNLDALACLGKNLVDSDDAPHALTVIEKLELLDPDEMEWKYLKGFTYDINGQFQ 296 +L DP NLD+L + + V+ A+ ++EK+ P ++ K+ Y++ G+ Q Sbjct: 321 VLTRDPNNLDSLISVYDHYVEVGQLAKAVPLLEKIVAQKPTHLDLKFNLADLYELTGEKQ 380
Query: 297 QAKTIYEGILKLEPLSSKAI 356 +A+ Y+GIL +P KAI Sbjct: 381 KAEATYDGILTAQPQDVKAI 400
>tr|B2V7Q8|B2V7Q8_SULSY Tetratricopeptide TPR_2 repeat protein OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=SYO3AOP1_0336 PE=3 SV=1 Length = 557
Score = 49.3 bits (116), Expect = 1e-04 Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 35/152 (23%) Frame = +3
Query: 6 EKSLQADAESKGI-ACLGESFWEELDLSKGSIFTILKGILEGDPTNLDALACLGKNLVDS 182 +KSLQ D + K + LGE + + + K I K IL+ DP NL+AL L + VD Sbjct: 188 KKSLQIDKKYKPVWQLLGEIYRQSGNYDKA--IEIYKNILKDDPNNLEALNRLFQIYVDK 245
Query: 183 DDAPHALTVIEKL-------------------------ELL---------DPDEMEWKYL 260 DD +A I+K+ E+L +PD K++ Sbjct: 246 DDFNNAAETIDKIIRLNPKDNDAILKKFLLYIKYGKSNEILQDLKKSSQENPDNPFLKFM 305
Query: 261 KGFTYDINGQFQQAKTIYEGILKLEPLSSKAI 356 G Y+ +Q AK IYE + K +P + + I Sbjct: 306 LGMAYETLEDYQNAKAIYEELYKQQPDNQELI 337
>tr|B0C500|B0C500_ACAM1 TPR domain protein, putative OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_0023 PE=4 SV=1 Length = 460
Score = 49.3 bits (116), Expect = 1e-04 Identities = 31/106 (29%), Positives = 54/106 (50%) Frame = +3
Query: 39 GIACLGESFWEELDLSKGSIFTILKGILEGDPTNLDALACLGKNLVDSDDAPHALTVIEK 218 G LG S E+ + + + ILE PT+ +AL L + D + AL ++EK Sbjct: 306 GTGLLGNSSTEQANSTPSEKVKQYEEILEKSPTDPEALLQLSRLYSDLTEFDKALPLMEK 365
Query: 219 LELLDPDEMEWKYLKGFTYDINGQFQQAKTIYEGILKLEPLSSKAI 356 L P++ ++ + Y +NG Q+ +T+Y+ IL ++P S A+ Sbjct: 366 LVEQQPEKSDFLFELAGLYALNGNKQKEETVYDKILTIDPQSILAL 411
>tr|A7PSX2|A7PSX2_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023116001 PE=4 SV=1 Length = 320
Score = 49.3 bits (116), Expect = 1e-04 Identities = 26/78 (33%), Positives = 43/78 (55%) Frame = +3
Query: 120 LEGDPTNLDALACLGKNLVDSDDAPHALTVIEKLELLDPDEMEWKYLKGFTYDINGQFQQ 299 +E P +++ L L + + + A+ VIE+L L+PD+ EW LK Y +G+ + Sbjct: 105 VESHPDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKEWPLLKAHLYSYSGESEL 164
Query: 300 AKTIYEGILKLEPLSSKA 353 AK +E IL PL+ +A Sbjct: 165 AKLGFEEILSANPLTVEA 182
>tr|Q9LFG3|Q9LFG3_ARATH Putative uncharacterized protein F4P12_260 OS=Arabidopsis thaliana GN=F4P12_260 PE=4 SV=1 Length = 388
Score = 48.9 bits (115), Expect = 1e-04 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +3
Query: 132 PTNLDALACLGKNLVDSDDAPHALTVIEKLELLDPDEMEWKYLKGFTYDINGQFQQAKTI 311 P+++DAL L + + S A+ VI++L L+P+E EW LK + +G AKT Sbjct: 175 PSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAKTG 234
Query: 312 YEGILKLEPLSSKA 353 +E IL +PL +A Sbjct: 235 FEEILAKDPLRVEA 248
>tr|Q8L606|Q8L606_ARATH Putative uncharacterized protein At3g53560 OS=Arabidopsis thaliana GN=At3g53560 PE=2 SV=1 Length = 340
Score = 48.9 bits (115), Expect = 1e-04 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +3
Query: 132 PTNLDALACLGKNLVDSDDAPHALTVIEKLELLDPDEMEWKYLKGFTYDINGQFQQAKTI 311 P+++DAL L + + S A+ VI++L L+P+E EW LK + +G AKT Sbjct: 127 PSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAKTG 186
Query: 312 YEGILKLEPLSSKA 353 +E IL +PL +A Sbjct: 187 FEEILAKDPLRVEA 200
>tr|A7PKZ7|A7PKZ7_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019375001 PE=4 SV=1 Length = 367
Score = 48.9 bits (115), Expect = 1e-04 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Frame = +3
Query: 117 ILEGDPTNLDALACLGKNLVDSDDAPHALTVIEKLELLDPDEMEWKYLKGFTYDINGQFQ 296 ILE DP N++AL + + A+ +E+L ++PDE+EW+ L+ +Y+I G Sbjct: 147 ILEKDPRNVEALKVVLYGKMRRGKTKEAVEYVERLIDIEPDEVEWRLLQALSYEIMGHLS 206
Query: 297 QAK-TIYEGILKLE 335 +AK +Y IL+ E Sbjct: 207 KAKRLVYSPILQEE 220
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