BP912574 |
Clone id |
YMU001_000020_E04 |
Library |
YMU01 |
Length |
336 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000020_E04. |
Accession |
BP912574 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATCGTGTCGGCCATAATCATCAAGACTAGTTGTTTCATGCCATACGCCTTCAAGCTCATA CAAGCTCCGAGGATGAAAATGGACCTTCGAATAGTCCGTCCAGAACTGCACAGATTCCTC CAAGCTTTTTTGAATATTGTGCTCAGCATGACAAATAGAGTCACTCTTCCCACTTCCAGC CGGAAAATCGGCCTGCTCTTTGCTCTTCTGCTGATGAACCCACTCAACTTGCTCTTGCTC AAGACTTTGAAGGAGCTCGTTTTTCACATGTGGTTCTGTTACATGCTTGGAGACCTGCCC TTTCCAGGAAGTCACAGAAGTGATGTCAACTAAGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1L908 |
Definition |
sp|Q1L908|MSTO1_DANRE Protein misato homolog 1 OS=Danio rerio |
Align length |
115 |
Score (bit) |
45.4 |
E-value |
9.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6SVB4 |
Definition |
tr|B6SVB4|B6SVB4_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
106 |
Score (bit) |
73.6 |
E-value |
5.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912574|Adiantum capillus-veneris mRNA, clone: YMU001_000020_E04. (336 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6SVB4|B6SVB4_MAIZE Putative uncharacterized protein OS=Zea m... 74 5e-12 tr|B4FAM3|B4FAM3_MAIZE Putative uncharacterized protein OS=Zea m... 74 5e-12 tr|Q10PA8|Q10PA8_ORYSJ Os03g0240900 protein OS=Oryza sativa subs... 70 4e-11 tr|Q2QMY0|Q2QMY0_ORYSJ Os12g0586400 protein OS=Oryza sativa subs... 65 2e-09 tr|B8AJZ6|B8AJZ6_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|A2ZM61|A2ZM61_ORYSI Putative uncharacterized protein OS=Oryza... 64 3e-09 tr|Q7EY42|Q7EY42_ORYSJ Tubulin-related protein-like OS=Oryza sat... 62 2e-08 tr|B8ATE9|B8ATE9_ORYSI Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|A3BJE2|A3BJE2_ORYSJ Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|A3AFY3|A3AFY3_ORYSJ Putative uncharacterized protein OS=Oryza... 61 3e-08 tr|Q2V3B4|Q2V3B4_ARATH Uncharacterized protein At4g37190.2 OS=Ar... 59 1e-07 tr|Q0WMY3|Q0WMY3_ARATH Tubulin-like protein OS=Arabidopsis thali... 59 1e-07 tr|O23167|O23167_ARATH Tubulin-like protein (At4g37190) OS=Arabi... 59 1e-07 tr|A9RV51|A9RV51_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-07 tr|B3RSC7|B3RSC7_TRIAD Putative uncharacterized protein OS=Trich... 51 3e-05 tr|Q4SYY1|Q4SYY1_TETNG Chromosome 21 SCAF11909, whole genome sho... 45 0.002 tr|B6GW17|B6GW17_PENCH Pc06g00740 protein OS=Penicillium chrysog... 37 0.38 tr|A6SSZ2|A6SSZ2_BOTFB Putative uncharacterized protein OS=Botry... 36 0.84 tr|B4DF47|B4DF47_HUMAN cDNA FLJ52644, highly similar to Homo sap... 35 1.4 tr|A8K3J5|A8K3J5_HUMAN cDNA FLJ75054, highly similar to Homo sap... 35 1.4 tr|B8M2T5|B8M2T5_9EURO MtDNA inheritance protein Dml1, putative ... 35 1.4 tr|B6QAT3|B6QAT3_PENMA MtDNA inheritance protein Dml1, putative ... 35 1.4 tr|B2WK69|B2WK69_PYRTR MtDNA inheritance protein dml1 OS=Pyrenop... 35 1.4 tr|A7EPV9|A7EPV9_SCLS1 Putative uncharacterized protein OS=Scler... 35 1.4 tr|B8MZG8|B8MZG8_ASPFL MtDNA inheritance protein Dml1, putative ... 34 3.2 tr|Q0CZP4|Q0CZP4_ASPTN Putative uncharacterized protein OS=Asper... 34 4.2 tr|A9UP49|A9UP49_MONBE Predicted protein (Fragment) OS=Monosiga ... 33 5.5 tr|B5YNQ6|B5YNQ6_THAPS Predicted protein OS=Thalassiosira pseudo... 33 7.2 tr|B4DLS9|B4DLS9_HUMAN cDNA FLJ54699, highly similar to Homo sap... 33 7.2 tr|Q4P4Q8|Q4P4Q8_USTMA Putative uncharacterized protein OS=Ustil... 33 7.2
>tr|B6SVB4|B6SVB4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 560
Score = 73.6 bits (179), Expect = 5e-12 Identities = 36/106 (33%), Positives = 57/106 (53%) Frame = -1
Query: 327 DITSVTSWKGQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGSGKSDSICH 148 D ++ +W G+V+K V +PH +N + Q E+ P+ S ++ Sbjct: 93 DEPNIFTWSGKVTKSVAKPHERN-------------LFLQSLSEEEQNPSSSDGQNNASV 139
Query: 147 AEHNIQKSLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 + ++ +LE V+FWTDYSKV +HP+SLYEL G W + D+YG Sbjct: 140 EDKDLVANLENGVKFWTDYSKVQYHPQSLYELYGSWTDFDRFDNYG 185
>tr|B4FAM3|B4FAM3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 567
Score = 73.6 bits (179), Expect = 5e-12 Identities = 36/106 (33%), Positives = 57/106 (53%) Frame = -1
Query: 327 DITSVTSWKGQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGSGKSDSICH 148 D ++ +W G+V+K V +PH +N + Q E+ P+ S ++ Sbjct: 93 DEPNIFTWSGKVTKSVAKPHERN-------------LFLQSLSEEEQNPSSSDGQNNASV 139
Query: 147 AEHNIQKSLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 + ++ +LE V+FWTDYSKV +HP+SLYEL G W + D+YG Sbjct: 140 EDKDLVANLENGVKFWTDYSKVQYHPQSLYELYGSWTDFDRFDNYG 185
>tr|Q10PA8|Q10PA8_ORYSJ Os03g0240900 protein OS=Oryza sativa subsp. japonica GN=Os03g0240900 PE=4 SV=1 Length = 571
Score = 70.5 bits (171), Expect = 4e-11 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 2/108 (1%) Frame = -1
Query: 327 DITSVTSWKGQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGS-GKSDSIC 151 D +V +W G V++ V++PH +N + Q E+ P+ S G S+S Sbjct: 93 DQLNVATWSGSVTRSVSKPHGRN-------------LFLQSLVEEGQNPSTSNGASNSQK 139
Query: 150 HAEH-NIQKSLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 E ++ LE SV FWTDYSKV +HP+SLYEL G W + D+YG Sbjct: 140 SVEDKDLIDCLENSVNFWTDYSKVQYHPQSLYELHGSWTDFDKFDNYG 187
>tr|Q2QMY0|Q2QMY0_ORYSJ Os12g0586400 protein OS=Oryza sativa subsp. japonica GN=Os12g0586400 PE=4 SV=1 Length = 566
Score = 65.1 bits (157), Expect = 2e-09 Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 2/99 (2%) Frame = -1
Query: 300 GQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGS-GKSDSICHAEH-NIQK 127 G V++ V++PH +N + Q E+ P+ S G S+S E+ ++ + Sbjct: 97 GNVTRSVSKPHGRN-------------LFLQSLVEEGQNPSTSNGGSNSQKSVEYKDLIE 143
Query: 126 SLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 LE + FWTDYSKVH+HP+SLYEL G W + D+YG Sbjct: 144 CLENGINFWTDYSKVHYHPQSLYELYGSWTDFDKFDNYG 182
>tr|B8AJZ6|B8AJZ6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10699 PE=4 SV=1 Length = 572
Score = 65.1 bits (157), Expect = 2e-09 Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 3/109 (2%) Frame = -1
Query: 327 DITSVTSWK-GQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGS-GKSDSI 154 D +V +W+ G V++ V++PH +N + Q E+ P+ S G S+S Sbjct: 93 DQLNVATWQSGSVTRSVSKPHGRN-------------LFLQSLVEEGQNPSTSNGASNSQ 139
Query: 153 CHAEH-NIQKSLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 E ++ LE +V FWTDYSKV +HP+SLYEL G W + D+YG Sbjct: 140 KSVEDKDLIDCLENNVNFWTDYSKVQYHPQSLYELHGSWTDFDKFDNYG 188
>tr|A2ZM61|A2ZM61_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38918 PE=4 SV=1 Length = 566
Score = 64.3 bits (155), Expect = 3e-09 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 5/102 (4%) Frame = -1
Query: 300 GQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGSGKSDSICHAEHNIQ--- 130 G V++ V++PH +N + Q E+ P+ S C+++ +++ Sbjct: 97 GNVTRSVSKPHGRN-------------LFLQSLVEEGQNPSTSNGG---CNSQKSVEDKD 140
Query: 129 --KSLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 + LE V FWTDYSKVH+HP+SLYEL G W + D+YG Sbjct: 141 LIECLENGVNFWTDYSKVHYHPQSLYELYGSWTDFDKFDNYG 182
>tr|Q7EY42|Q7EY42_ORYSJ Tubulin-related protein-like OS=Oryza sativa subsp. japonica GN=OSJNBa0075N02.125 PE=4 SV=1 Length = 489
Score = 61.6 bits (148), Expect = 2e-08 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Frame = -1
Query: 300 GQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGS-GKSDSICHAEH-NIQK 127 G V++ V++PH +N + Q E+ P+ S G S+S E ++ Sbjct: 21 GNVTRSVSKPHGRN-------------LFLQSLVEEGQNPSTSNGASNSQKSVEDKDLID 67
Query: 126 SLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 LE V FWTDYSKV +HP+SLYEL G W + D+YG Sbjct: 68 CLENGVNFWTDYSKVQYHPQSLYELHGSWTDFDKFDNYG 106
>tr|B8ATE9|B8ATE9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17172 PE=4 SV=1 Length = 798
Score = 61.6 bits (148), Expect = 2e-08 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Frame = -1
Query: 300 GQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGS-GKSDSICHAEH-NIQK 127 G V++ V++PH +N + Q E+ P+ S G S+S E ++ Sbjct: 362 GNVTRSVSKPHGRN-------------LFLQSLVEEGQNPSTSNGASNSQKSVEDKDLID 408
Query: 126 SLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 LE V FWTDYSKV +HP+SLYEL G W + D+YG Sbjct: 409 CLENGVNFWTDYSKVQYHPQSLYELHGSWTDFDKFDNYG 447
>tr|A3BJE2|A3BJE2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_023164 PE=4 SV=1 Length = 1378
Score = 61.6 bits (148), Expect = 2e-08 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Frame = -1
Query: 300 GQVSKHVTEPHVKNXXXXXXXXXQVEWVHQQKSKEQADFPAGS-GKSDSICHAEH-NIQK 127 G V++ V++PH +N + Q E+ P+ S G S+S E ++ Sbjct: 1074 GNVTRSVSKPHGRN-------------LFLQSLVEEGQNPSTSNGASNSQKSVEDKDLID 1120
Query: 126 SLEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLDDYG 10 LE V FWTDYSKV +HP+SLYEL G W + D+YG Sbjct: 1121 CLENGVNFWTDYSKVQYHPQSLYELHGSWTDFDKFDNYG 1159
>tr|A3AFY3|A3AFY3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009705 PE=4 SV=1 Length = 553
Score = 60.8 bits (146), Expect = 3e-08 Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 9/63 (14%) Frame = -1
Query: 171 GKSDSICHAEHNIQKS---------LEESVQFWTDYSKVHFHPRSLYELEGVWHETTSLD 19 G++ S + N QKS LE SV FWTDYSKV +HP+SLYEL G W + D Sbjct: 107 GQNPSTSNGASNSQKSVEDKDLIDCLENSVNFWTDYSKVQYHPQSLYELHGSWTDFDKFD 166
Query: 18 DYG 10 +YG Sbjct: 167 NYG 169
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