BP912588
Clone id YMU001_000020_F07
Library
Length 463
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_F07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTGATCCAGAAATGCTTAAAATTTCAAAACTTACTTCAAATCATAAC
AAGAAGCAAGATGAAGTTGCCAAAACAATGGTCATTTCATACCAGCTCTGTTGAGACAAA
AAAACATGCAGAGCGGTTCATAGCCAATATGGCATGTCTTTTCAAATACACCCATAAAGG
GTAGTATGTCCTCTTGATCCAAAATTTAACCCTTGATTAAGATCGGAACATGCCTAGACA
TCTGCACCGGAACTCCACTCTCCAAACTTGCTGAGAAAGGGGTCTTCAACAAGCGCAGAT
ACAAAATTCCAGACATCACATTTTGATTTAATGCCACCCCTCAAGAATCTGTCTGCTCTT
CAGACCCTGTTTTGCAAAATTTTCTCGATATTAAGTAAGGACTTTCAAGGAACCGCAATA
AATGAGCCAAGAGATGTACGAGGAACGCTAATAAGCCGATCTA
■■Homology search results ■■ -
sp_hit_id Q54NK3
Definition sp|Q54NK3|Y6386_DICDI Putative leucine-rich repeat-containing protein DDB_G0285185 OS=Dictyostelium discoideum
Align length 43
Score (bit) 30.0
E-value 4.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912588|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_F07.
(448 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54NK3|Y6386_DICDI Putative leucine-rich repeat-containing pr... 30 4.7

>sp|Q54NK3|Y6386_DICDI Putative leucine-rich repeat-containing
protein DDB_G0285185 OS=Dictyostelium discoideum
GN=DDB_G0285185 PE=4 SV=1
Length = 330

Score = 30.0 bits (66), Expect = 4.7
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +1

Query: 316 MPPLKNLSALQTLFCKIFSILSKDFQGTAINEPRDVRGTLISR 444
+PP +NL +L+ L+ + FS+ + T+++ D+ + I++
Sbjct: 61 LPPFENLQSLEELYLRNFSVTPQQINKTSLSTDSDLTKSFITK 103


tr_hit_id Q4N5X7
Definition tr|Q4N5X7|Q4N5X7_THEPA Putative uncharacterized protein OS=Theileria parva
Align length 96
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912588|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_F07.
(448 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4N5X7|Q4N5X7_THEPA Putative uncharacterized protein OS=Theil... 35 1.9
tr|A7STQ3|A7STQ3_NEMVE Predicted protein OS=Nematostella vectens... 33 7.2
tr|A5B8B2|A5B8B2_VITVI Putative uncharacterized protein OS=Vitis... 33 9.1

>tr|Q4N5X7|Q4N5X7_THEPA Putative uncharacterized protein OS=Theileria
parva GN=TP02_0165 PE=4 SV=1
Length = 1726

Score = 35.0 bits (79), Expect = 1.9
Identities = 24/96 (25%), Positives = 44/96 (45%)
Frame = +1

Query: 22 SKLTSNHNKKQDEVAKTMVISYQLC*DKKTCRAVHSQYGMSFQIHP*RVVCPLDPKFNP* 201
S++ + K +++ + SY D K + + S + + I +V+C +P FNP
Sbjct: 884 SRMLTEEEKDRNKFGLARIYSY----DSKVSKHLESPFKIFADIKECKVLC--NPFFNPS 937

Query: 202 LRSEHA*TSAPELHSPNLLRKGSSTSADTKFQTSHF 309
L+S + S P L S L+ S + ++ HF
Sbjct: 938 LKSNPSLKSKPSLKSKPSLKSKPSLKSKPSLKSKHF 973


>tr|A7STQ3|A7STQ3_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g247347 PE=4 SV=1
Length = 800

Score = 33.1 bits (74), Expect = 7.2
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -1

Query: 391 ESPYLISRKFCKTG-SEEQTDS*GVALNQN-VMSGILYLRLLKTPFSASLESGVPVQMSR 218
E P L S+ K G S + T + + LNQN VM+ +YL LK P L S +PV +
Sbjct: 22 EQPRLNSQVHSKDGASSKWTMNSNIDLNQNKVMTSSVYLPSLKVPLVCLLPSDMPVNAQK 81

Query: 217 HVPILIK 197
+ L++
Sbjct: 82 QLCALLR 88


>tr|A5B8B2|A5B8B2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_000641 PE=4 SV=1
Length = 1460

Score = 32.7 bits (73), Expect = 9.1
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = -3

Query: 434 SVPRTSLGSFIAVP*KSLLNIEKILQNRV*RADRFLRGGIKSKCDVWNFVSALVEDPFLS 255
S+P TS+G + + K++Q +D L+GGI S D +N + DPF +
Sbjct: 114 SLPSTSIGENSGSSGRGV----KVVQWXXFNSDSHLQGGIMSYSDFFNELGDRTRDPFDN 169

Query: 254 KFGEWSSGAD 225
+ SSGA+
Sbjct: 170 AVNQESSGAE 179