BP912590
Clone id YMU001_000020_F09
Library
Length 363
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTGTTTTTTTTTTTTTTTACACATAACAATAGTGTTACATCTCAATAACGTACCATAAT
TACAGATGTTTGAAAATACGAGGCATCATTGTCTTTTTCAATGTTCTGCATGTGTTTGTT
TAACTATGCTTCACTCAAAATTCAGCTTTATCAAAGAAAACACTTTTCCCTTCCTTTGGG
GTGCAGAAAATGATTGCAAGGGTAAAACTTCCTTTTGAAAGGTTTCGCCACCAAATTAAA
ATTTTAATAAGCCTCAAACTACAACATAAAGCAGGATTCTGAAAACATAGCGTCAGCCCT
GGTTGCATATACATAGTATCAGACCTGATGCATATTTCAGTGTGTAGCGTACCTTGCACC
CCA
■■Homology search results ■■ -
sp_hit_id Q10936
Definition sp|Q10936|SRA34_CAEEL Serpentine receptor class alpha-34 OS=Caenorhabditis elegans
Align length 27
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912590|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_F09.
(344 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q10936|SRA34_CAEEL Serpentine receptor class alpha-34 OS=Caen... 31 2.2

>sp|Q10936|SRA34_CAEEL Serpentine receptor class alpha-34
OS=Caenorhabditis elegans GN=sra-34 PE=3 SV=3
Length = 355

Score = 30.8 bits (68), Expect = 2.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2

Query: 253 ALCCSLRLIKILIWWRNLSKGSFTLAI 173
A+C SL I I WRNL K F LA+
Sbjct: 201 AICLSLNTIGWFISWRNLKKDKFNLAV 227


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912590|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_F09.
(344 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******