BP912594
Clone id YMU001_000020_G01
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_G01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACGAAAGATAGTTAACACAGTTAAGGAAAAACCAAGAGAAAGTTGTATTACAATAAACA
AGCCCTGGTGTTAAATTACATTGTCACAAAGAGGGGCGGCATAGCTTTCAGTTTCAGAGA
GCCATGAGCCAGCCCTTCTTTTACATTCTCACTTTCTTTTGACAGGATCAAATGTGGAAA
CAGCCGCTACTGCGCCACTGATGGCAACAAGGACAACACCACCAGCCACCACACTCAGAA
GGAGATTCTTGAGTGAAGGAGAGACGCCTGGAACGGCTGCTTCTGCAATATCAGGGATGA
CTGCTGCGGCTAGAAGGGCGAGAGCAGCTGGGCCTGCAAGGTTCATCTCCATCTTTGGGC
CGGAACTCATAGAGAGTCGACTGCCATTGGAGACAAGCTTCAGAGGTGAAGAAGCCTTAG
AGGCGGGTAAGCAGACGAGGCCATGGCGGGCGGGGAGCCGCGACTCGCTGAGACCGCTGC
TAGGGCACGC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912594|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G01.
(490 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B3DYI2
Definition tr|B3DYI2|B3DYI2_METI4 Threonyl-tRNA synthetase OS=Methylacidiphilum infernorum (isolate V4)
Align length 42
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912594|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G01.
(490 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3DYI2|B3DYI2_METI4 Threonyl-tRNA synthetase OS=Methylacidiph... 34 4.2
tr|A9TK82|A9TK82_PHYPA Predicted protein OS=Physcomitrella paten... 33 7.1
tr|A8HPC8|A8HPC8_CHLRE Predicted protein OS=Chlamydomonas reinha... 33 7.2

>tr|B3DYI2|B3DYI2_METI4 Threonyl-tRNA synthetase
OS=Methylacidiphilum infernorum (isolate V4) GN=thrS
PE=4 SV=1
Length = 611

Score = 33.9 bits (76), Expect = 4.2
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -1

Query: 472 LSESRLPARHGLVCLPASKASSPLKLVSNGSRLSMSSGPKME 347
LSE ++P+R+ L L + + P+ L NGS + + +GP +E
Sbjct: 92 LSERKIPSRYKLDILESIPENEPITLYQNGSFIDLCAGPHVE 133


>tr|A9TK82|A9TK82_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170551 PE=4 SV=1
Length = 126

Score = 33.1 bits (74), Expect = 7.1
Identities = 30/105 (28%), Positives = 39/105 (37%)
Frame = -1

Query: 466 ESRLPARHGLVCLPASKASSPLKLVSNGSRLSMSSGPKMEMNXXXXXXXXXXXXXXXXXX 287
E + +R GL AS ++ N SR+ MS+ P+ + N
Sbjct: 23 EGKTLSRQGLSLAAASPLRMAGQVAMNRSRVVMSAAPQ-DKNVAGLTSLALLAAAVVPEI 81

Query: 286 XXXXXPGVSPSLKNXXXXXXXXXXXXXXXXXXXXXXSTFDPVKRK 152
PG+SPSLKN STFDPVKRK
Sbjct: 82 AEAAQPGISPSLKNLLLSVVAGGTVLTVIGVAVAGVSTFDPVKRK 126


>tr|A8HPC8|A8HPC8_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_129201 PE=4 SV=1
Length = 424

Score = 33.1 bits (74), Expect = 7.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3

Query: 342 FISIFGPELIESRLPLETSFRGEEALEAGKQTRPW-RAGSRDSLRPLL 482
F + G E RL L +F+GEE ++AG TR W + +R+ P L
Sbjct: 78 FYQLRGRPAEEMRLKLNVTFQGEEGIDAGGVTREWYQVMAREMFNPNL 125