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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912595
Clone id YMU001_000020_G02
Library
Length 574
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TAACTTCTTGTGCTTCTTTGATTGGCTCTGCCTTTACTAGTTCAGTGTAGGCAACCACTG
ATAGATCCTTTCCTTTCTTAAAATGGTGAATTCGGATGCAACAATTATTCCATAGGTGAC
CGAAGGCCTTGCTGTAGGTACATTGTGGGCATTCCGTGGAAATGTGGTCCTTGGATTTAC
ATCTTGAATACCAAGTCTCCATCTTCCGGACCGGCTGTCTTGTATGGCTAATCTCTGCAA
TCTGCCTAGCCATTTCTTCAATTTTCTTGGTCCATGATCCTTTCTTTGATTTTTCCTTTG
TCCATTCATTGGAGCTGTTCTCGGAGCTGCTGGATGTTGCACTGGAATCAGATGCTTCAG
TAGCCGAACTACTGCTACTGGTCCTTCTCTTCTTGTGGCTCTTTTCTTTCTTAGCCTGCT
GTTCCAGTTCTAATGCTCGCTAGACCAGATCATTGAATTTCTTTGTAGGGGCTGGTACTT
CTTGTTCTCTCAGCTTCTTGCTTCTGAACCCATTCAGAAACCATGTCCTCAATCTCTTCT
CAGACGGTGGTTCTTGCAACTGTCTAGTCAGTTC
■■Homology search results ■■ -
sp_hit_id Q6PRD1
Definition sp|Q6PRD1|GP179_HUMAN Probable G-protein coupled receptor 179 OS=Homo sapiens
Align length 85
Score (bit) 33.9
E-value 0.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912595|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G02.
         (574 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6PRD1|GP179_HUMAN Probable G-protein coupled receptor 179 OS...    34   0.60 
sp|O15072|ATS3_HUMAN A disintegrin and metalloproteinase with th...    33   1.0  
sp|O95450|ATS2_HUMAN A disintegrin and metalloproteinase with th...    30   6.6  
sp|Q00650|OLNB1_BRANA Oleosin-B1 OS=Brassica napus GN=OlnB1 PE=1...    30   8.6  
sp|Q9Y8A5|LNKS_ASPTE Lovastatin nonaketide synthase OS=Aspergill...    30   8.6  
sp|Q21341|LET99_CAEEL Protein let-99 OS=Caenorhabditis elegans G...    30   8.6  

>sp|Q6PRD1|GP179_HUMAN Probable G-protein coupled receptor 179 OS=Homo
            sapiens GN=GPR179 PE=2 SV=2
          Length = 2367

 Score = 33.9 bits (76), Expect = 0.60
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = -2

Query: 363  LLKHLIPVQH---PAAPRTAPMNGQRKNQRKDHGPRKLKKWLGRLQRLAIQDSRSGRWRL 193
            LL ++ P ++   PA     P  G    +R  H P   +  L R   +A++ SR+G   +
Sbjct: 988  LLTYICPWENAELPAKQENVPQEGPSGPERGHHSPAPARARLWRALSVAVEKSRAGENEM 1047

Query: 192  GIQDVNPRTTFPRNAHNVPTARPSV 118
              +D + +    R A++V   RP +
Sbjct: 1048 DAEDAHHQ----REANDVDEDRPKI 1068


>sp|O15072|ATS3_HUMAN A disintegrin and metalloproteinase with
            thrombospondin motifs 3 OS=Homo sapiens GN=ADAMTS3 PE=2
            SV=2
          Length = 1205

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +1

Query: 40   VQCRQPLIDPFLS*NGEFGCNNYSIGDR----RPCCRYIVGIPWKCGPW 174
            V+C QPL+D           + Y +GDR    RPC R      WK GPW
Sbjct: 931  VRCLQPLLDG----TNRSVHSKYCMGDRPESRRPCNRVPCPAQWKTGPW 975


>sp|O95450|ATS2_HUMAN A disintegrin and metalloproteinase with
            thrombospondin motifs 2 OS=Homo sapiens GN=ADAMTS2 PE=2
            SV=2
          Length = 1211

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +1

Query: 40   VQCRQPLIDPFLS*NGEFGCNNYSIGDRRPCCRYIVGIPWKCGPW 174
            V+C QPL D          CN+     RR C R +    W+ GPW
Sbjct: 940  VRCIQPLHDNTTRSVHAKHCNDARPESRRACSRELCPGRWRAGPW 984


>sp|Q00650|OLNB1_BRANA Oleosin-B1 OS=Brassica napus GN=OlnB1 PE=1
           SV=2
          Length = 157

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -2

Query: 405 KRATRREGPVAVVRLLKHLIPVQHPAAPRTAP 310
           KRAT +E P  + ++LK +IP    AAPR AP
Sbjct: 93  KRATGKEPPAVLSKVLKKIIP-GAAAAPRAAP 123


>sp|Q9Y8A5|LNKS_ASPTE Lovastatin nonaketide synthase OS=Aspergillus
            terreus GN=lovB PE=1 SV=1
          Length = 3038

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 216  SRSGRWRLGIQDVNPRTTFPRNAHNVP 136
            S  G+  L I+DVNPRTT   + H++P
Sbjct: 1077 SAKGQLALTIEDVNPRTTSASDQHHLP 1103


>sp|Q21341|LET99_CAEEL Protein let-99 OS=Caenorhabditis elegans
           GN=let-99 PE=1 SV=1
          Length = 698

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 22/143 (15%)
 Frame = -2

Query: 411 RKKRATRREGPVAVVRLLKHLIPVQHPA--APRTAPMNGQRKNQR--------------- 283
           +K +  R      +   +K L  ++HP   + R+A  +G RK+ +               
Sbjct: 89  KKVKQRRPFSESRIYLFMKTLDELKHPKPRSRRSASFSGARKSAKVAQPASPAATMHRPP 148

Query: 282 KDHGPRKLKKWLGRLQRLAIQDSRSGRWRLGIQDVNPRTTFPRNAHNVPTARPSVTYGII 103
           K   PR+L +  G + +  I +S  G    G  D +     P+          S+    I
Sbjct: 149 KARLPRRLSRSNGNIDKAGIDNSSGGVENHGFDD-HKDDEIPKKQRTPKILNRSLES--I 205

Query: 102 VASEFTILR-----KERIYQWLP 49
              E+T  R     KE++Y WLP
Sbjct: 206 CTEEYTEKREVSEMKEKVYDWLP 228
tr_hit_id A9RDC8
Definition tr|A9RDC8|A9RDC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 63
Score (bit) 44.3
E-value 0.005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912595|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G02.
         (574 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RDC8|A9RDC8_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.005
tr|A9STG5|A9STG5_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.16 
tr|A9SXX6|A9SXX6_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.20 
tr|A9SLY4|A9SLY4_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.27 
tr|A9TPH7|A9TPH7_PHYPA Predicted protein OS=Physcomitrella paten...    38   0.35 
tr|A9U0X6|A9U0X6_PHYPA Predicted protein OS=Physcomitrella paten...    38   0.45 
tr|A9TF47|A9TF47_PHYPA Predicted protein OS=Physcomitrella paten...    38   0.45 
tr|A9TRA3|A9TRA3_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.59 
tr|A9RPR2|A9RPR2_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.59 
tr|A9U384|A9U384_PHYPA Predicted protein OS=Physcomitrella paten...    37   1.0  
tr|A9U2P4|A9U2P4_PHYPA Predicted protein OS=Physcomitrella paten...    37   1.0  
tr|A9T7S5|A9T7S5_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.7  
tr|A9SXA1|A9SXA1_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.7  
tr|A9SLP4|A9SLP4_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.7  
tr|A9RDG2|A9RDG2_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.7  
tr|A9TXD0|A9TXD0_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.3  
tr|A9SMT5|A9SMT5_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.3  
tr|A9SIP4|A9SIP4_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.3  
tr|A9RTG6|A9RTG6_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.3  
tr|A9RID1|A9RID1_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.3  
tr|A9SAV0|A9SAV0_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.9  
tr|A9S2D0|A9S2D0_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.9  
tr|A9U6B9|A9U6B9_PHYPA Predicted protein OS=Physcomitrella paten...    35   3.8  
tr|A9U6B8|A9U6B8_PHYPA Predicted protein OS=Physcomitrella paten...    35   3.8  
tr|A9THJ7|A9THJ7_PHYPA Predicted protein OS=Physcomitrella paten...    35   3.8  
tr|A9T2D2|A9T2D2_PHYPA Predicted protein OS=Physcomitrella paten...    35   3.8  
tr|A9U3X0|A9U3X0_PHYPA Predicted protein (Fragment) OS=Physcomit...    34   5.0  
tr|A9U2G0|A9U2G0_PHYPA Predicted protein OS=Physcomitrella paten...    34   5.0  
tr|A9U2C9|A9U2C9_PHYPA Predicted protein OS=Physcomitrella paten...    34   5.0  
tr|A9TUR9|A9TUR9_PHYPA Predicted protein OS=Physcomitrella paten...    34   5.0  

>tr|A9RDC8|A9RDC8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64580 PE=4 SV=1
          Length = 221

 Score = 44.3 bits (103), Expect = 0.005
 Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVRKMET--WYSRCKSKDHISTECP-------QCTYSKAFGHLW 110
           +EEMA  IA+    RQ      T  WYS CK   H+ TECP       QCT+ +   HL 
Sbjct: 75  MEEMAINIAKDKEKRQKPTNTRTNVWYSNCKGHGHLVTECPSSSQMKDQCTFCRG-NHLT 133

Query: 109 NNC 101
            NC
Sbjct: 134 ANC 136


>tr|A9STG5|A9STG5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_83769 PE=4 SV=1
          Length = 215

 Score = 39.3 bits (90), Expect = 0.16
 Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVRKMET--WYSRCKSKDHISTEC-------PQCTYSKAFGHLW 110
           IEEMA  +A+    RQ      T  WYS CK   H+ TEC        QCT+     HL 
Sbjct: 147 IEEMAVNMAKDKEKRQKPTNTRTNIWYSNCKGHGHLVTECSSPSQMMDQCTFYGG-KHLT 205

Query: 109 NNC 101
            NC
Sbjct: 206 TNC 208


>tr|A9SXX6|A9SXX6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_85462 PE=4 SV=1
          Length = 215

 Score = 38.9 bits (89), Expect = 0.20
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVRKMET--WYSRCKSKDHISTECP-------QCTY 134
           +EEMA  +A+    RQ      T  WYS CK   H+ TECP       QCT+
Sbjct: 135 MEEMAVNMAKDKEKRQKPTNTRTNVWYSNCKGHSHLVTECPSSSLMMDQCTF 186


>tr|A9SLY4|A9SLY4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_81181 PE=4 SV=1
          Length = 289

 Score = 38.5 bits (88), Expect = 0.27
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
 Frame = -1

Query: 223 TRQPVR-KMETWYSRCKSKDHISTECP-------QCTYSKAFGHLWNNC 101
           T++P   +   WYS CK  DH+ TECP       QCT+     HL  NC
Sbjct: 12  TQKPTNIRTNVWYSNCKDHDHLVTECPSPSQMMDQCTFCGG-KHLTANC 59


>tr|A9TPH7|A9TPH7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_95434 PE=4 SV=1
          Length = 270

 Score = 38.1 bits (87), Expect = 0.35
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVRKME--TWYSRCKSKDHISTECP-------QCTYSKAFGHLW 110
           +EE+A+ +A+    R     M    WY+ CK + H  TECP       QCT+     H  
Sbjct: 85  MEELAKNLAKDKEKRHKPSNMRPNVWYNNCKGQGHFDTECPSPRQMDVQCTFCGG-KHPT 143

Query: 109 NNC 101
            NC
Sbjct: 144 QNC 146


>tr|A9U0X6|A9U0X6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_100060 PE=4 SV=1
          Length = 212

 Score = 37.7 bits (86), Expect = 0.45
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVRKMET--WYSRCKSKDHISTECP-------QCTYSKAFGHLW 110
           +EEMA  +A+    R+      T  WYS CK   H+ T+CP       QCT+ +   HL 
Sbjct: 126 MEEMAVHMAKDKEKRKKPTNTRTNVWYSNCKGHGHLVTKCPSPSQMIDQCTFYER-KHLI 184

Query: 109 NNC 101
            NC
Sbjct: 185 ANC 187


>tr|A9TF47|A9TF47_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_91945 PE=4 SV=1
          Length = 222

 Score = 37.7 bits (86), Expect = 0.45
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVRKMET--WYSRCKSKDHISTECP-------QCTYSKAFGHLW 110
           ++E+A  +A+    R     M    WYS CK + H+ TECP       QCT+     H+ 
Sbjct: 121 MDELAVNLAKDKEKRHKPTNMRPNIWYSNCKGQGHLVTECPSPSQMIVQCTFCGG-KHIT 179

Query: 109 NNC 101
            NC
Sbjct: 180 TNC 182


>tr|A9TRA3|A9TRA3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_96115 PE=4 SV=1
          Length = 219

 Score = 37.4 bits (85), Expect = 0.59
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVRKMET--WYSRCKSKDHISTECP-------QCTYSKAFGHLW 110
           +EEMA  +A+    RQ      T  W S CK   H  TECP       QCT+ +   HL 
Sbjct: 152 MEEMAVNMAKDKEKRQKPTNTRTNVWCSNCKGHGHSVTECPSPSQIMGQCTFCRG-KHLT 210

Query: 109 NNC 101
            NC
Sbjct: 211 ANC 213


>tr|A9RPR2|A9RPR2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_68907 PE=4 SV=1
          Length = 192

 Score = 37.4 bits (85), Expect = 0.59
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVRKMETWYSRCKSKDHISTECP-------QCTYSKAFGHLWNN 104
           +EEM   +A+    +    K   W S CK   H+ TECP       QCT+     HL  N
Sbjct: 122 MEEMVVNMAKDKRHKPTNTKTNVWCSNCKDHGHLVTECPSPSQMIGQCTFCGG-KHLTTN 180

Query: 103 C 101
           C
Sbjct: 181 C 181


>tr|A9U384|A9U384_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_101207 PE=4 SV=1
          Length = 233

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = -1

Query: 262 IEEMARQIAEISHTRQPVR--KMETWYSRCKSKDHISTECPQCTYSKAFGHLWNNCCIRI 89
           IEE+A  +A++   R      +   WY+ CK + H  T+CP     +  G  +   C   
Sbjct: 86  IEELAMNLAKVKEKRHKPSNTRPNVWYNNCKEQGHFDTKCP---LPRQTGVQYTINCTNY 142

Query: 88  HHFKKGKDLSVVAYTELVKAEPIKEAQE 5
                G   S +   E+V+A   +  Q+
Sbjct: 143 REKNNGTQESPIHRVEVVQAVHTRSQQK 170