BP912602
Clone id YMU001_000020_G09
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAAGTACTCTGTACAACTCTGTGCAAGCCACACTTTCTCTCTATTTCAAAAATGTTTCTA
CTACATCGCTTGGCCCTGAGCAACATTACAAACCAAAAATACTTTGGCTGTAAAAAAAGA
ATCATTTGAAGCAAAATACCAGATGCTTCAAACAACTTGCTTGCATAAGCTGAATGCTTA
AACAAGCACCTCACAAAACTGTCCTACCACTTAAAACCTACAAACCCAACATATAGTATA
TAACTGTACATTGTGCTCAAAGCAGGACCTCTCATTACATCTTTTAGCTGTTTTCCTATA
CAAGAAAGCCATCTACAATACCTGCTTTCAAGCCTTCCATTGTCATACCCAACAGCTCCT
CCCCAGTAAGTCGACGTGACTAGTAGAAGTACAACAAGGCCTCTACAAAAACTCGGTCAA
AACTTGGCTTCGACGAAAAATGCCAATCATAATCCTCCAAGCGTATCCGCCAGTAGCATG
CAAGGTAAATCACAGAGAAATCCTGCGATATAGCATCTTCCGTGGCTGTACACAATGCTC
ACT
■■Homology search results ■■ -
sp_hit_id Q1CU14
Definition sp|Q1CU14|ERA_HELPH GTP-binding protein era homolog OS=Helicobacter pylori (strain HPAG1)
Align length 61
Score (bit) 30.8
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912602|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G09.
(543 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1CU14|ERA_HELPH GTP-binding protein era homolog OS=Helicobac... 31 4.4
sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 OS=Saccharomy... 30 5.8
sp|Q9ZLW0|ERA_HELPJ GTP-binding protein era homolog OS=Helicobac... 30 7.6
sp|Q3BUL4|PAND_XANC5 Aspartate 1-decarboxylase OS=Xanthomonas ca... 30 9.9
sp|Q8PLK9|PAND_XANAC Aspartate 1-decarboxylase OS=Xanthomonas ax... 30 9.9

>sp|Q1CU14|ERA_HELPH GTP-binding protein era homolog OS=Helicobacter
pylori (strain HPAG1) GN=era PE=3 SV=1
Length = 301

Score = 30.8 bits (68), Expect = 4.4
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1

Query: 16 TLC-KPHFLSISKMFLL-HRLALSNITNQKYFGCKKRII*SKIPDASNNLLA*AECLNKH 189
+LC KPH L++SK+ + H+ L + + + + + S NL A EC++KH
Sbjct: 111 SLCQKPHILALSKIDMATHKQVLQKLQEYQQYNSQFLALVPLSAKKSQNLNALLECISKH 170

Query: 190 L 192
L
Sbjct: 171 L 171


>sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 OS=Saccharomyces
cerevisiae GN=SSK2 PE=1 SV=1
Length = 1579

Score = 30.4 bits (67), Expect = 5.8
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = -3

Query: 517 DAISQDFSV-IYLACYWRIRLEDY--DWHFSSK--PSFDRVFVEALLYFY 383
D + DFS I LA + + Y DW F K P FD VE L YF+
Sbjct: 656 DQMMDDFSTYIKLAVQMKFTVASYCNDWFFKVKIDPEFDHTVVEGLEYFF 705


>sp|Q9ZLW0|ERA_HELPJ GTP-binding protein era homolog OS=Helicobacter
pylori J99 GN=era PE=3 SV=1
Length = 301

Score = 30.0 bits (66), Expect = 7.6
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1

Query: 16 TLC-KPHFLSISKM-FLLHRLALSNITNQKYFGCKKRII*SKIPDASNNLLA*AECLNKH 189
+LC KPH L++SK+ H+ L + + + + + S NL A EC++KH
Sbjct: 111 SLCQKPHILALSKIDTATHKQVLQKLQEYQKYSSQFLALVPLSAKKSQNLNALLECISKH 170

Query: 190 LT 195
L+
Sbjct: 171 LS 172


>sp|Q3BUL4|PAND_XANC5 Aspartate 1-decarboxylase OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=panD PE=3
SV=1
Length = 126

Score = 29.6 bits (65), Expect = 9.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3

Query: 213 KTYKPNI*YITVHCAQSRTSHYI 281
KT+KPN+ Y+ H A S T+H I
Sbjct: 99 KTFKPNLVYVNAHNAISHTNHSI 121


>sp|Q8PLK9|PAND_XANAC Aspartate 1-decarboxylase OS=Xanthomonas
axonopodis pv. citri GN=panD PE=3 SV=1
Length = 126

Score = 29.6 bits (65), Expect = 9.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3

Query: 213 KTYKPNI*YITVHCAQSRTSHYI 281
KT+KPN+ Y+ H A S T+H I
Sbjct: 99 KTFKPNLVYVNAHNAISHTNHSI 121


tr_hit_id B0EP08
Definition tr|B0EP08|B0EP08_ENTDI Putative uncharacterized protein OS=Entamoeba dispar SAW760
Align length 40
Score (bit) 33.1
E-value 9.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912602|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G09.
(543 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0EP08|B0EP08_ENTDI Putative uncharacterized protein OS=Entam... 33 9.7

>tr|B0EP08|B0EP08_ENTDI Putative uncharacterized protein
OS=Entamoeba dispar SAW760 GN=EDI_308790 PE=4 SV=1
Length = 308

Score = 33.1 bits (74), Expect = 9.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2

Query: 380 LVEVQQGLYKNSVKTWLRRKMPIIILQAYPPVACKVNHRE 499
+ EVQ L+ N KT+++ K ++++ YP ++ KV +E
Sbjct: 203 IFEVQYDLFVNIFKTFIQNKKEVVLINKYPSISSKVLFQE 242