BP912603
Clone id YMU001_000020_G10
Library
Length 384
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000020_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATTGGAGAGTGTGGTCACCAAAGACTAAGGTTGGAATGTGGTATGGGCCAGCAGCGACCA
AAAAGTTTGGGTCCACCCTTACCCTTGAGCAAGGGCTGCGGGGATCGGGTGAAATTAACC
GTGTGCTGCTTCGGGAAAGCATTGCTGCTACTCTCAATGCTTTCAACAGTCTGCCCTTCT
ACTATAATGCTATTGAGGTGAGCACGGATGTAGTGAAGTAGATGGTATTTAATGGATGCA
GAGTAGAGGGCAAGGAAAATAGCATGAAGTATAGGTTTTATCTAAGGGCAAGAAAGTGTA
TATTTGAATGTGATATGTTGTTCATCATGGCATACTATTAGGGAACATATTTTAATAGTC
AAATTGTGTGTGTGTGTGTACACA
■■Homology search results ■■ -
sp_hit_id Q54SK3
Definition sp|Q54SK3|Y2417_DICDI Probable serine/threonine-protein kinase DDB_G0282417 OS=Dictyostelium discoideum
Align length 48
Score (bit) 33.1
E-value 0.43
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912603|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G10.
(384 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54SK3|Y2417_DICDI Probable serine/threonine-protein kinase D... 33 0.43
sp|Q5UP65|YR598_MIMIV Putative ankyrin repeat protein R598 OS=Ac... 30 3.7
sp|P59151|RR4_WOORA 30S ribosomal protein S4, chloroplastic OS=W... 29 6.3
sp|A6W376|RL18_MARMS 50S ribosomal protein L18 OS=Marinomonas sp... 29 6.3
sp|Q568E2|ZN750_DANRE Protein ZNF750 OS=Danio rerio GN=znf750 PE... 29 8.2
sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chlorop... 29 8.2
sp|P11159|PBAN_HELZE PBAN-type neuropeptides OS=Heliothis zea PE... 29 8.2
sp|O18641|PBAN_HELAU PBAN-type neuropeptides OS=Helicoverpa assu... 29 8.2
sp|Q95267|GCR_TUPGB Glucocorticoid receptor OS=Tupaia glis belan... 29 8.2
sp|Q9YGL3|NR2E1_ORYLA Nuclear receptor subfamily 2 group E membe... 29 8.4
sp|P15801|DPOG_YEAST DNA polymerase gamma OS=Saccharomyces cerev... 29 8.4

>sp|Q54SK3|Y2417_DICDI Probable serine/threonine-protein kinase
DDB_G0282417 OS=Dictyostelium discoideum GN=DDB_G0282417
PE=3 SV=1
Length = 528

Score = 33.1 bits (74), Expect = 0.43
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = -2

Query: 281 IKPILHAIFLALYSASIKYHLLHYIRAHLNSIIVEGQTVESIESSSNA 138
IKPI++A+ +ALYS +I+ + H+ H N I V T+++ +S S +
Sbjct: 242 IKPIINAMVIALYSVNIEKNYTHFDLNHGN-IFVNIHTLDTCQSISGS 288


>sp|Q5UP65|YR598_MIMIV Putative ankyrin repeat protein R598
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R598 PE=4
SV=1
Length = 304

Score = 30.0 bits (66), Expect = 3.7
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3

Query: 54 ATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFYYNAIEVSTDVVK*MVFN 233
+TK GS +++ G ++ + L +NA N LP Y + D VK +V N
Sbjct: 117 STKYLGSNHYIKEN-PGQDTLSLLRLLIEYGVDVNAHNYLPLYSAVSSKNFDKVKLLVEN 175

Query: 234 GCRV----EGKENSMKYR 275
G V G ENS ++
Sbjct: 176 GANVLRVANGNENSFYFK 193


>sp|P59151|RR4_WOORA 30S ribosomal protein S4, chloroplastic
OS=Woodwardia radicans GN=rps4 PE=3 SV=1
Length = 185

Score = 29.3 bits (64), Expect = 6.3
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3

Query: 75 TLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFY 182
T +L +G R +G +NR+ RES++ +N + +Y
Sbjct: 146 TASLSEGSRPTGLVNRIANRESVSLNINELLVVEYY 181


>sp|A6W376|RL18_MARMS 50S ribosomal protein L18 OS=Marinomonas sp.
(strain MWYL1) GN=rplR PE=3 SV=1
Length = 116

Score = 29.3 bits (64), Expect = 6.3
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Frame = +3

Query: 15 SPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRE----------SIAATLNAF 164
+P+ P +K S TLE+ LRGS N+V +E + T AF
Sbjct: 32 TPRHMYAQVISPCGSKVLASASTLEEALRGSATGNKVAAKEVGTLIATRAKAAGVTSVAF 91

Query: 165 NSLPF-YYNAIEVSTDVVK 218
+ F Y+ ++V D +
Sbjct: 92 DRSGFKYHGRVQVLADAAR 110


>sp|Q568E2|ZN750_DANRE Protein ZNF750 OS=Danio rerio GN=znf750 PE=2
SV=1
Length = 607

Score = 28.9 bits (63), Expect = 8.2
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -2

Query: 278 KPILHAIFLALYSASIKYHLLHYIRAHL--NSIIVEGQTVESIESSSNAFPKQHTVNFTR 105
KP + F ++ +IK HL ++++ +L NSI + Q +E +S A QH+ F+
Sbjct: 21 KPFKYQCFQCPFTCNIKSHLFNHMKYNLCKNSISLVSQRMEQTGKASRA--SQHSPAFSH 78

Query: 104 S 102
+
Sbjct: 79 N 79


>sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic,
chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1
Length = 592

Score = 28.9 bits (63), Expect = 8.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3

Query: 142 MLSRSSTRLISPDPRSPCSRVRVDPNFL 59
+LSR T + P P+ P R++V PN L
Sbjct: 40 VLSRDETSMTPPPPKLPLPRLKVSPNSL 67


>sp|P11159|PBAN_HELZE PBAN-type neuropeptides OS=Heliothis zea PE=1
SV=2
Length = 194

Score = 28.9 bits (63), Expect = 8.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3

Query: 27 KVGMWYGPAATKKFGSTLTLEQGLRGSGEINR---VLLRESIAATLNAFNSLPFYYNAIE 197
++G+W+GP K+ LR S E NR L E+ A ++ LP+ A E
Sbjct: 38 RLGLWFGPRLGKR---------SLRISTEDNRQAFFKLLEAADALKYYYDQLPYEMQADE 88

Query: 198 VSTDVVK*MVF 230
T V K ++F
Sbjct: 89 PETRVTKKVIF 99


>sp|O18641|PBAN_HELAU PBAN-type neuropeptides OS=Helicoverpa assulta
GN=PBAN PE=2 SV=1
Length = 194

Score = 28.9 bits (63), Expect = 8.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3

Query: 27 KVGMWYGPAATKKFGSTLTLEQGLRGSGEINR---VLLRESIAATLNAFNSLPFYYNAIE 197
++G+W+GP K+ LR S E NR L E+ A ++ LP+ A E
Sbjct: 38 RLGLWFGPRLGKR---------SLRISTEDNRQAFFKLLEAADALKYYYDQLPYEMQADE 88

Query: 198 VSTDVVK*MVF 230
T V K ++F
Sbjct: 89 PETRVTKKVIF 99


>sp|Q95267|GCR_TUPGB Glucocorticoid receptor OS=Tupaia glis
belangeri GN=NR3C1 PE=2 SV=1
Length = 776

Score = 28.9 bits (63), Expect = 8.2
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3

Query: 30 VGMWYGPAATKKFGSTLTLEQGLR---GSGEINRVLLRESIAATLNAFNSLP 176
+G++ G TK G+ L Q + SGE N LL ESI A LN S+P
Sbjct: 86 MGLYMGETETKVMGNDLGFPQQGQITLSSGETNLQLLEESI-ANLNRSTSVP 136


>sp|Q9YGL3|NR2E1_ORYLA Nuclear receptor subfamily 2 group E member 1
OS=Oryzias latipes GN=nr2e1 PE=2 SV=1
Length = 396

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1

Query: 124 CCFGKALLLLSMLSTVCPSTI 186
C FGK LLLL L +V PSTI
Sbjct: 349 CRFGKLLLLLPALRSVSPSTI 369


tr_hit_id A9PG40
Definition tr|A9PG40|A9PG40_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 68
Score (bit) 66.6
E-value 6.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912603|Adiantum capillus-veneris mRNA, clone:
YMU001_000020_G10.
(384 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9PG40|A9PG40_POPTR Putative uncharacterized protein OS=Popul... 67 6e-10
tr|A7P875|A7P875_VITVI Chromosome chr3 scaffold_8, whole genome ... 62 1e-08
tr|A5BQN4|A5BQN4_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08
tr|Q9SLF4|Q9SLF4_ARATH Putative uncharacterized protein At2g1663... 61 2e-08
tr|Q8RWG5|Q8RWG5_ARATH Putative uncharacterized protein At2g1663... 61 2e-08
tr|B6TRI2|B6TRI2_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08
tr|B4FZU6|B4FZU6_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08
tr|B6TF27|B6TF27_MAIZE Putative uncharacterized protein OS=Zea m... 61 3e-08
tr|Q6YU87|Q6YU87_ORYSJ Os02g0101900 protein OS=Oryza sativa subs... 59 2e-07
tr|A3A255|A3A255_ORYSJ Putative uncharacterized protein OS=Oryza... 59 2e-07
tr|A2WZR9|A2WZR9_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07
tr|A3ATM2|A3ATM2_ORYSJ Putative uncharacterized protein OS=Oryza... 56 1e-06
tr|A2XT62|A2XT62_ORYSI Putative uncharacterized protein OS=Oryza... 54 5e-06
tr|A2Y3G7|A2Y3G7_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.001
tr|A9SHJ0|A9SHJ0_PHYPA Predicted protein OS=Physcomitrella paten... 35 1.4
tr|A7SD61|A7SD61_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 4.2

>tr|A9PG40|A9PG40_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 318

Score = 66.6 bits (161), Expect = 6e-10
Identities = 33/68 (48%), Positives = 45/68 (66%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFY 182
W SP KV + +G A +++G+ +TL QGL+G G+ R LLRE AA LN++NS+ F
Sbjct: 213 WGAVSPDMKVAVVFGLLAARRYGTDMTLWQGLQGRGDPYRTLLREGTAALLNSYNSIEFP 272

Query: 183 YNAIEVST 206
YNAI V T
Sbjct: 273 YNAISVVT 280


>tr|A7P875|A7P875_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036073001
PE=4 SV=1
Length = 313

Score = 62.0 bits (149), Expect = 1e-08
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFY 182
W+V +P KV +G A +K+G+ +TL +GL+G G+ R LLRE+I + LN++NSL F
Sbjct: 208 WKVVNPDMKVASVFGLLAAQKYGTDMTLREGLQGRGDPYRTLLREAITSLLNSYNSLLFP 267

Query: 183 YNAIEV 200
Y+ + V
Sbjct: 268 YHTLGV 273


>tr|A5BQN4|A5BQN4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_029831 PE=4 SV=1
Length = 1434

Score = 62.0 bits (149), Expect = 1e-08
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFY 182
W+V +P KV +G A +K+G+ +TL +GL+G G+ R LLRE+I + LN++NSL F
Sbjct: 573 WKVVNPDMKVASVFGLLAAQKYGTDMTLREGLQGRGDPYRTLLREAITSLLNSYNSLLFP 632

Query: 183 YNAIEV 200
Y+ + V
Sbjct: 633 YHTLGV 638


>tr|Q9SLF4|Q9SLF4_ARATH Putative uncharacterized protein At2g16630
OS=Arabidopsis thaliana GN=At2g16630 PE=4 SV=1
Length = 353

Score = 61.2 bits (147), Expect = 2e-08
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFY 182
WR P TKV + +G A + +G+ +T+ + L G GE + LLRE+ A LN++NSL F
Sbjct: 251 WRAIGPDTKVAVAFGLVAGRIYGTDMTVREALDGRGEAYKTLLREATTALLNSYNSLGFP 310

Query: 183 YNAIEVST 206
YN++ V T
Sbjct: 311 YNSVAVIT 318


>tr|Q8RWG5|Q8RWG5_ARATH Putative uncharacterized protein At2g16630
(At2g16630) OS=Arabidopsis thaliana GN=At2g16630 PE=2
SV=1
Length = 359

Score = 61.2 bits (147), Expect = 2e-08
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFY 182
WR P TKV + +G A + +G+ +T+ + L G GE + LLRE+ A LN++NSL F
Sbjct: 257 WRAIGPDTKVAVAFGLVAGRIYGTDMTVREALDGRGEAYKTLLREATTALLNSYNSLGFP 316

Query: 183 YNAIEVST 206
YN++ V T
Sbjct: 317 YNSVAVIT 324


>tr|B6TRI2|B6TRI2_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 356

Score = 61.2 bits (147), Expect = 2e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLP 176
W+V +P T V M +GP A +++GS LTL + L G G++ R LLRE+ AA LNA+ + P
Sbjct: 244 WKVVTPNTTVAMAFGPLAAQRYGSELTLGEALEGRGDMYRTLLREATAALLNAYYNAP 301


>tr|B4FZU6|B4FZU6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 348

Score = 61.2 bits (147), Expect = 2e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLP 176
W+V +P T V M +GP A +++GS LTL + L G G++ R LLRE+ AA LNA+ + P
Sbjct: 236 WKVVTPNTTVAMAFGPLAAQRYGSELTLGEALEGRGDMYRTLLREATAALLNAYYNAP 293


>tr|B6TF27|B6TF27_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 355

Score = 60.8 bits (146), Expect = 3e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLP 176
W+V +P T V M +GP A +++GS LTL + L G G++ R LLRE+ AA LNA+ + P
Sbjct: 243 WKVVTPNTTVAMAFGPLAAQRYGSELTLGEXLEGRGDMYRTLLREATAALLNAYYNAP 300


>tr|Q6YU87|Q6YU87_ORYSJ Os02g0101900 protein OS=Oryza sativa subsp.
japonica GN=B1370C05.22 PE=4 SV=1
Length = 263

Score = 58.5 bits (140), Expect = 2e-07
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAF 164
W+V +P T V M +GPAA +++G +TL + L G G++ R LLRE+ AA LNA+
Sbjct: 154 WKVVTPNTTVAMAFGPAAAQRYGPDMTLREALDGRGDMYRTLLREATAALLNAY 207


>tr|A3A255|A3A255_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_004877 PE=4 SV=1
Length = 355

Score = 58.5 bits (140), Expect = 2e-07
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +3

Query: 3 WRVWSPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAF 164
W+V +P T V M +GPAA +++G +TL + L G G++ R LLRE+ AA LNA+
Sbjct: 246 WKVVTPNTTVAMAFGPAAAQRYGPDMTLREALDGRGDMYRTLLREATAALLNAY 299