BP912603 |
Clone id |
YMU001_000020_G10 |
Library |
YMU01 |
Length |
384 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000020_G10. |
Accession |
BP912603 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2177Contig1 |
Sequence |
ATTGGAGAGTGTGGTCACCAAAGACTAAGGTTGGAATGTGGTATGGGCCAGCAGCGACCA AAAAGTTTGGGTCCACCCTTACCCTTGAGCAAGGGCTGCGGGGATCGGGTGAAATTAACC GTGTGCTGCTTCGGGAAAGCATTGCTGCTACTCTCAATGCTTTCAACAGTCTGCCCTTCT ACTATAATGCTATTGAGGTGAGCACGGATGTAGTGAAGTAGATGGTATTTAATGGATGCA GAGTAGAGGGCAAGGAAAATAGCATGAAGTATAGGTTTTATCTAAGGGCAAGAAAGTGTA TATTTGAATGTGATATGTTGTTCATCATGGCATACTATTAGGGAACATATTTTAATAGTC AAATTGTGTGTGTGTGTGTACACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54SK3 |
Definition |
sp|Q54SK3|Y2417_DICDI Probable serine/threonine-protein kinase DDB_G0282417 OS=Dictyostelium discoideum |
Align length |
48 |
Score (bit) |
33.1 |
E-value |
0.43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912603|Adiantum capillus-veneris mRNA, clone: YMU001_000020_G10. (384 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q54SK3|Y2417_DICDI Probable serine/threonine-protein kinase D... 33 0.43 sp|Q5UP65|YR598_MIMIV Putative ankyrin repeat protein R598 OS=Ac... 30 3.7 sp|P59151|RR4_WOORA 30S ribosomal protein S4, chloroplastic OS=W... 29 6.3 sp|A6W376|RL18_MARMS 50S ribosomal protein L18 OS=Marinomonas sp... 29 6.3 sp|Q568E2|ZN750_DANRE Protein ZNF750 OS=Danio rerio GN=znf750 PE... 29 8.2 sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chlorop... 29 8.2 sp|P11159|PBAN_HELZE PBAN-type neuropeptides OS=Heliothis zea PE... 29 8.2 sp|O18641|PBAN_HELAU PBAN-type neuropeptides OS=Helicoverpa assu... 29 8.2 sp|Q95267|GCR_TUPGB Glucocorticoid receptor OS=Tupaia glis belan... 29 8.2 sp|Q9YGL3|NR2E1_ORYLA Nuclear receptor subfamily 2 group E membe... 29 8.4 sp|P15801|DPOG_YEAST DNA polymerase gamma OS=Saccharomyces cerev... 29 8.4
>sp|Q54SK3|Y2417_DICDI Probable serine/threonine-protein kinase DDB_G0282417 OS=Dictyostelium discoideum GN=DDB_G0282417 PE=3 SV=1 Length = 528
Score = 33.1 bits (74), Expect = 0.43 Identities = 18/48 (37%), Positives = 31/48 (64%) Frame = -2
Query: 281 IKPILHAIFLALYSASIKYHLLHYIRAHLNSIIVEGQTVESIESSSNA 138 IKPI++A+ +ALYS +I+ + H+ H N I V T+++ +S S + Sbjct: 242 IKPIINAMVIALYSVNIEKNYTHFDLNHGN-IFVNIHTLDTCQSISGS 288
>sp|Q5UP65|YR598_MIMIV Putative ankyrin repeat protein R598 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R598 PE=4 SV=1 Length = 304
Score = 30.0 bits (66), Expect = 3.7 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Frame = +3
Query: 54 ATKKFGSTLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFYYNAIEVSTDVVK*MVFN 233 +TK GS +++ G ++ + L +NA N LP Y + D VK +V N Sbjct: 117 STKYLGSNHYIKEN-PGQDTLSLLRLLIEYGVDVNAHNYLPLYSAVSSKNFDKVKLLVEN 175
Query: 234 GCRV----EGKENSMKYR 275 G V G ENS ++ Sbjct: 176 GANVLRVANGNENSFYFK 193
>sp|P59151|RR4_WOORA 30S ribosomal protein S4, chloroplastic OS=Woodwardia radicans GN=rps4 PE=3 SV=1 Length = 185
Score = 29.3 bits (64), Expect = 6.3 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +3
Query: 75 TLTLEQGLRGSGEINRVLLRESIAATLNAFNSLPFY 182 T +L +G R +G +NR+ RES++ +N + +Y Sbjct: 146 TASLSEGSRPTGLVNRIANRESVSLNINELLVVEYY 181
>sp|A6W376|RL18_MARMS 50S ribosomal protein L18 OS=Marinomonas sp. (strain MWYL1) GN=rplR PE=3 SV=1 Length = 116
Score = 29.3 bits (64), Expect = 6.3 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 11/79 (13%) Frame = +3
Query: 15 SPKTKVGMWYGPAATKKFGSTLTLEQGLRGSGEINRVLLRE----------SIAATLNAF 164 +P+ P +K S TLE+ LRGS N+V +E + T AF Sbjct: 32 TPRHMYAQVISPCGSKVLASASTLEEALRGSATGNKVAAKEVGTLIATRAKAAGVTSVAF 91
Query: 165 NSLPF-YYNAIEVSTDVVK 218 + F Y+ ++V D + Sbjct: 92 DRSGFKYHGRVQVLADAAR 110
>sp|Q568E2|ZN750_DANRE Protein ZNF750 OS=Danio rerio GN=znf750 PE=2 SV=1 Length = 607
Score = 28.9 bits (63), Expect = 8.2 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Frame = -2
Query: 278 KPILHAIFLALYSASIKYHLLHYIRAHL--NSIIVEGQTVESIESSSNAFPKQHTVNFTR 105 KP + F ++ +IK HL ++++ +L NSI + Q +E +S A QH+ F+ Sbjct: 21 KPFKYQCFQCPFTCNIKSHLFNHMKYNLCKNSISLVSQRMEQTGKASRA--SQHSPAFSH 78
Query: 104 S 102 + Sbjct: 79 N 79
>sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis thaliana GN=OMR1 PE=1 SV=1 Length = 592
Score = 28.9 bits (63), Expect = 8.2 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3
Query: 142 MLSRSSTRLISPDPRSPCSRVRVDPNFL 59 +LSR T + P P+ P R++V PN L Sbjct: 40 VLSRDETSMTPPPPKLPLPRLKVSPNSL 67
>sp|P11159|PBAN_HELZE PBAN-type neuropeptides OS=Heliothis zea PE=1 SV=2 Length = 194
Score = 28.9 bits (63), Expect = 8.2 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Frame = +3
Query: 27 KVGMWYGPAATKKFGSTLTLEQGLRGSGEINR---VLLRESIAATLNAFNSLPFYYNAIE 197 ++G+W+GP K+ LR S E NR L E+ A ++ LP+ A E Sbjct: 38 RLGLWFGPRLGKR---------SLRISTEDNRQAFFKLLEAADALKYYYDQLPYEMQADE 88
Query: 198 VSTDVVK*MVF 230 T V K ++F Sbjct: 89 PETRVTKKVIF 99
>sp|O18641|PBAN_HELAU PBAN-type neuropeptides OS=Helicoverpa assulta GN=PBAN PE=2 SV=1 Length = 194
Score = 28.9 bits (63), Expect = 8.2 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Frame = +3
Query: 27 KVGMWYGPAATKKFGSTLTLEQGLRGSGEINR---VLLRESIAATLNAFNSLPFYYNAIE 197 ++G+W+GP K+ LR S E NR L E+ A ++ LP+ A E Sbjct: 38 RLGLWFGPRLGKR---------SLRISTEDNRQAFFKLLEAADALKYYYDQLPYEMQADE 88
Query: 198 VSTDVVK*MVF 230 T V K ++F Sbjct: 89 PETRVTKKVIF 99
>sp|Q95267|GCR_TUPGB Glucocorticoid receptor OS=Tupaia glis belangeri GN=NR3C1 PE=2 SV=1 Length = 776
Score = 28.9 bits (63), Expect = 8.2 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = +3
Query: 30 VGMWYGPAATKKFGSTLTLEQGLR---GSGEINRVLLRESIAATLNAFNSLP 176 +G++ G TK G+ L Q + SGE N LL ESI A LN S+P Sbjct: 86 MGLYMGETETKVMGNDLGFPQQGQITLSSGETNLQLLEESI-ANLNRSTSVP 136
>sp|Q9YGL3|NR2E1_ORYLA Nuclear receptor subfamily 2 group E member 1 OS=Oryzias latipes GN=nr2e1 PE=2 SV=1 Length = 396
Score = 28.9 bits (63), Expect = 8.4 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +1
Query: 124 CCFGKALLLLSMLSTVCPSTI 186 C FGK LLLL L +V PSTI Sbjct: 349 CRFGKLLLLLPALRSVSPSTI 369
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PG40 |
Definition |
tr|A9PG40|A9PG40_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
68 |
Score (bit) |
66.6 |
E-value |
6.0e-10 |
Report |
|