BP912610 |
Clone id |
YMU001_000020_H05 |
Library |
YMU01 |
Length |
484 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000020_H05. |
Accession |
BP912610 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL466Contig1 |
Sequence |
GCAGAGCAGAACGGGGAAGGGATGTCTTGGGCAGCGGTGATTCCGGTGTCCGCGCTGCCC AAGGGTGAGCGCAGGTTAGTGCGTCAGGACGACCAGGATGTACTCCTACTCTGGTACAAA GGTGAGGTAGTAGCCATTGAGAACACATCGCCTGCGGAAGGTGCCTACAGCGAGGGTTTT GTCAATGCCAAACTTACGCAGGATGGCTGCATTGTTTGCCCTTCCACAGAGAGCACCTTT GACTTGAAGACTGGAGAGATCAAAGAGTGGTTTCCCTCAAATCCTGTGTTGAGGTTGCTG ACCCCCCCTCTGAGGAAATTAACTACGTATCCTGTCAAGATTGACTCGGATTACATTTAT ATCAGCACACAGTCCTCCTCCTCTGTGGACTCTGCAGAGATTGTCTTTGGTGGGCAGGTA CAAGCAGGCAGAAGCGCTCCTAATGTAGAGGTGGAAGAGGTGAGGATGGTCGTGGATGAA GGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3U3T8 |
Definition |
sp|Q3U3T8|WDR62_MOUSE WD repeat-containing protein 62 OS=Mus musculus |
Align length |
82 |
Score (bit) |
33.1 |
E-value |
0.68 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNL5 |
Definition |
tr|B8LNL5|B8LNL5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
142 |
Score (bit) |
160.0 |
E-value |
2.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912610|Adiantum capillus-veneris mRNA, clone: YMU001_000020_H05. (484 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNL5|B8LNL5_PICSI Putative uncharacterized protein OS=Picea... 160 2e-38 tr|Q9C9I7|Q9C9I7_ARATH Putative uncharacterized protein F26A9.12... 159 6e-38 tr|B4FJL4|B4FJL4_MAIZE Putative uncharacterized protein OS=Zea m... 159 8e-38 tr|B6U301|B6U301_MAIZE Rieske domain containing protein OS=Zea m... 157 2e-37 tr|A7PPZ6|A7PPZ6_VITVI Chromosome chr18 scaffold_24, whole genom... 156 4e-37 tr|Q53N80|Q53N80_ORYSJ Os11g0242400 protein OS=Oryza sativa subs... 155 7e-37 tr|A2ZCZ7|A2ZCZ7_ORYSI Putative uncharacterized protein OS=Oryza... 155 7e-37 tr|A5C791|A5C791_VITVI Putative uncharacterized protein OS=Vitis... 154 2e-36 tr|A9TN65|A9TN65_PHYPA Predicted protein (Fragment) OS=Physcomit... 146 6e-34 tr|A7QHV1|A7QHV1_VITVI Chromosome undetermined scaffold_100, who... 108 1e-22 tr|A4RVD0|A4RVD0_OSTLU Predicted protein (Fragment) OS=Ostreococ... 106 5e-22 tr|Q01BP0|Q01BP0_OSTTA Rieske (ISS) OS=Ostreococcus tauri GN=Ot0... 105 8e-22 tr|A8J4Q7|A8J4Q7_CHLRE Rieske [2Fe-2S] protein OS=Chlamydomonas ... 99 1e-19 tr|A5BKA0|A5BKA0_VITVI Putative uncharacterized protein OS=Vitis... 78 2e-13 tr|A3IQW7|A3IQW7_9CHRO Rieske (2Fe-2S) region OS=Cyanothece sp. ... 61 3e-08 tr|B1WRW3|B1WRW3_CYAA5 Putative uncharacterized protein OS=Cyano... 60 5e-08 tr|B7K3M9|B7K3M9_SYNP8 Rieske (2Fe-2S) domain protein OS=Synecho... 59 9e-08 tr|B4C1K4|B4C1K4_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 59 9e-08 tr|B7KFC2|B7KFC2_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 58 2e-07 tr|B4AXJ6|B4AXJ6_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 57 3e-07 tr|A0ZMK5|A0ZMK5_NODSP Rieske (2Fe-2S) region protein OS=Nodular... 55 2e-06 tr|B0C5T4|B0C5T4_ACAM1 Rieske, 2Fe-2S protein, putative OS=Acary... 50 4e-05 tr|A8YKW3|A8YKW3_MICAE Genome sequencing data, contig C325 OS=Mi... 49 9e-05 tr|B0JJI9|B0JJI9_MICAN Putative uncharacterized protein OS=Micro... 47 5e-04 tr|B2J316|B2J316_NOSP7 Rieske (2Fe-2S) domain protein OS=Nostoc ... 47 6e-04 tr|Q8YYC9|Q8YYC9_ANASP All0921 protein OS=Anabaena sp. (strain P... 45 0.001 tr|Q3M4G6|Q3M4G6_ANAVT Rieske (2Fe-2S) region OS=Anabaena variab... 45 0.001 tr|Q5X0Y2|Q5X0Y2_LEGPA Putative uncharacterized protein OS=Legio... 44 0.005 tr|A5II86|A5II86_LEGPC Putative uncharacterized protein OS=Legio... 44 0.005 tr|Q5WSR2|Q5WSR2_LEGPL Putative uncharacterized protein OS=Legio... 43 0.007
>tr|B8LNL5|B8LNL5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 302
Score = 160 bits (406), Expect = 2e-38 Identities = 78/142 (54%), Positives = 96/142 (67%), Gaps = 1/142 (0%) Frame = +1
Query: 16 EGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKL 195 + +W V+P SALPKGE WYK EVVAIEN SPAEGAYSEG VNAKL Sbjct: 91 DNKNWVPVVPASALPKGERRLIRQDGDNILLLWYKNEVVAIENKSPAEGAYSEGLVNAKL 150
Query: 196 TQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYIST-Q 372 TQDGCI+CP+T+STF+LKTG+I+EW+P+NPV YP K+DS+YIYIS + Sbjct: 151 TQDGCIMCPTTDSTFNLKTGDIEEWYPNNPVLRLLTPPIRKLFVYPTKVDSEYIYISMGR 210
Query: 373 SSSSVDSAEIVFGGQVQAGRSA 438 + + D EIVF G+ QAG +A Sbjct: 211 AGGTEDPTEIVFSGKTQAGITA 232
>tr|Q9C9I7|Q9C9I7_ARATH Putative uncharacterized protein F26A9.12 (Putative uncharacterized protein At1g71500) (Putative uncharacterized protein) (Putative uncharacterized protein At1g71500/F26A9_12) OS=Arabidopsis thaliana GN=At1g71500/F26A9_12 PE=2 SV=1 Length = 287
Score = 159 bits (402), Expect = 6e-38 Identities = 78/143 (54%), Positives = 94/143 (65%), Gaps = 1/143 (0%) Frame = +1
Query: 19 GMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKLT 198 G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NA+LT Sbjct: 78 GRNWVPVVPLSALPKGERRVVIQDDETILLLWYKNDVFAIENRSPAEGAYSEGLLNARLT 137
Query: 199 QDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQSS 378 QDGCIVCPST+STFDL+TGEI+EW+P NPV YPVK D + IYIS + S Sbjct: 138 QDGCIVCPSTDSTFDLRTGEIREWYPKNPVLRVLTPALRKLFVYPVKYDEENIYISIRDS 197
Query: 379 SSVD-SAEIVFGGQVQAGRSAPN 444 + +AEIVF G+ Q G +A N Sbjct: 198 GKTEAAAEIVFSGKAQPGLTATN 220
>tr|B4FJL4|B4FJL4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 276
Score = 159 bits (401), Expect = 8e-38 Identities = 77/142 (54%), Positives = 92/142 (64%) Frame = +1
Query: 13 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 192 G G SW V+P++ALP+GE WYK +V AIEN SPAEGAY+EG +NAK Sbjct: 66 GGGASWVPVVPLAALPRGERRVIVQDGEEILLLWYKNQVFAIENRSPAEGAYTEGLLNAK 125
Query: 193 LTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 372 LTQDGCIVCPST+STFDL+TGEIKEW+P NPV Y VK D + IYIS Sbjct: 126 LTQDGCIVCPSTDSTFDLRTGEIKEWYPKNPVLRALTPALRKLFTYRVKTDEENIYISFS 185
Query: 373 SSSSVDSAEIVFGGQVQAGRSA 438 + SAEI+F G+VQ G +A Sbjct: 186 GADGAGSAEIIFSGKVQPGVTA 207
>tr|B6U301|B6U301_MAIZE Rieske domain containing protein OS=Zea mays PE=2 SV=1 Length = 276
Score = 157 bits (397), Expect = 2e-37 Identities = 76/142 (53%), Positives = 91/142 (64%) Frame = +1
Query: 13 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 192 G G SW V+P++ALP+GE WYK +V AIEN SPAEGAY+EG +NAK Sbjct: 66 GGGASWVPVVPLAALPRGERRVIVQDGEEILLLWYKNQVFAIENRSPAEGAYTEGLLNAK 125
Query: 193 LTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 372 LTQDGCIVCPST+STFDL+TGEIKEW+P NPV Y VK D + IYIS Sbjct: 126 LTQDGCIVCPSTDSTFDLRTGEIKEWYPKNPVLRALTPALRKLFTYRVKTDEENIYISFS 185
Query: 373 SSSSVDSAEIVFGGQVQAGRSA 438 + SAEI+F G+ Q G +A Sbjct: 186 GADGAGSAEIIFSGKAQPGVTA 207
>tr|A7PPZ6|A7PPZ6_VITVI Chromosome chr18 scaffold_24, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021852001 PE=4 SV=1 Length = 280
Score = 156 bits (395), Expect = 4e-37 Identities = 79/143 (55%), Positives = 92/143 (64%), Gaps = 1/143 (0%) Frame = +1
Query: 13 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 192 G+G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAK Sbjct: 69 GDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAYSEGLLNAK 128
Query: 193 LTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 372 LTQDGCIVCP+T+STFDL+TGEIK+W+P NPV YPVK D IYI Sbjct: 129 LTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTPALRTLFIYPVKTDDKNIYIRMS 188
Query: 373 SSSSVD-SAEIVFGGQVQAGRSA 438 S D SAEIVF G+ Q G +A Sbjct: 189 GGVSSDASAEIVFSGKAQPGLTA 211
>tr|Q53N80|Q53N80_ORYSJ Os11g0242400 protein OS=Oryza sativa subsp. japonica GN=Os11g0242400 PE=2 SV=1 Length = 277
Score = 155 bits (393), Expect = 7e-37 Identities = 77/146 (52%), Positives = 100/146 (68%), Gaps = 1/146 (0%) Frame = +1
Query: 4 EQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFV 183 E +G+G +W V+P++ALP+GE WYK +V A+EN SPAEGAY+EG + Sbjct: 63 EASGDG-NWVPVVPLAALPRGERRVIVQDGEEILLLWYKEQVYAVENRSPAEGAYTEGLL 121
Query: 184 NAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYI 363 NAKLTQDGCIVCP+T+STFDL+TGEIKEW+P+NPV YPVKID + IYI Sbjct: 122 NAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPNNPVLRALTPALRKLFVYPVKIDGENIYI 181
Query: 364 STQSS-SSVDSAEIVFGGQVQAGRSA 438 S + + +S SAEI+F G+ Q G +A Sbjct: 182 SIKGAVTSGGSAEIIFSGKAQPGFTA 207
>tr|A2ZCZ7|A2ZCZ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35659 PE=4 SV=1 Length = 277
Score = 155 bits (393), Expect = 7e-37 Identities = 77/146 (52%), Positives = 100/146 (68%), Gaps = 1/146 (0%) Frame = +1
Query: 4 EQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFV 183 E +G+G +W V+P++ALP+GE WYK +V A+EN SPAEGAY+EG + Sbjct: 63 EASGDG-NWVPVVPLAALPRGERRVIVQDGEEILLLWYKEQVYAVENRSPAEGAYTEGLL 121
Query: 184 NAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYI 363 NAKLTQDGCIVCP+T+STFDL+TGEIKEW+P+NPV YPVKID + IYI Sbjct: 122 NAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPNNPVLRALTPALRKLFVYPVKIDGENIYI 181
Query: 364 STQSS-SSVDSAEIVFGGQVQAGRSA 438 S + + +S SAEI+F G+ Q G +A Sbjct: 182 SIKGAVTSGGSAEIIFSGKAQPGFTA 207
>tr|A5C791|A5C791_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018103 PE=4 SV=1 Length = 326
Score = 154 bits (389), Expect = 2e-36 Identities = 79/143 (55%), Positives = 92/143 (64%), Gaps = 1/143 (0%) Frame = +1
Query: 13 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 192 G+G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAK Sbjct: 69 GDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAYSEGLLNAK 128
Query: 193 LTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 372 LTQDGCIVCP+T+STFDL+TG IK+W+P NPV YPVK D IYI Sbjct: 129 LTQDGCIVCPTTDSTFDLQTGXIKDWYPKNPVLRVLXPALRTLFIYPVKTDDKNIYIRMS 188
Query: 373 SSSSVD-SAEIVFGGQVQAGRSA 438 S D SAEIVF G+ Q G +A Sbjct: 189 GGVSSDASAEIVFSGKAQPGLTA 211
>tr|A9TN65|A9TN65_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_46753 PE=4 SV=1 Length = 222
Score = 146 bits (368), Expect = 6e-34 Identities = 73/142 (51%), Positives = 91/142 (64%), Gaps = 2/142 (1%) Frame = +1
Query: 25 SWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKLTQD 204 +W VIP++ALP+GE WYK +V AIEN SPAEGAYSEG +NA+LT D Sbjct: 19 NWVPVIPLAALPRGERRLVRQDGETVLLLWYKNDVYAIENQSPAEGAYSEGLINARLTPD 78
Query: 205 GCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQSSSS 384 GCIVCPSTEST+DLK+G++KEW P+NPV YPVK++ + IYI+ + Sbjct: 79 GCIVCPSTESTYDLKSGKVKEWMPTNPVLRVLTPSLRDLVTYPVKVEDESIYINVRGGG- 137
Query: 385 VDSAEIVFGGQV--QAGRSAPN 444 AEIVFGG AGR+A N Sbjct: 138 --YAEIVFGGAASGNAGRTATN 157
>tr|A7QHV1|A7QHV1_VITVI Chromosome undetermined scaffold_100, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013807001 PE=4 SV=1 Length = 149
Score = 108 bits (270), Expect = 1e-22 Identities = 50/81 (61%), Positives = 59/81 (72%) Frame = +1
Query: 13 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 192 G+G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAK Sbjct: 69 GDGENWVPVVPLSALPKGERRVIIQDTETILLLWYKDQVYAIENRSPAEGAYSEGLLNAK 128
Query: 193 LTQDGCIVCPSTESTFDLKTG 255 LTQDGCIVCP+T+S FDL+TG Sbjct: 129 LTQDGCIVCPTTDSIFDLQTG 149
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