BP912624
Clone id YMU001_000021_A08
Library
Length 246
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGACCGCATCGGGCCCTCCGGTGCCCTCGTTTGATTACAAGTGAGTGTGAAGCATGCGAA
CGAGTTTGCGGGATGAAGAACTGATCTGTATAATTTCAAGGTGAGGATCTTTGCTTCGGG
CTGTAACTGCCACAGAGCCCTTGATATGTGCACTTGTTACATACTGCAAACAAACTCTTT
CTGAGTATGGAGTAACTTAAAAATGCTCGTGCGCGCAATGCTATGATGTGCCGTCAAGAG
GGAATG
■■Homology search results ■■ -
sp_hit_id Q9H6R4
Definition sp|Q9H6R4|NOL6_HUMAN Nucleolar protein 6 OS=Homo sapiens
Align length 46
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912624|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_A08.
(246 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9H6R4|NOL6_HUMAN Nucleolar protein 6 OS=Homo sapiens GN=NOL6... 30 2.9

>sp|Q9H6R4|NOL6_HUMAN Nucleolar protein 6 OS=Homo sapiens GN=NOL6
PE=1 SV=2
Length = 1146

Score = 30.4 bits (67), Expect = 2.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3

Query: 220 HCAHEHF*VTPYSERVCLQYVTSAHIKGSVAVTARSKDPHLEIIQI 83
H AH H P VC Y H+K S+ + R KD L +++
Sbjct: 209 HLAH-HLAQDPLFGSVCFSYTNGCHLKPSLLLRPRGKDERLVTVRL 253


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912624|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_A08.
(246 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******