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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912625
Clone id YMU001_000021_A09
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACCAAAATGCATATTGTAGGTATACATGCTACCTTGGTAACAACTAAAGATGTAGTGCG
TAGTGTCTCCAAGGTTTTCTCAATCTTAGAACCAATCTTAGATAGAACTGGAAGGTACTC
TCTCCTCAAGCCAAAGAATCAAACCAAAATAGAAAAATTTGCTTCCTCAACAAGAACATT
AAAAGGTGGGTCAAAACCATGACACCACGATAAAAAATGAGCCTTGATTACATGGATGGT
CAATGCGCTCATCAAAAGGACCTTGGAAGCCATCTTGAGAGTCTCAAACTCGATCTAGTA
GTATCAATATCTGAGGAGTCGAATGTCAATGATCTTTCCCACCTTTGCAAGAATGTGGGC
TTGGAGGAGGTTGTGCACCTTGCCTATGTTGGGTCGAACGCCGATAATCTTGCAGATGCT
AGAGGTGGCTTGAAGGTGCTCCACCTCTACTAAAAGGCTTGCTTGCTCTATCGATGATA
■■Homology search results ■■ -
sp_hit_id P32798
Definition sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces cerevisiae
Align length 74
Score (bit) 31.6
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912625|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_A09.
         (479 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces...    32   1.9  
sp|O42900|PPK19_SCHPO Serine/threonine-protein kinase ppk19 OS=S...    30   5.6  
sp|P43810|ISPZ_HAEIN Probable intracellular septation protein OS...    30   5.6  
sp|A5UHX7|ISPZ_HAEIG Probable intracellular septation protein OS...    30   5.6  
sp|A5UDP8|ISPZ_HAEIE Probable intracellular septation protein OS...    30   5.6  
sp|Q4QM74|ISPZ_HAEI8 Probable intracellular septation protein OS...    30   5.6  
sp|Q6GQI5|CCD93_XENLA Coiled-coil domain-containing protein 93 O...    30   7.4  

>sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces
           cerevisiae GN=COT1 PE=1 SV=2
          Length = 439

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 2   TKMHIVGIHATLVTTKDVVRSVSKVF--SILEPILDRTGRYSLLKPKNQTKIEKFASSTR 175
           T  H+ GI  T  T  D   ++S++   +I++  ++   R  LL P+N +K   +++S+ 
Sbjct: 166 THAHVDGIENT--TPMDSTDNISEIMPNAIVDSFMNENTR--LLTPENASKTPSYSTSSH 221

Query: 176 TLKGGSKP*HHDKK 217
           T+  G     H+K+
Sbjct: 222 TIASGGNYTEHNKR 235


>sp|O42900|PPK19_SCHPO Serine/threonine-protein kinase ppk19
           OS=Schizosaccharomyces pombe GN=ppk19 PE=1 SV=1
          Length = 1706

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -3

Query: 279 LKMASKVLLMSALTIHVIKAHFLSWCHGFDPPFNVLVEEANFSILV*FFGLRREYLP 109
           L++  K  +M  L   +   H L  CHG     N+L+   N++ L  F   +  YLP
Sbjct: 118 LELTEKKWIMFQLLKGISDCHRLGVCHGDIKSENILITSWNWAYLSDFSSFKPTYLP 174


>sp|P43810|ISPZ_HAEIN Probable intracellular septation protein
           OS=Haemophilus influenzae GN=ispZ PE=3 SV=1
          Length = 185

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 381 KVHNLLQAHILAKVGKIIDIRLLRY*YY*IEFETLKMASKVLLMSALTIHVIKAHFLSW 205
           K+  + +A I+  V  I+ I +L++ Y  +E +   MAS V+    LT +  +  +L W
Sbjct: 18  KLGGVREAAIVLVVATILQIVILKWKYGMVEKQQKIMASAVVFFGLLTAYFNEIRYLQW 76


>sp|A5UHX7|ISPZ_HAEIG Probable intracellular septation protein
           OS=Haemophilus influenzae (strain PittGG) GN=ispZ PE=3
           SV=1
          Length = 185

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 381 KVHNLLQAHILAKVGKIIDIRLLRY*YY*IEFETLKMASKVLLMSALTIHVIKAHFLSW 205
           K+  + +A I+  V  I+ I +L++ Y  +E +   MAS V+    LT +  +  +L W
Sbjct: 18  KLGGVREAAIVLVVATILQIVILKWKYGMVEKQQKIMASAVVFFGLLTAYFNEIRYLQW 76


>sp|A5UDP8|ISPZ_HAEIE Probable intracellular septation protein
           OS=Haemophilus influenzae (strain PittEE) GN=ispZ PE=3
           SV=1
          Length = 185

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 381 KVHNLLQAHILAKVGKIIDIRLLRY*YY*IEFETLKMASKVLLMSALTIHVIKAHFLSW 205
           K+  + +A I+  V  I+ I +L++ Y  +E +   MAS V+    LT +  +  +L W
Sbjct: 18  KLGGVREAAIVLVVATILQIVILKWKYGTVEKQQKIMASAVVFFGLLTAYFNEIRYLQW 76


>sp|Q4QM74|ISPZ_HAEI8 Probable intracellular septation protein
           OS=Haemophilus influenzae (strain 86-028NP) GN=ispZ PE=3
           SV=1
          Length = 185

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 381 KVHNLLQAHILAKVGKIIDIRLLRY*YY*IEFETLKMASKVLLMSALTIHVIKAHFLSW 205
           K+  + +A I+  V  I+ I +L++ Y  +E +   MAS V+    LT +  +  +L W
Sbjct: 18  KLGGVREAAIVLVVATILQIVILKWKYGIVEKQQKIMASAVVFFGLLTAYFNEIRYLQW 76


>sp|Q6GQI5|CCD93_XENLA Coiled-coil domain-containing protein 93
           OS=Xenopus laevis GN=ccdc93 PE=2 SV=1
          Length = 609

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +1

Query: 151 RKICFLNKNIKRWVKTMTPR*KMSLDYMDGQCAHQKDL---GSHLESLKLDLVVSISEES 321
           RK+  LNK I +  K +    + + +   G C  +K L    SH+E+L+ +L+V    ES
Sbjct: 310 RKVASLNKQIGQRKKLLDQLQEKASELQSGSCEAKKQLTEVTSHMENLEQELLVLEKVES 369

Query: 322 NVN 330
             +
Sbjct: 370 KAD 372
tr_hit_id Q1NVB3
Definition tr|Q1NVB3|Q1NVB3_9DELT Endonuclease OS=delta proteobacterium MLMS-1
Align length 74
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912625|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_A09.
         (479 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1NVB3|Q1NVB3_9DELT Endonuclease OS=delta proteobacterium MLM...    35   1.4  
tr|B6KE99|B6KE99_TOXGO Putative uncharacterized protein OS=Toxop...    33   7.0  

>tr|Q1NVB3|Q1NVB3_9DELT Endonuclease OS=delta proteobacterium MLMS-1
           GN=MldDRAFT_0595 PE=4 SV=1
          Length = 884

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 22/74 (29%), Positives = 38/74 (51%)
 Frame = +1

Query: 226 DYMDGQCAHQKDLGSHLESLKLDLVVSISEESNVNDLSHLCKNVGLEEVVHLAYVGSNAD 405
           D++ G CAHQ      ++S  ++ ++SISE     D+  + KN G E   HL     +++
Sbjct: 707 DFLRGFCAHQDF--EDMKSAVINYLLSISENHPTGDVLLISKNSGQETKYHLGAQERSSE 764

Query: 406 NLADARGGLKVLHL 447
             A ++  LK L +
Sbjct: 765 GWAGSKWTLKKLRV 778


>tr|B6KE99|B6KE99_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_024980 PE=4 SV=1
          Length = 1038

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 451 SRGGAPSSHL*HLQDYRRSTQHRQGAQPPPSP 356
           SRGG PSSH  H   +  S+   Q + PPP P
Sbjct: 859 SRGGPPSSHPSHTASFLSSSSSPQTSSPPPVP 890